Desulfoscipio gibsoniae: Desgi_3628
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Entry
Desgi_3628 CDS
T02657
Name
(GenBank) putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K07576
metallo-beta-lactamase family protein
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
Desgi_3628
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GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_6
Lactamase_B_2
Lactamase_B_3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGL02951
UniProt:
R4KTL2
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Position
complement(3634956..3636518)
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AA seq
520 aa
AA seq
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MRITFYGAAQTVTGSCHLVEAANKKIMIDCGMFQGHRLSRERNYLPFSVIPQTVDYLLIT
HAHIDHSGLVPKLYKHGFRGRALATGATVDLLEVLLPDSGHIQEMEVARLNRKAMRAGKK
LLDPIYTAEDAFDCVKKIEQAKYNQIISLDENIKVRFVDAGHILGSSILELWVREGTKQT
KLVFSGDLGSVGKPFVKDPAVIEEADYLVMECTYGDRLHRDKENRLEKLRTVIKETYDKG
GNLIIPAFAVERTQDLLYDINLLLVKGQLPPIQVYIDSPMAVAATEVFKRHYEHFDQETS
RLISEGENPLTMSVLQLSRTVEESRALNEIQGGAIILSASGMCDAGRIKHHLKHNLWRPE
STVLFVGYQAPGTKGQRLLSGVPSIRIHGEEVAVRADIRSIDGYSSHADQQELLDWMNAY
KQKPGRVLLVHGDPEALAVMEKLAPEKTGIDAYAPAWQETIELTPGVVFSAEELQRAYHA
VAARMDGFMQSTPSRSDLEQVMEQFKQLEFLLDKVSKTGQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcggataactttttacggtgcggcgcagactgttaccggttcgtgccatcttgtggag
gcagccaacaaaaaaataatgattgattgcggtatgtttcaaggtcaccggctatctcgt
gagcgtaactacctacctttttccgtgataccccaaacagttgattatttattgattacc
cacgctcatattgatcacagtggcctggtacccaaattgtacaaacacgggttcagaggg
cgggcactggccaccggggctaccgtggacttgttggaagtattgctgcccgacagtggg
catatacaggaaatggaggtggcccgcttaaaccgcaaggctatgcgggcaggcaaaaaa
ttactcgatcccatttatacagctgaggatgcctttgattgtgtaaaaaaaattgagcaa
gctaaatataatcaaatcattagcttggatgaaaatattaaagttcgttttgtggatgcc
ggtcatatactgggttcatcaatactggagctgtgggtgcgtgaggggaccaagcaaacc
aagctggtgtttagtggggatttggggtctgtaggcaagccctttgttaaagaccctgca
gtcatagaagaagcggattatctggtgatggaatgtacttatggtgacaggctccaccgc
gataaagaaaaccggctggaaaagctgcgtacggtaataaaggaaacttatgataaaggt
ggcaacttgattatccctgcttttgccgtggaacgcacccaggatttactttatgacatt
aacttattgctggttaagggccagctgccccctatacaagtatatatagacagtcccatg
gcggtggctgccactgaagtttttaaaaggcattacgaacattttgatcaagaaaccagc
cggctgatatcagagggggaaaacccgctaaccatgtcggttttacaattatcccgcaca
gtagaagaatcaagggcgctgaatgaaatacagggcggtgccattatactgtcggccagt
ggtatgtgtgatgccgggcgcattaagcaccatttaaaacataacctgtggcgacccgag
agcaccgtgctgtttgtgggttaccaggctcccggtaccaaggggcagcggctgctcagc
ggggtgccttccattcgtatacacggtgaagaagtagctgtgcgggcggatatcagatcc
atcgatggttactcttcccatgccgaccagcaggaattactcgactggatgaatgcttat
aaacaaaagcccggccgggttttgttggtgcacggtgatcccgaagcgctggcagtcatg
gaaaagctggcaccggaaaaaaccgggattgatgcttacgccccagcctggcaggaaacc
atagaactaacacctggagttgttttcagcgctgaggaactacaaagagcctatcatgcc
gtggcggcaagaatggatggttttatgcagtccacacccagccggagcgatttagaacag
gtaatggagcagtttaaacaattggagttcctgcttgataaagtttccaaaacaggccag
taa
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