Desulfoscipio gibsoniae: Desgi_3575
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Entry
Desgi_3575 CDS
T02657
Name
(GenBank) putative S-layer protein
KO
K20276
large repetitive protein
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desgi_3575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
LacZ_4
PKD_4
PKD
Tail_tube
Motif
Other DBs
NCBI-ProteinID:
AGL02898
UniProt:
R4KI67
LinkDB
All DBs
Position
complement(3579735..3584363)
Genome browser
AA seq
1542 aa
AA seq
DB search
MKKKGKRIAIITLALLLLICGGIYTAYRLHPESFIGQDEIITRGEYAAIMAQDMQLDTSN
TEKEPPSFPDIDDHWSEKYIESLIDAGIIDPADYPDGFHPDDPITRAEIVKMLVRAEDKD
EEAKNTQGHSGYDDQSDIKEDDKGYVIIGREDGIIGDTDDNKIRPNDPVTKGDAEDMIDK
ITPKPTEPTAPAQTPDTTAPSPTPGATEQPTPTPASPDPDKPTPSPTPAPTPGNTGGGSG
GSGGGGGTYYPPAQVRFELPEMAHTDSEIKIMPVWKYMKSYTWTLTKTAVDGSQQPVELA
DAVTGFLGLEGGAIQFKEDGQYTLTAIAKNSRGKETVLSKQITIYPVIDLSFDLPDTTHT
DKSVTLAFPLDKLYGHDIVWSATKDGEAAQPTDIIDGELGNEGGTFVFRNKGEHTLSATI
TDDTGRVFTHSESSKVYPVAGIAFSLPAASHTDTTLNVVTTLKEADGLNVDWSLTKNGEA
VALAEAVEGTLTNEGGTLRIKDKGVYMLTGRMTDEIGRAFEASQSITIYPVGSIGFYVPE
ITHTDKAVKVENSFENLGDATIQWSLTRDGEAVELDDAIEGDLTNAGGSIRFINKGEYVL
KASFTDPAGRSYSYTAAVKVYPVPSISYTLPETAHTDTVVNVVPESSELGSLKVEWLLEN
GFGFQDFETYVSGTLDNTGGAIRFKHAGTYELIARITDETGRVFLFENGGTIEVLPVLNI
SFELPDATHTDRIIDLRTRGNNNVLPVEWTLTKDGEQVEPSDFMEGSLNAYGGKIEFTQV
GDYVLTASMTDALGRVFSYSASTSVYPIPSISLSAPQVWYAGESGTISVSGTDLENLTAD
WTVIKDDGGAEPYSNYASGTLTKAGGTITFPAKGQYMLTLTMTDPTGRTFIRSQRFTVYP
IPSMTLSIPQTWHTGEAGTVGVSGTDLENLTASWTVKQGTGDVKPYYAYASGDLAKDGGT
ITFPSKGQYQLILTMTDVNGRSFTKSRSFTVYPIPSVSLSSTQPWYVWEAGTVSVSGMDL
ENLIASWTISQGSGDEKPYSAYVNGTLSKAGGTITFPAKGQYELTLTLTDATGRTFVRSQ
SFTVYPIPQMTLGLTALSYSGDPIAVTASGSELNGTSIDWLISVDGGQAKPYTQYATGSV
GTGGGSLTISTDKTIAVKLIAEATDVNGRKFTFTSNTATVKPIASFPFTIPSSVHIGGNI
NVSLPTASGLEGRTLTWSLTKDGSPASYSGSLSNSGGVIAINAPGSYVLTASTTDSAGRV
FTYSQSITITNTAPNKPTGSATVTRTAQNGKLLVNISASATDPDGDAVTLEYSGNTTDSY
YPVGTHTVYVRAKDAWELYSDWKAITFTVNNSAPTTPVITRTPDGNSIAPGVPITITASS
TDADGDAIIYVWEGRPAQTSTAYPLGKNVVRVKAVDSTGAESPWAAIVFFIADPNRGGGM
TLTGPESVILEQGIAGATITNYTFTVPPVSGHSGQDFGRVRGYNVLTGQWDQLNYATTTN
GITFSRSLSPGIYSQLEFYYYTNHDCMYNKSNITYSVSFYFE
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaggaaagcgcattgccattattactcttgcgctgcttctcctgatatgc
ggcggcatttatacggcataccgcctgcatccggaaagctttatcgggcaggatgaaatc
atcacacgcggtgagtacgcagccattatggcacaggacatgcagctggacacctcaaac
acggaaaaggagccgcccagcttccccgatatcgatgatcattggtcggagaagtatatt
gagtcgctcatcgacgcaggaatcattgatcctgccgattatcccgacggcttccatcct
gacgatcccatcacccgcgcagaaattgtaaagatgcttgtgagagcggaggataaggat
gaggaagctaaaaatacacaggggcacagcggttatgatgaccagtcggacatcaaggag
gatgacaagggatatgtcatcatcggccgtgaggacggaatcatcggggatactgatgac
aacaaaattcgtcctaatgatcctgttaccaagggtgacgccgaggatatgattgacaag
atcactcccaagccgacagagccaaccgctcctgcgcagactccggataccacagctccg
agtccgactccaggagccaccgagcagcccacaccgactccggcaagtcctgatccggac
aagccgactccctctccaacgcctgcacccacaccgggtaacacaggcggaggctctgga
ggctcaggcggtggcggcgggacatattatcctcccgcacaggtgcgctttgagcttccc
gaaatggctcatactgacagcgagataaagataatgccggtatggaagtacatgaaaagt
tatacctggacgctgaccaaaactgccgtagatggctcccaacagcctgtagagctggcg
gacgccgttaccggtttccttggtttggagggcggcgctattcaattcaaggaggatggt
cagtacactctgaccgctatagccaaaaactccagaggaaaagaaacggtgctatccaaa
cagattacaatatatcctgtcatcgacctgagctttgacttgccggataccactcatacc
gacaaatcggtaacgcttgccttccccttggacaagctctacggtcacgatatcgtgtgg
tcggcgacaaaggacggcgaagcagcccagccgacagacattattgacggcgagcttgga
aacgagggcggtacctttgtgttcaggaacaagggtgaacatacgctgtcagcgactatc
accgacgataccggccgagtgttcacccacagcgaaagctccaaggtctaccctgtggcg
ggaatcgctttttcgcttcccgctgcgtcccataccgacaccacgctaaatgtagtaacg
actctgaaggaggctgacggtctgaatgtagactggagcctcaccaagaacggtgaggcc
gtcgctcttgccgaagcggtcgagggtacgctcaccaacgagggcgggacgctacgcatc
aaggacaagggcgtatatatgctcaccggtagaatgaccgatgaaatcggcagggccttt
gaagcctctcagagcatcaccatctatcctgtaggttccattggcttttatgtgccggag
attacccataccgacaaggctgtaaaggtagaaaacagctttgaaaacctgggcgacgcc
acgatccagtggtcattgaccagggatggagaagctgttgagcttgacgatgcgattgag
ggcgatctgaccaacgcaggcgggagcatccgcttcataaataaaggcgagtatgttctt
aaagcttccttcactgaccctgctggcagaagctacagctatacagcagcggttaaggtc
tatcctgttccgagtatttcatatactttgccggaaactgcccataccgacaccgtcgtc
aacgtagttccggaaagctctgagcttggcagcctgaaggtcgagtggctgttggagaac
ggcttcggattccaagattttgagacttatgtcagcggaacgctggataacacaggcgga
gctatccgtttcaagcacgccggaacctatgagctgattgcccgtatcaccgatgaaaca
gggcgggtgttcctgttcgaaaacggcggcaccatcgaagtcctgcccgtgcttaatatt
tccttcgagcttcccgatgcgactcacactgaccgcatcatcgacctgagaacacgcggc
aacaacaatgtgctgcctgttgagtggacgcttaccaaggacggcgagcaggttgagcct
tccgatttcatggagggaagcctgaatgcctacggcggcaaaatagaatttacgcaggtc
ggagactatgttctcaccgcctccatgacggatgctctgggcagggtgttctcctacagc
gcgtccacctcggtctatccgattccttcaatttcactcagcgccccgcaggtctggtac
gcaggcgaatccggaacaataagcgtcagcggcacggatctggagaacctcaccgcagac
tggacggtcataaaggatgacggcggcgccgagccgtattcaaattacgcatccggcacg
ctcacaaaagcgggcggcacaattaccttccccgcaaagggacagtacatgctgaccctt
acgatgactgaccccaccggccgcacctttatcagaagccagagatttaccgtctatccg
attccgtcgatgactttgagcataccgcagacctggcacaccggagaagccggaacagtc
ggagtcagcggcacggatttggaaaacctcactgcaagctggacagtcaagcaagggact
ggtgatgtgaagccatattatgcttatgcttccggcgacttggccaaggatggcggcacg
attaccttcccgtcaaaaggacagtatcagctgatccttacaatgacggacgttaatggc
cgttccttcaccaaaagccgcagcttcactgtctatcccattccgtctgtttctctcagc
agcacacagccctggtacgtttgggaagctggaacggtaagtgtcagcggcatggatttg
gagaacctcatcgcaagctggacgatcagtcagggcagcggcgatgaaaagccgtattca
gcttatgtcaacggaactctgtctaaagcaggcggtacaatcaccttcccggcgaaaggt
cagtatgagctgacgctcactctgacggacgccaccggccgaacatttgtcagaagccag
agctttaccgtttatcccataccgcagatgaccctcggactcacggcactcagctacagc
ggcgaccccattgccgtaaccgcctccggctcagagcttaacggaacgagcatcgattgg
cttatctctgtggatggcggtcaagccaagccctatacccaatatgccacaggctctgtc
ggcacaggagggggcagtcttaccatcagcacggataaaaccattgccgtgaagctgatt
gcggaagcaacggacgtaaacggcagaaaattcacatttacatccaataccgcaacggtc
aagccaattgccagcttcccgttcaccatcccgtcctccgtgcatatcggcggcaatata
aatgtgtccctgccgacagcatccggactagagggcagaaccctcacatggtcgctgacc
aaggacggaagcccggcttcctattccggaagtctgtcaaacagcggcggcgtcattgca
attaatgcacctggcagttatgttctgaccgcaagcactaccgacagcgcaggcagagta
ttcacctattcgcagagcatcaccatcaccaataccgcaccgaacaaacctactggcagt
gcaacggttaccagaacggcgcaaaacggcaagctgctggtgaacatctcagcttcggct
accgatcctgacggcgacgctgtaacgcttgagtattcaggaaatacaacggacagctac
tatcctgtgggcactcacaccgtttatgtcagggcaaaggacgcatgggaactgtattcc
gactggaaagctattaccttcactgttaacaactccgcgcccacgacgccggtgattacc
cgtacccctgacggcaacagcatcgctcccggcgtaccaatcaccatcacagcctccagc
accgacgctgacggcgacgccatcatctatgtatgggaaggacgtccggcgcagaccagt
acagcatatccgcttggcaagaatgttgtacgagtgaaggctgtggactccactggtgcc
gaatcaccttgggctgcaatcgtgttctttattgccgaccccaacagaggcggtggtatg
acgctgaccggccctgaatctgtcattctggaacagggtattgcgggtgcgaccattacc
aactacacttttacggtgccgcctgtcagcggacacagcggccaggactttgggcgtgtg
cgagggtataacgtgctgacagggcagtgggatcagctgaactacgcgacgaccaccaac
ggcatcaccttcagccgcagcctgtcgccaggcatatacagccaactggaattctactac
tacaccaaccacgactgcatgtacaacaagtcaaatatcacctactcagtaagcttctat
tttgagtaa
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integrated database retrieval system