KEGG   Desulfoscipio gibsoniae: Desgi_4166
Entry
Desgi_4166        CDS       T02657                                 
Name
(GenBank) CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
  KO
K19117  CRISPR-associated protein Csd1
Organism
dgi  Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgi02048]
    Desgi_4166
Prokaryotic defense system [BR:dgi02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    Desgi_4166
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AGL03421
UniProt: R4KUX4
LinkDB
Position
complement(4244925..4246733)
AA seq 602 aa
MIINALYRHYETLLNDPDSGVSRPGFNKVKVGYCLVLSRQGRLLDILDLRVERDKKLVSR
DMTVPEQGKRAVNIFANFLCDNCTYVLGLGQKGKTVKLDRIKKCFQEFVQKHDQILGNVA
DEGATALLEFLHSWDITGALEHPVISRHIDELSEGLNLVFKLEGATGYLHENKAMVDAWE
MYRSGQASNINMQCLVTGKDTGIARLHPNIKGVTGAQTSGASLVSFNLDAFTSYGKKQSF
NAPVGEEATFGYTTALNYLLSNAKHRVRIGDTTTVFWAECSTGGLEEDLLGALFFPVGEE
SDAKKEKENKNSFQVVRDPQTVKLMHDIFQRVRAGKPVGQGLVGVNWDTNFYILGLAPNA
SRLAVRFWHMDPYVKFIEKIGQHYADMAIVKRYDNDPDFISISMLLKETAPLRDTKRIAP
LLGGLLMRSILTGMPYSTALYNAIISRIRADQEVNYVRAAAIKAFLARNRRYYNKGNEVD
LTVALNESNNNTGYLLGRLFALLEKAQEDANPGINSTIRDRYFGSASASPSSVFPILLRL
AQHHISKAEYGRYTDKRIEEVISAIDCFPAYLNIEDQGQFVLGYYQQRQALFIKSEKKES
VN
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgattattaacgcgctctatagacactacgaaacgctattaaatgacccggattccggg
gttagccgacctggttttaataaagtgaaagtgggttactgcctggtgctttccaggcag
ggccggttgctggatattcttgatctgagggtggaacgggataaaaagctggtatctaga
gatatgacagtgccggaacaaggtaaaagagcagttaatatttttgccaactttttatgt
gacaactgtacttatgttttgggcctggggcagaaaggtaaaacagtaaaactagataga
attaaaaaatgctttcaagaatttgtgcaaaaacatgatcaaatactgggtaatgtagct
gatgaaggtgcgacagcacttttggagtttttgcacagctgggatattaccggtgcactg
gagcatcctgtgatatccaggcatattgacgaactgtccgaaggcctgaatctggtgttt
aaactggagggggcgactggctatttacatgaaaataaggcgatggtggatgcctgggaa
atgtaccggtcgggtcaagcttctaacataaatatgcaatgcctggttaccggaaaggac
acgggtatagcccgtttacaccctaatataaaaggtgtgaccggggctcagaccagcggg
gcttcgctggtttccttcaaccttgatgcttttacttcttatggcaaaaagcagagcttt
aacgcgccggtaggcgaggaagcgacatttggttatactactgcgttgaattacctgctg
agcaatgctaagcaccgggttagaatcggtgacaccacaactgttttttgggcggaatgt
tccacgggcggcctggaggaagacctgctgggggcgctgtttttcccggttggcgaggaa
agcgatgctaaaaaggaaaaagaaaataaaaacagctttcaggtagttagggatcctcaa
acggtaaaacttatgcatgatatatttcagcgggtcagggctggtaaacccgttggccag
ggtctggtaggggttaattgggacaccaacttttacatactgggtttagcccccaatgcc
agtcgtctggcggtgcgtttttggcacatggacccatatgtaaaatttatagaaaaaata
ggtcagcattatgccgatatggccatcgtaaaaagatatgacaatgatccggactttatt
tcaattagcatgctcctaaaagaaactgcaccgctaagggataccaaaagaatcgccccg
cttttgggcggcctgctaatgcgctccatacttaccggcatgccttattcaacggcctta
tataacgcaattatttcccggataagggcggatcaggaagtaaattatgtgcgggcggcc
gccataaaagcatttctggccaggaaccgccgctactataacaaaggaaacgaggtggat
ttaactgtggctttaaatgagtcaaacaataacacggggtatctgttgggacgtctgttt
gccttgctggaaaaagcgcaggaggatgccaatcctggtataaattcgactattagagac
aggtattttggatcggcttccgcatctccgagctcagttttccctattttattaagactt
gctcaacaccacatctccaaagccgaatatggccggtataccgacaagcggattgaggaa
gtaatatccgccattgattgtttcccggcctacctaaacattgaggatcaagggcaattt
gtccttggctattaccagcagcgccaggctctttttatcaaatccgagaaaaaggagagt
gttaattaa

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