Desulfoscipio gibsoniae: Desgi_4233
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Entry
Desgi_4233 CDS
T02657
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K19789
DNA repair protein RadD
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_4233
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Desgi_4233
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
SWI2_SNF2
DEAD
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AGL03484
UniProt:
R4KLE3
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Position
complement(4318212..4320110)
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AA seq
632 aa
AA seq
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MEFIYDPHYFLTSSPNIEENKKLREPQKNAYSKAFEHFVIDNKTSHAIIVLPTGVGKTGL
MGLLPYGISKGRVLIITPQLVIKDNVVGSLDPEYPANFWLKYDVFTRIQELPNLIEYEGK
ETKDEWLELTNIVVVNVQKLQERLANSLMNRLPSNFFDLIIIDEAHHSTALTWVEVLRHF
NNAKVIKLTGTPYRTDKKKIFGDITYEYKLSAAMAHGYVKSLEKFFYIPDKLYLTLDDDS
LKQYTVEQILQMGIRDQDWVSRTVAYSPECSEKVIVESVKLLENKLSNQNTVPHKIIAVA
CSIKHAEQIKELYEKHGYKSAIIHSRLSKDDKEKALSDIENHRVNVVINVAMLGEGYDHP
YLSIAAIFRPFRSQLPYAQFIGRILRALPDKEVTRVSDSIAQIICHKELNLDDLWEYYKK
EIQESETIKYLASLNLDNEEDDSYVDKKGKPKDTSYGIATEEGIGKLIGDTYLTTKIIEQ
RKREEEEELEKLKAIQQILNIPIEEARKVIAQSKGISSTIRRPDLFIKRKRTGIDSRIKE
DIVPSLLDQFSLDKESTDLSSCRIFKGKYFWIPINYKNNGAFLAVYINTVLKDMIGAKRQ
DWVTSDWDLAEKKLDEIEEYLIKVLEEFTGQA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggagtttatatatgatcctcattacttcttaacttcttcacctaatatagaagaaaat
aaaaaattgagggaaccacaaaaaaatgcttattctaaagcttttgaacattttgttata
gataacaaaacctcacatgcaatcattgttttaccaacaggtgttggtaaaacaggctta
atggggctcctcccttatgggatatctaagggtcgagtattaattattacaccacaatta
gttattaaagataatgtcgttggttcactcgacccagaatatccagcaaatttttggcta
aaatatgatgttttcaccagaattcaggaattaccaaatttaatcgaatatgaaggtaag
gaaacaaaagatgaatggttagaactaacaaatatagtcgtggttaatgtccaaaaactt
caagaaaggcttgccaacagtcttatgaataggctaccatctaacttttttgacttaata
ataatagatgaagcacatcattccactgcccttacttgggttgaagtgttaaggcacttt
aataacgcaaaagtaattaaacttactggcacaccttacagaacagataagaaaaaaatt
tttggcgacattacttatgaatataagttaagtgctgcaatggctcacggttatgttaaa
agcttggaaaaatttttctatatacctgataaattataccttactcttgatgatgatagt
ttaaaacaatatactgttgagcaaattctccaaatgggcataagagatcaagattgggta
agtcgtactgtagcgtattcaccagaatgttccgaaaaggttatagttgaatcagtaaaa
ctcttagagaataagttatcaaatcaaaacacagtaccacataaaattatcgcggtagct
tgtagcataaaacacgcagaacaaattaaggaactatacgaaaagcatggttataaatcg
gcaattatacatagtagattaagtaaagatgataaggaaaaggcattatcagatattgag
aatcatagagttaatgtggtaataaacgttgccatgctaggagaaggatacgatcaccca
tatttatcaatagctgcaatttttagaccgtttcggtcacagctcccttatgctcaattt
atagggagaattttaagagccctaccagataaagaggtaacacgggtctcagatagtata
gcacaaattatttgtcataaagaactaaaccttgatgatttgtgggagtattacaaaaag
gagattcaagagagtgaaacaattaaatatcttgcctctcttaacttagataatgaagag
gatgattcgtacgttgacaaaaagggtaaaccaaaggatacgagttatggtattgctaca
gaggagggaattggcaaactaataggtgacacttatttaactacaaagattattgaacag
cgaaaacgtgaggaagaagaagaacttgagaaattgaaagccattcaacaaatcttaaat
ataccaattgaagaggcacgcaaagtaattgcccaatcgaaaggcatttcctcaactata
agacggccagacttatttataaaacgaaaaagaaccggcattgattctcgaataaaggaa
gatattgtaccctcattgttagaccagttttccttagataaagaatctacagatttaagc
tcttgtagaatttttaaggggaagtatttttggatacctataaattataagaataacggt
gcgtttctagctgtatacattaatactgtactaaaggatatgattggtgccaaaagacag
gactgggttacatcggattgggatctggctgaaaaaaaattagatgagattgaagaatat
ttaattaaggttttggaggaatttacaggtcaagcgtag
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