Desulfoscipio gibsoniae: Desgi_4062
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Entry
Desgi_4062 CDS
T02657
Name
(GenBank) transcriptional regulator with HTH domain and aminotransferase domain
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgi03000
]
Desgi_4062
Transcription factors [BR:
dgi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Desgi_4062
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
TrmB
HTH_11
HTH_36
HTH_Crp_2
Rrf2
HTH_23
HTH_22
HTH_IclR
HTH_41
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AGL03330
UniProt:
R4KRX2
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Position
complement(4132970..4134442)
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AA seq
490 aa
AA seq
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MIQYKLVLFKIQFGANIRVPVGGYMLGIELRRNSGVSLARQIYRTLRNQMTEGRLKQGDV
LPSTRELAKHLTVSRNTVYEAYEMLSAEGFIESRPGSQTRVANGLLLAKADPPAEHFEEA
VQATISYLVDFQTGQPDLRYFPQSSWLQYLRKAAESLPQEQWGYSGAEGIPALRREIAGW
VYRSKGMTVHPQNIFITSGATQALHLLAELLSVYGKDILMEDPCHMGMLRVLQGKGFNIL
PVPVDKQGLQTDFLKNSGACAIYVTPSHQFPLGGILPATRRAALIRFARENDLFIIEDDY
DSEFRYCGPPVAPLYTMDSQRVIYVGTFSKILYPALRIGFVVLPRRFHSQWCYLRRHVDV
QNPPFEQAALAKYLRTRKLDRHVRKMRKLYGQRREILLQAIEEKFSRTWHPWGDASGLHL
ALEFPGLHFDQAFLLRCKESGIRIALVDYHSINKNLHSDKLLLGYGHLEAKEIRQGVSLL
HKCLHAASRR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatacaatataaactggtactatttaagatccagtttggcgccaatattagggtgcca
gtgggagggtatatgttaggaattgaattgcgccggaacagtggtgtttctctcgcacgc
cagatttaccggactttgcggaaccaaatgaccgagggccgactaaagcagggggatgtg
ctgccttccacaagggagttggccaagcatctaaccgtgtcgcgcaatacggtttatgaa
gcctatgaaatgctgtcagctgaaggtttcatcgaaagccgtccaggttcgcagacccgt
gtggcgaacggactgctgcttgcgaaggcggatccgcccgcagagcactttgaagaagca
gttcaagcaacaatttcatatctcgtggatttccaaaccggccagccagatctgcgttac
tttccccaaagctcctggctgcagtatctgcgtaaggccgcggaaagcctgccgcaagag
caatggggatattccggggcagaagggattccggcgcttcgccgggaaattgccggctgg
gtctatcgcagtaagggaatgactgttcacccgcaaaatatatttattacttccggggct
acacaggcgctgcatttattggcagagctgctgtcagtgtatgggaaagatattttgatg
gaggatccttgtcatatgggcatgttaagggtgctgcagggaaagggatttaatatactg
cctgttcccgtagataaacagggccttcagacagatttcttaaagaacagcggtgcgtgc
gcgatttatgtaaccccgtcacatcagttccctcttggagggatactcccggcaacccgt
cgtgccgcactgatacggtttgcgcgagaaaatgacctgttcataatagaagacgattat
gacagtgaattccgctattgtggacccccggtggcccctctttatacgatggactcgcaa
agggttatttatgtaggaacattcagcaaaattctttatcctgcactgcggatcggcttt
gttgtgctgccccgccggtttcacagccagtggtgttacttgcgcaggcatgttgatgtg
caaaaccctccctttgagcaggcagcacttgctaaatacttacgcacccgaaaactggac
cggcatgtgcgcaagatgcgcaagctgtatggacaaaggcgggaaatacttcttcaagcc
atagaagagaagtttagcagaacatggcatccctggggagatgcttcaggtttgcacctc
gccttggagttccccggcctgcattttgatcaagccttcctattgcgctgtaaagagtca
ggaattcgtattgccctggtagattatcacagcatcaacaagaaccttcattctgataag
ctgctgctgggatatggtcatctggaagcgaaggaaattcgccaaggggtatcgttatta
cacaagtgcctgcatgcagcatcccgccgttaa
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