KEGG   Desulfoscipio gibsoniae: Desgi_4229
Entry
Desgi_4229        CDS       T02657                                 
Name
(GenBank) restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
dgi  Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgi02048]
    Desgi_4229
Enzymes [BR:dgi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Desgi_4229
Prokaryotic defense system [BR:dgi02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Desgi_4229
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD
Other DBs
NCBI-ProteinID: AGL03480
UniProt: R4KSB2
LinkDB
Position
complement(join(4312119..4313111,4313111..4314757))
AA seq 879 aa
MKIKFDSHQQFQLDAINAIVNIFEGQPRAQGKFEINMSGEQGVLFTELGVGNRLTLDRET
ILANVQKVQEQHNLEKSKFLDGMNFSVEMETGTGKTYVYLRTIWELHIQYGFNKFTIVVP
SVAIREGVLKNIEITWEHFQDIYGNQPFDYWVYNSKQVSSLRQFANANQLQILVINIDAF
NKKDNNVIHKDNDRLSGRKPIEFIQVTNPIVIVDEPQNMESAQAKNAIASLSPLCTLRYS
ATHRNLYNLMYRLDPVKAYDMHLVKRIEVDSILDEPDFNRPFIRVESIKATKTKITARLT
IDVQRGGAVKRTTVSVSKNGVDLFDLTGGREAYQGYIVAGIDAGLGFIAFTNGVTLKTGQ
SIGGYTDEIMKAQIRETLKNHLNKELEIMQMLPEGRRLKVLSLFFIDRVANYAPVDGKIR
LWFEEIYQGLAANPLYKPLHLPPVELVHNGYFAQNQKGVPKDTSGSTKADDEVYELIMQD
KERLLSVKEPLRFIFSHSALREGWDNPNVFQICTLNETRSEIKKRQEIGRGLRLPVDETG
NRVLEEISTRLTVVANESYKDFARALQTEIEEECGVKFDGGRIGNKRERRKAHLKKGWRL
DENFLTLWERIKHKTRYSVEYETADLIVRAARAVRHMSAIESPKIIAQKMGLDITKQGVT
ERMLAVQESNVTYKALQIPDLIGYIQRETELTRGTIADMLIRSGRLGDVMINPQRFLEQA
TRAIRKTLNDIMVDGIKYERIAGAEYEMFLFADPRHEIQGYISRMLEVKKSIYDAIEFDS
DVEYDFARELDSRNDIKLFIKLPRWFKVDTPLGTYNPDWAIVKQAEGEEEKLYLVSETKS
TTDPAKLRESEWDKIRCGKAHFKVLPDVQFKHVKGAFEV
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgaaaataaaatttgatagccaccagcagtttcaactggacgccattaatgccatagta
aatatctttgaaggccagccccgggcacaaggaaagtttgaaataaatatgtccggagag
caaggtgtgctctttactgaattaggtgttggcaatcggctaaccctcgatcgggagaca
attcttgccaatgtgcaaaaggttcaggaacaacacaacctggaaaaatctaagtttttg
gacggtatgaatttttccgtggaaatggagaccggtacggggaaaacttatgtatacttg
cgtaccatttgggaactgcacatacaatatggatttaataaattcaccatcgtggtgccc
agtgtggccattcgtgagggtgtgctgaaaaatatcgaaatcacctgggaacattttcag
gatatctacggtaaccagccctttgattattgggtgtataattccaaacaggtgtcttca
ttaaggcagtttgccaacgccaaccagctgcagattttagtcatcaacatagatgccttc
aataaaaaggacaacaacgtcattcataaagataacgatcggctttcgggacgcaagccc
attgaatttatacaagttactaaccccatagtcattgtagatgagccgcaaaacatggaa
agcgcgcaggcgaagaatgccatcgccagcctgagtcccctgtgcaccctgcggtattca
gccacccaccgtaatctttataatttaatgtatcgcctggacccggttaaggcttacgat
atgcatttagtcaaacggatagaagtagattccattctggatgagcctgatttcaaccgg
cctttcatcagagtggaatcaatcaaagctaccaaaacaaagatcaccgccaggctgacc
attgacgtgcaacggggcggcgcggtcaagcgcactacggtatcggttagcaaaaacggc
gtcgatttgtttgatttgaccggtggccgggaagcgtatcaaggatatatagtggctggt
attgatgccgggctgggttttattgcttttacgaacggggtcaccttgaaaaccggtcag
agcatcggtggttatactgatgaaataatgaaggcgcaaatcagggaaacgttaaaaaac
cacctaaataaagaattggaaataatgcaaatgctgcccgaaggtaggcggcttaaagtg
ttatctttgtttttcattgatcgggtagccaattacgcgccggtggacggtaaaatccgc
ctctggtttgaagagatataccaggggctagcggccaatccactgtacaaaccgctgcat
ctgccgccggtggaactggtgcataacggttattttgctcagaatcaaaaaggggtaccc
aaggacactagcgggagtaccaaagctgatgatgaggtctatgaactgattatgcaggac
aaggaaagattactttccgtaaaagaaccgttgcgctttatttttagccactccgcgctg
cgggagggctgggataaccccaatgtgtttcaaatttgcacgcttaacgaaacccgttcg
gaaattaaaaaacgtcaggaaattgggcgtggtttaaggctaccagtggatgaaacgggc
aaccgggtattggaggaaatatcaacccgcttaactgtggtggccaatgaaagttacaaa
gattttgcccgggcgctgcagaccgagatagaggaagaatgtggcgttaaatttgacggc
ggccgcataggcaacaagcgggaacgccgcaaagcccacctgaaaaaaggctggcggctg
gatgaaaattttctgactctgtgggagcgaataaaacacaaaacccgttattccgttgaa
tatgaaacagcggatctgattgtccgagccgcccgggcagtgcgccacatgtcggctatc
gaaagccccaaaataattgcccaaaaaatgggcctggatattaccaaacaaggggtaacc
gagcgcatgctagcggtgcaggaaagtaatgttacctataaagcgttgcaaatacctgat
ttaataggctatattcagcgggaaaccgaactgactcgcggtaccattgccgatatgctc
atcaggtcgggcaggctgggtgatgtaatgataaatccccagcggttcctggaacaggcc
acccgggcgatacgtaaaacattaaacgatattatggttgatggtattaaatatgaacgt
attgccggggctgaatacgaaatgtttctttttgctgatccccgtcatgaaattcaggga
tatataagccgcatgctggaagtgaaaaaatccatctatgacgcgattgaatttgattct
gatgtggagtatgattttgctcgggaattggacagccgcaacgatatcaagctattcatt
aaactgccgcgctggtttaaagtggacaccccgctgggcacatataatcccgactgggcc
atagttaaacaggcggaaggagaggaagaaaagctatatttggtgagtgaaaccaaatct
accactgacccggccaagttgcgtgaaagcgagtgggataagataagatgcggtaaagct
cactttaaggtgttgccggatgtgcagtttaagcatgtgaagggtgcttttgaagtttaa

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