Desulfoscipio gibsoniae: Desgi_3598
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Entry
Desgi_3598 CDS
T02657
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desgi_3598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_3598
Enzymes [BR:
dgi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Desgi_3598
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desgi_3598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGL02921
UniProt:
R4KTI2
LinkDB
All DBs
Position
complement(3606782..3607399)
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AA seq
205 aa
AA seq
DB search
MSAVKTKFFDYGRKETEYLAVADPILGEAMARLGRVEREVIPDLFAALVYAIIGQLVSVH
SAKTVWERIQESIGEITPENLSGFTPDDVRQCGMTMKKAVCICDLSKEIVQGNLCLNNLR
ELPDSEIIRHLTAIRGIGRWTAEMLLINCMERPDIVSWEDIAIRRGMEKLYGIPKLTKKQ
FESYKKRYSPYGSVASIYLWKLSFL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgttaaaaccaagttttttgattacggcaggaaagaaacggaatacctcgcc
gtggcagatccgatacttggcgaagcgatggcacggcttggacgagtggaacgtgaggtg
attcccgacctgtttgcagcgctggtatatgccatcattggacaactggtctccgtccac
tccgcaaaaactgtatgggaacgaatacaggaaagcattggtgaaatcaccccggaaaat
ctgtccggttttaccccagacgacgtccggcaatgtggcatgaccatgaaaaaagctgtc
tgtatctgcgatctgtcaaaagagatcgtgcagggaaacctttgtctgaataatctacgg
gagcttcccgacagtgagatcatccgccacttgacagccatccgcggaatcgggcgctgg
actgcagagatgctactcatcaactgtatggagcgtcccgatatagtcagttgggaagac
attgcaattcgtcgtggaatggaaaagctctacggcattccaaagctgacaaagaagcaa
ttcgaatcatataaaaagcgatattcgccctatggctcggtagcttccatttatttatgg
aagctttcctttttatag
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