Desulfoscipio gibsoniae: Desgi_4052
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Entry
Desgi_4052 CDS
T02657
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
Organism
dgi
Desulfoscipio gibsoniae
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AGL03321
UniProt:
R4KUM5
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Position
4121895..4125680
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AA seq
1261 aa
AA seq
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MARGRKYGRTWWGNAWVEALERIDQNTNRLPRGRSYANAGRVSEIKIDATGRVYARVKGT
RPTPYKIEIRLNEFSQRAKETAGAIIAEDPALAAELSMGRLPENILQLLEKHNISLLPES
WNDIIAHCSCPDWANPCKHLAAVYYIMANEIDKDPLILFKLHNIKPRELMREAGFIGKQG
EGYLAASEELTEPFPCFPAAGTPAFAPYQETIIPLPGSEAAAHKTEPAEEIPVDLSALAD
SKESESIFTLLGDTPLFYSGGDFKALLLKAYKNISRSVSNLMLLENNFSFKDMAFTLIYP
TTAEINKFLLDNHSKQRFQHKLYFFISLLTASGERKSDPNIMFSPAGENIMLDIPVAAGE
KMVLKRKRGVLLPAEAVWDLFLALPFKLSAHRTSPWTDFLCATTALAQALARSSSFIPVL
RSLDTDKAKTSGQGNFYVVYRPMDRSGKLPQMVEYLASIMPPGMIFCRKEKGILEGTAAV
EELLTLILTHLVDRFSDINPSAGDKTVRAFFCGEPYLVGKFEEEQTAKAISDWLGWLNLR
PNEIAPVLKIGLPRSGSEKFSLKVYVENKKDPLAPVLPLKELFTDKKELFSRPTAFARRE
IAHQLTIAGAHIPILKKLLSHKGNKQANLSPPNLAEFVTGGQQICSLLGIRVMVPKELKQ
MAVPRLALAARTAKSSEKNVSYFNLDEMLEFTWQVSLGDVTMTGEEFRRLAESASGVVKF
KEQYLLLKPQEVESILAKLRNPVPRLSSMEVLRAAATGEAAGAVFNPDRMLQQLVNDLSM
PEEVVLPTGLQADLRPYQHRGFKWLYNLAVRGLGSCLADDMGLGKTIQVIAVLLKLSEQG
WLTKPALVVCPTTLIGNWVKECSKFAPSLKVAVYHGSDRRLNTKGVDLMITSYGILRRDR
VKFKRNIWSLVIIDEAQNIKNPESDQTRAVKALSAGARIAMSGTPVENRLMEMWSIFDFI
NSGYLGERKNFANSFSIPIEKYRDKEIINRFKKATAPFLLRRLKSDRSIIKDLPPKVIKE
ENCYLSKEQASLYQQVLEQVMSEIEQSEGITRKGMVFKLITSLKQICNHPVQYSKKGKVT
RQHSGKAAKALDLLEQIAAAGEKTLVFTQYKEMGELLVELIRDELQIDALFFHGGVSRQK
RDAMVEEFQKDKDAAPVMVVSLKAGGTGLNLTAATHVIHYDLWWNPAVEDQATDRTYRIG
QTRTVLIHRLISLGTFEEKINTMMASKRELAELAVATGESSISELSNAELKELFRLVQHK
V
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggggcagaaaatatggcaggacctggtggggtaacgcctgggtcgaagcactg
gaaagaatagaccaaaacaccaatcggctcccccgggggagaagttacgccaacgcgggt
agagtgagtgaaattaaaatagatgcaacaggaagagtatatgcaagggtaaagggcacc
cgccctaccccatataaaatagaaatcagactcaatgaattttcgcagcgggcaaaggaa
accgccggggccataatagctgaagacccggccctggctgctgaactatctatgggtcgg
cttcccgaaaacatcctgcaacttttggagaagcataacatctctcttttgcccgaatct
tggaatgatataatcgcccattgttcctgcccggactgggccaacccgtgtaaacacctg
gcagctgtttattatatcatggccaacgaaatcgacaaggatcctttaatcctgtttaaa
ttacataatatcaagccccgggagttaatgcgggaggcaggttttatcgggaagcaaggg
gaaggttaccttgctgcatccgaagaattaacagaacccttcccttgcttcccggctgcc
ggtacgcccgcttttgcaccttatcaggaaaccattattcccttgccaggtagcgaggca
gcagcacataaaacagagccggcggaagaaataccggtcgacttaagcgccctggccgat
agcaaagagagcgagtccatatttacacttttgggcgatacgccccttttttactccggt
ggagactttaaagctctgttgttgaaagcttataagaatatatcccgttccgtgtccaac
cttatgctgttggaaaacaacttttccttcaaggacatggcctttaccctcatttatcct
accaccgcggaaattaataaatttctgcttgataaccatagtaagcagcggttccagcat
aagctgtactttttcatatccttgttaactgcttccggggagagaaaaagcgaccccaac
attatgttttccccggccggggaaaacataatgttggatatacccgtggcagcgggagag
aaaatggtcctgaaaagaaaaaggggtgtactgctgccggcagaggctgtttgggatctt
ttccttgccctgccctttaaactgtccgcccaccgcacatctccctggacggatttctta
tgcgcaaccacggcactagcccaggcactggccaggtcgtcttcttttatcccggtttta
agaagcctggatacagataaagcaaagaccagcgggcaggggaatttttatgttgtttac
cggccaatggacaggtccggaaaattgccgcagatggtggagtatctcgcttcgataatg
ccacccggtatgatcttttgccggaaggaaaaggggattttagaaggtactgcggcagtg
gaagaattgctgaccctgatcctaacccatctggtcgaccgtttttccgatataaatccc
agtgccggtgataaaacggtcagggcatttttctgtggggaaccttacctggtgggaaaa
ttcgaagaagaacaaacagcaaaggccatctcagactggcttggctggctcaacctgcgc
cccaacgaaattgctccggtgcttaaaataggactgccccgctccggcagtgaaaaattc
tctcttaaagtgtatgttgaaaacaaaaaagacccgctggcgccggtgctgcctttaaaa
gaattgtttacagacaaaaaagaacttttttcccggccgactgcatttgcccgccgggaa
atagcccaccagttaaccattgccggtgcacatattcccatcctgaaaaagctgttaagc
cataaagggaataaacaggccaacctttccccaccaaacctggccgaatttgtcaccggg
ggacaacagatctgttccctgctgggcatcagggtgatggtccccaaagaattgaagcaa
atggccgtaccccggttggcgctggcggctaggacagcgaagagcagtgaaaaaaacgtc
tcctatttcaacctggacgagatgctggaatttacctggcaagtgtccctgggcgatgtc
accatgaccggggaagaatttcgccggttggctgagtctgcgtcgggcgtagtcaaattc
aaagagcagtacctgcttcttaaaccacaagaagttgagagtattttagccaaactgcgc
aacccggtaccccggctttcctcaatggaagtattgcgggccgcagccaccggtgaagca
gcgggggctgtttttaaccccgaccgaatgttacagcaactggtgaacgacttgagtatg
ccggaggaggttgttttgccgaccggcttacaggccgacctgcgcccctaccagcacagg
ggctttaagtggctgtataaccttgccgtcaggggcctggggtcctgcctggccgacgac
atgggtttgggcaagacgattcaggtaatcgccgtactgttgaagctaagcgaacaaggt
tggcttaccaagcccgccctggtagtgtgcccaactaccctgatcggtaactgggttaaa
gaatgcagcaaatttgccccctcactgaaggtggccgtctaccacggcagcgaccgcaga
ttaaacaccaaaggcgtggacctgatgatcacttcttatggcatattacgccgggatcgg
gttaaatttaaaagaaatatttggagcctggtcatcattgatgaggcccagaacattaag
aatcctgaaagtgatcagaccagggcggtgaaagccctatcggccggggcccgtatcgcc
atgagcggaaccccggtggaaaacaggctaatggagatgtggagtatttttgacttcatc
aacagcggttatctgggcgaacgaaagaattttgccaatagcttttccatacctattgaa
aaatacagggacaaagagatcattaaccgttttaaaaaagccaccgctcctttcctgctg
cgcagacttaaaagcgaccggtcgattatcaaggaccttccgcctaaagtaattaaggaa
gaaaactgttatttaagtaaagagcaagcatctctataccaacaggtgctcgaacaggtg
atgagtgagatagagcaaagtgaaggtattacccgtaaaggcatggtctttaaactgata
acctcactcaaacaaatttgcaaccacccggtgcagtacagcaaaaaagggaaggttacc
aggcaacattcaggtaaagccgcaaaggcactggacctgctggaacaaattgcggctgcc
ggggaaaaaacgctggttttcacccagtacaaggaaatgggcgaactgctggtagaattg
atccgggatgaattacagatagatgccttattcttccacggcggagtgtcccggcaaaag
cgggacgccatggttgaagaattccaaaaagataaggatgccgcgcccgttatggtggtt
tccctcaaggccgggggaacagggctgaatttaacggcagctacccacgtgattcattac
gacctctggtggaacccagccgtggaagaccaggccaccgacaggacctacagaataggg
cagaccaggacagtgctgatccaccgcctgatcagcctgggcaccttcgaagaaaaaatc
aatactatgatggcgtccaaaagagaactggctgaactggcggttgccacgggcgaaagc
agcatcagcgaactttccaacgcagaactgaaggaactgttcaggctggtgcaacacaaa
gtataa
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