Desulfoscipio gibsoniae: Desgi_4174
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Entry
Desgi_4174 CDS
T02657
Name
(GenBank) PAS domain S-box
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgi03000
]
Desgi_4174
Transcription factors [BR:
dgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desgi_4174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
PAS_4
Mg_chelatase
AAA_5
PAS
HTH_30
PAS_8
PAS_9
AAA_PrkA
HTH_50
AAA
HTH_23
Diguanyl_cycl_sensor
HTH_28
AAA_16
AAA_2
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AGL03429
UniProt:
R4KL94
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All DBs
Position
4256848..4258953
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AA seq
701 aa
AA seq
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MVVSSTRLNKKKKLEKYWEGFITSDKFDLSQLNSTIASSWQRCKEAEVNPLGGKCDRIFG
RDRLEQLWEANRILLEVAAPVIESVYYTVQGSDFMVVLVNNEGIILKTMGDYQTLSSAER
LNFRQGAVWTEDSVGTNAIGTSLTSGIPIQITGPEHFCSHHHVWTCSAAPIRDPEGHVLG
CLDMSGPYDKMHPHTLGMIVAAAQAIEYQLRRELSKSELELALKKLTTAVDTVNDGIIYI
NKDGIITDANIPACNLLGLSHGKLKGMRFNHVLGGDIASGCLTAGASANGEDFIISAPPG
RLVCSIKTITHNNGTIGGAVAVIRIQKNGAKGPVSYCTGGKMKVAGGPRTDTGSGNGLVR
SSGGVSAGTTSRQANPFNGIIGCSRPICAAINLARRAAACSSTVLLLGESGSGKEVFATS
IHMASDRRQGPFIPVNCASLPSGLIQSELFGYSGGSFTGAKRDGQQGKFELANGGTLFLD
EIGDMPLDMQANLLRVLQEKAVMRVGGSKMIPVDVRVIAATNKDLFQEMQQGRFREDLFY
RINVLCIEIPPLRDRGAGDLQLLTQHLLVSIAARLGRPVCKIDSAAMEMLAEYHWPGNVR
ELANVLEQMLIITDDDVTRVEHLPRYLQKSARDSKGLAGQVSCAPEESRSSNPVSTLEQI
EKQAIREALQCFGGNISRTAQALGIGRNTLYGKLKKYDLND
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggtggtaagttctacacggctgaataaaaagaaaaaactagaaaaatattgggaaggc
tttattacctctgacaaatttgatttaagccagctaaacagtaccatagcttcatcctgg
caaagatgtaaagaggcggaggtaaaccccctgggcggtaagtgtgatcgcatattcggg
cgggaccggctggaacagctgtgggaggccaatagaatacttttggaagtggctgcgcct
gtaattgagtcggtatattacactgttcaggggtctgacttcatggtggtgctggtaaat
aacgagggtattatacttaaaacaatgggtgattatcaaacccttagcagcgcggagcgg
ttaaattttagacagggggccgtttggacggaagattcggtgggtaccaatgccataggc
acctcattgacatccggtattcccatccagatcaccggccctgagcatttttgctcccat
caccatgtctggacttgctcggcagcacccatacgcgatccggaggggcatgtgctgggc
tgcttggatatgtcgggaccctatgataaaatgcacccgcatacgctgggcatgattgta
gcggcggctcaagccattgaataccagctgcgcagagaattgtccaaaagtgaattggaa
ttggcgcttaaaaagttgacaacagcggtagatacggttaacgacggaataatctatatt
aataaagatggaataattaccgatgccaatattcccgcctgcaacttgctgggcctgtcg
catggtaaattaaaggggatgcggttcaatcatgtactgggcggcgatatcgcttccggc
tgcctaacggctggagcttcagcaaatggggaggattttattatctccgctcctccgggc
aggttggtttgctctatcaagaccattacccataataacggcacaataggcggcgctgtg
gctgttatccgtatccaaaagaatggcgctaaagggccagtaagctattgcaccggcggg
aagatgaaagttgccggtggcccaaggactgataccggttccggcaacggccttgttcgg
tcttccggtggggtatctgccggcaccaccagccggcaagccaatcctttcaatggtatt
ataggctgcagccggcctatttgcgctgcgattaatctggcccggcgggcggcggcctgt
tcctccaccgtgctgctgctgggggaaagcggcagtggcaaggaagtatttgccacgtcc
attcatatggcaagtgaccgccgccagggcccctttattccggttaactgtgcatcgctg
cccagcgggttgatccaaagcgagctattcggctatagcggaggatcgtttacaggcgcc
aagcgagacggtcaacagggcaaatttgagctggctaacggcggtacactgtttttagat
gaaatcggcgatatgccgttggacatgcaggccaatttactgcgtgtacttcaggaaaaa
gcggtgatgcgggttggtggcagcaaaatgattcctgtggatgtacgggtgatagccgcc
accaataaggatttgtttcaggagatgcaacagggccgctttcgggaagatcttttttac
cggattaatgtgctttgtattgaaatacctcccttgcgggacaggggcgcaggcgacctg
cagctgctcactcaacatttgctggtttccattgccgccaggctgggaaggccggtatgc
aaaattgactccgcagcaatggagatgctggcggagtaccactggccgggtaatgtgcga
gaactggccaatgtgctggagcagatgctgattatcaccgatgacgatgttacccgggtg
gaacatttaccgcgttacctgcaaaagtcggcccgggattcgaaaggattggccgggcag
gtttcctgtgcaccggaggaatcaagaagcagtaatccggtaagtacactggaacaaata
gagaaacaagctattcgagaggcgctgcagtgttttggcggcaatatcagccgaacggca
caggcgctgggtataggccggaacacactgtatggaaaactaaaaaagtatgatcttaat
gattga
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