Desulfoscipio gibsoniae: Desgi_4195
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Entry
Desgi_4195 CDS
T02657
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgi03009
]
Desgi_4195
Enzymes [BR:
dgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Desgi_4195
Ribosome biogenesis [BR:
dgi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Desgi_4195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AGL03449
UniProt:
R4KLB2
LinkDB
All DBs
Position
complement(4282129..4283016)
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AA seq
295 aa
AA seq
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MYIEYRVVKDNANRKVSQILKTQLKFSRGEIRRIKRCAGLMVNDQTVRLNTLVKEGDLIR
VNFQDEEQPVIPQDIPLDILFEDEHILVVNKPCNMLVHPLSHHVLNTLANGVIYHWQLQG
HNSKFRAVSRLDKDTSGAILIAKSSYICHQLAEQMQNGICRRKYLAVVHGPITANSGIID
LPIGRPYEDSLIFGVTPRGKEAITHFTVMQRFASGSLVKLRLETGRTHQIRVHMKHIGHP
LMGDDLYGGSLDLIQRQALHSWRLQFNHPVTKEIMQLEAPLPDDMTSLINDLKKR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcgaatacagggtagtaaaagataatgctaatcgaaaagtttcacagatactt
aagacccaactaaaattttcccgtggtgaaatacgaaggattaaacgttgtgccggactt
atggtgaacgatcaaaccgttcgtttaaatacattggtaaaagaaggcgatttaatacgg
gtaaattttcaggatgaggaacagccggtgataccccaggatattcccctggatattctc
tttgaggacgagcacatcctggtagtgaacaaaccatgcaatatgctggtacacccgctt
tcccatcatgttctgaataccctggctaacggcgtaatttatcactggcagctgcaaggg
cataatagtaaatttagagcggtcagccggttggataaagatacctccggagccatctta
atcgccaagagcagttacatctgtcatcagcttgccgagcaaatgcaaaacggcatatgc
cggaggaaatacctggcggtggtgcatggcccaataactgcaaattcgggaataattgat
ttaccgattggcaggccctatgaggactcccttatctttggagtaacaccccgtggcaaa
gaagcgatcactcattttaccgtaatgcagcgtttcgccagcggcagtctggtcaaattg
cggttggaaactggtcgtacccaccaaataagagttcatatgaaacatataggccatccc
ttgatgggggacgatttatacgggggcagtttagacctgatccaacgccaggctttacat
agctggcgtttgcaatttaaccatcctgtcacaaaggagatcatgcaactggaggcccct
ctgccggacgatatgacatctttaataaatgatttaaaaaaacggtga
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