Desulfoscipio gibsoniae: Desgi_4112
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Entry
Desgi_4112 CDS
T02657
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00061
Fatty acid biosynthesis
dgi00071
Fatty acid degradation
dgi01100
Metabolic pathways
dgi01212
Fatty acid metabolism
dgi02024
Quorum sensing
dgi04146
Peroxisome
Module
dgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Desgi_4112
00071 Fatty acid degradation
Desgi_4112
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Desgi_4112
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desgi_4112
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dgi01004
]
Desgi_4112
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dgi04147
]
Desgi_4112
Enzymes [BR:
dgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Desgi_4112
Lipid biosynthesis proteins [BR:
dgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Desgi_4112
Exosome [BR:
dgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Desgi_4112
Exosomal proteins of breast cancer cells
Desgi_4112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGL03367
UniProt:
R4KP80
LinkDB
All DBs
Position
complement(4182741..4184435)
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AA seq
564 aa
AA seq
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MFKDDFFWCQHYPQGVPHRIEIPNVSLYYFLEQAAQKYPAHTATIFMGHKLTFSRLKEQV
DRLATALNDLGVKKGDRVAVMLPNCPQTVIAYYAIVSIGGVVVMTNPLYMERELLHQLRD
AEAETLIYLDAMGHKVLNMVHRTRVKNLIVTGVQDYLPFPLNYLYPIQAKKQGQVLDAPG
DRGVLHFKKFLQKYSPRSPRVQLDPENDLALLQYTGGTTGLSKGVMLTHKNLVANVKQVH
AWLTDCRDAGERMLGALPFFHVFGMTVVMNFAIYCCSTMILLPRFQIDTVLKQINKYHPT
LFPGAPTMYVAVVSHPELNKYDISSIKACISGAAPLPVEVQEKFERLTGGKLVEGYGLTE
SSPVTHCNPINGDQVSGSIGQPLPNTDVKIMDNCTGTKEMPLGEVGELCIRGPQVMKGYW
NMPEETARTIRDGWLYTGDIARMDERGFTYVVDRKKDIVIAGGYNIYPREVEEVLYGHAK
VKEVVVAGVPDTYRGETLKAYIVLKEGEKATEQEIINYCTEQLVKYKVPRKVEFRYELPK
TMVGKILRRALVEEERSKLEENNK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggatgatttcttttggtgccaacactatccccaaggcgtgccccaccggata
gaaataccaaatgtatctctttactatttcttggaacaggctgcccaaaagtacccggcc
cacacagccactattttcatgggccacaagcttactttcagccggcttaaagagcaggtg
gaccggttggccacagcactgaatgacctgggtgtcaaaaaaggggaccgggtggccgtg
atgctccccaattgcccccagacagtgattgcttactatgccatcgttagcataggtggc
gtggttgttatgaccaatcccctttatatggaaagggaattattgcaccagctgagggac
gcggaagcggaaacattaatttacctggatgccatgggccataaggtactaaatatggtg
caccggaccagggtaaaaaatttaattgtcaccggggtgcaggattaccttccctttccg
ctcaactatttatatcccatccaggctaaaaagcagggccaggtacttgatgcgcccggt
gaccgcggtgttttgcattttaagaaatttttacaaaagtattcaccccggtcgcctcgg
gttcagttggatccggaaaatgacctggctttgctgcagtatacgggaggcaccacaggt
ttgtccaaaggggttatgttaactcataagaacctggtggccaatgtgaagcaggttcac
gcatggttaaccgactgccgtgatgcgggagagaggatgctgggagctttgccgttcttt
cacgtgtttggcatgacagtagtgatgaactttgccatatattgctgttccactatgatt
ttgctgccgcgtttccaaatagacactgtattaaaacaaattaataaataccacccaact
ttgtttccaggtgctcccaccatgtacgtggcggttgtatcccatcccgagctgaataaa
tacgatatttcctccattaaggcatgtatcagcggtgcggcgcccctgccggtggaagtg
caggaaaagtttgaaaggctgaccggcggtaagctggtggaaggctacgggttgacggaa
tcctctccggtaacccactgcaatcctataaatggggatcaggtttcggggtccatcggg
cagcccctgcccaataccgatgttaagattatggataattgcacgggcacaaaggaaatg
cccctgggcgaggttggggaactttgtattcgaggtcctcaggtaatgaaaggttactgg
aatatgcccgaggaaacggccaggaccattcgggatggctggctgtataccggggatatt
gccaggatggatgaacgggggtttacatacgtggtggaccggaaaaaggatatagttatt
gccggcggctacaatatttatccccgtgaagtggaagaagtgctgtacgggcatgccaag
gttaaggaagtggtggtggccggcgtgcccgacacctaccgtggcgagacgctcaaagca
tatatcgtccttaaagagggtgaaaaggccactgaacaggaaattattaattactgcact
gaacaactggttaaatataaagtccccaggaaagtagagtttcgctacgagctgcctaag
acgatggtgggtaaaatattgcgccgggccctggtggaagaagaaaggagtaaactggag
gaaaacaataaatag
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