Desulfoscipio gibsoniae: Desgi_3539
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Entry
Desgi_3539 CDS
T02657
Name
(GenBank) type IV secretory pathway, VirD4 component
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Desgi_3539
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AGL02862
UniProt:
R4KMS1
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Position
complement(3549757..3551574)
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AA seq
605 aa
AA seq
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MKTSQIIILISAGLTMFGVIGLLSLIAHYYTLNGIKSKTVGDGQHGTARWATKQEIKKTY
SEVPYEPEKWRKGESLPKAQGLIVGWRKASLFDDAAPHGYALVDDNDIHCLMIGAAGVGK
TANFLYPNLEYACAGGMSFVTTDTKGDLYRNYAGIAKEHYGYDVAVIDLRNPTRSDGNNL
LHLVNRYMDAYLKNPENLAYKAKAEKYAKITAKTIISSGGFDSAMAGQNAFFYDAAEGLL
TSVILLIAEYCEPKQRHIVSVFKLIQDLLAPSGVKGRTLFQLLLAHLPDTHKTKWFAGAA
LNSAEQAMQSVLSTALSRLNAFLDSEMEQILCFDTAIDAEKFCTKKSAIFLVMPEEDNTK
YFIISLIVQQLYREILSVADEHGGKLTNRVMMFLDEIGTIPKIESAEMMFSASRSRRVSI
VAIIQSFAQLEKNYGREGSAIIIDNCQDTVFGGFAPNSESAQILSKAMGSKTVMSGSVSR
GKNDPSQSLQMIERPLMTPDELKAMPKGHFIVTKTGAYPMRTRLKLFKEWGITFGKPYEI
AEQSAREVEYADRRRVEEEIIRRHSACVDVMEEAEAGAAASGGLLHSPIQGPEAPVRTKA
PVRIE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacatcacaaatcatcatcctgatttctgccggactgaccatgttcggcgttatt
gggctgttgtcgctcatagcgcattactacactttaaacggcattaaaagcaaaacagta
ggagacggtcagcacggtacggcccgttgggcgacaaagcaggagataaaaaagacatat
tccgaagtgccgtatgaaccggagaaatggcgcaagggagaaagcctgccgaaagcgcag
ggactcatagtcggctggaggaaagcgtcgctgtttgacgatgccgcacctcacggatac
gcgctggtggatgataatgatatccactgcctgatgataggagcggctggcgtcggtaag
accgccaactttctctatcccaatcttgaatacgcctgcgctggtggtatgagcttcgtg
actaccgacaccaagggggatctctaccgcaactacgccggtatcgcaaaggagcattac
ggatatgatgtggccgtcatcgacctgagaaatcccacccgctcggacggaaacaatctg
ctccatttggtcaatcgctatatggatgcttacctgaaaaatccggagaaccttgcgtac
aaggccaaagcggagaagtatgccaagatcaccgccaagaccatcatatcctccggaggc
tttgattctgctatggctggacaaaacgctttcttctatgacgcggcggaaggtctgctg
acctctgtcatcctgctcatcgcggaatactgcgagccgaagcagcggcacatcgtgtcg
gtgtttaagctcattcaggatctgctggctcccagcggagtcaagggcaggacattattc
cagctgctcctggcacatctgcccgatacgcataaaacaaagtggtttgctggagcggca
ctcaactctgcggagcaggctatgcaaagtgttctatccacggctctctccagactcaac
gcttttctggattccgagatggagcagatactgtgctttgatacagccattgacgcggag
aaattctgtacaaagaaaagcgccatctttctcgttatgccggaggaagataacacaaag
tattttatcatcagcctgatcgtccagcagctctaccgtgagattctatcggtggccgac
gagcatggcggaaagctcaccaaccgcgtgatgatgttccttgatgaaatcggaactata
ccaaaaatagagtctgccgaaatgatgttcagcgccagccgctcacgccgggtgtccatc
gttgctatcatacagagctttgcacagctggagaaaaactatggcagagagggttcagcc
atcatcatcgacaactgccaggacacggtgttcggcggctttgctcccaatagtgaatca
gcgcagattttatcaaaagccatgggaagcaagaccgttatgagcggctcggtcagccgg
gggaaaaacgatccgtcgcagagtctgcagatgatcgagcggccactgatgactccagac
gagttaaaggctatgcctaaaggccactttatcgtcactaaaaccggggcatatccgatg
cgtactcggctgaaacttttcaaggaatggggtattacctttggcaagccttatgaaatt
gcagaacaatctgccagggaggtggagtatgccgacaggcgcagagtagaggaagaaatc
atccgccgacactctgcctgcgtggatgtgatggaggaagctgaagctggtgcagccgca
tctggcggattacttcactcaccgattcaggggccggaagcgcctgtcaggacaaaagcg
cctgttaggattgaatag
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