Deinococcus gobiensis: DGo_CA0400
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Entry
DGo_CA0400 CDS
T01827
Symbol
topA
Name
(GenBank) Type I topoisomerase, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dgo
Deinococcus gobiensis
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgo03032
]
DGo_CA0400 (topA)
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA0400 (topA)
Enzymes [BR:
dgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DGo_CA0400 (topA)
DNA replication proteins [BR:
dgo03032
]
Prokaryotic type
DNA Topoisomerases
DGo_CA0400 (topA)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DGo_CA0400 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L34e
Motif
Other DBs
NCBI-ProteinID:
AFD24327
UniProt:
H8GVF0
LinkDB
All DBs
Position
419102..420151
Genome browser
AA seq
349 aa
AA seq
DB search
MPSRTDLLAEDYLRREGHDPKKFRYFYPDGRPYRDKAGIARIASLAVPPAYEDVYVAPDA
DAEVQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLSRFAGALPTLKAVTGSDLRAGGLPP
RKVLALMTRLLHVARFRVGSDTYARQHQTYGLSTLRQRHVKVEGNTVVFDFKGKHGVSQH
KAATDRTLSGNIARLLDLPGPWLFQTVDAEGERRRIHAPELNAYLREVIGPFTAKDFRTW
GGTLLAAEYLAEAGVQETERAARKVLVECVKVVAADLGNTPAVTRGSYVCPVIFDRYLEG
KVLDDYEPRTARQEAELEGLTRSEAALSRLLASEKTLRGRSRERRATGA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcaccgacctgctggccgaggactacctgcgccgcgagggccatgacccc
aaaaagttcaggtatttctaccccgacggccggccgtaccgcgacaaggccgggatcgcg
cgcatcgcgtcgctggcggtgccgcccgcctacgaggacgtgtacgtggcccccgacgcc
gacgccgaggtgcaggccttcgggcgcgacgccgccgggcggctgcaataccgttaccac
cccgacttcgtgcaggcgggcgccctcaagaagtggcagcgcctgagccgcttcgccggg
gcgctgcccaccctcaaggccgtgaccggcagcgacctgcgcgcgggcggcctgcccccc
cgcaaggtgctggccctcatgacccggctgctgcacgtggcccggttccgggtgggcagc
gacacctacgcccgccagcaccagacctacggcctgagcaccctgcgccagcggcacgtg
aaggtcgaggggaacacggtcgtcttcgacttcaagggcaagcacggcgtctcgcagcac
aaggcggccaccgaccgcaccctgagcggcaacatcgcgcgcctgctcgacctgcccggc
ccctggctgttccagacggtggacgcggagggcgagcgccgccgcatccatgcgcccgag
ctcaacgcgtacctgcgcgaggtgatcgggccgttcacggccaaggacttccggacctgg
ggcggcacgctgctcgccgccgagtatctggccgaggcgggcgtgcaggaaaccgagcgc
gccgcgcgcaaggtgctcgtggaatgcgtgaaggtcgtggccgccgacctgggcaacacg
cccgccgtcacgcgcggcagctatgtctgcccggtcatcttcgaccgctacctggagggc
aaggtgctcgacgattacgagccgcgcaccgcccggcaggaggccgaactggagggcctg
acccgcagcgaggccgccctgagccgcctgctcgccagcgagaagaccctgcggggccgc
agtcgggagcgccgggccaccggcgcctga
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