KEGG   Deinococcus gobiensis: DGo_CA0556
Entry
DGo_CA0556        CDS       T01827                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC, subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
dgo  Deinococcus gobiensis
Pathway
dgo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DGo_CA0556 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dgo03400]
    DGo_CA0556 (uvrA)
DNA repair and recombination proteins [BR:dgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DGo_CA0556 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DGo_CA0556 (uvrA)
SSDB
Motif
Pfam: ABC_tran AAA_21 UvrA_DNA-bind AAA_29 DnaJ_CXXCXGXG AAA_16 nSTAND1 AAA_33 RsgA_GTPase AAA_25 AAA_22 NACHT MeaB ATPase Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AFD24483
UniProt: H8GWL3
LinkDB
Position
580361..582853
AA seq 830 aa
MRVRGAREHNLKDISVEVPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVSPYARR
LFHQVGAPDVDAVEGLPPAVALQQQRGAPTARSSVGSVTTLSNLVRMLYSRAGDYPEGQG
IVYAEGFSPNTPEGACPECHGLGRVYEVTEASMVPDSALTIRERAVAAWPQAWGGQNQRD
ILVSLGIDVDVPWRDLPRDTRDWILFSDEQPVVPVYPGLTPEATRRAVGRQAPPDYMGTF
SSARRHVLHTFATTESAAMKKRVQAYMIETVCPVCHGKRLRPEALAVTFAGYDITDFSRL
PLTQVAELLRPVAEGREEGHARRVRERPEVAVAAQRLAADLAARLDVLLRLGLGYLHFER
TTPSLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALGGLKAAGNSLF
VVEHDLDVVRRADWLVDVGPGAGEGGGEILYSGPPEGLRDVEGSQTAAYLFRDTRAGPHE
PRAPSGWLELSSVTRHNLRDLSVRFPLGVLTCVTGVSGSGKSTLVSQVLAQTLAAHFGQG
AAPGAEDVEEEGDDVPAATARLGGDVGTLSRLVRVDQKPIGRTPRSNMATYTGLFDHVRK
LFAAAPLAKKRKYSAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGARYNA
ETLEVEVRGQTIADVLGMTVDTAHTFFGDERPIFQALDTLREVGLGYLRLGQPATELSGG
EAQRIKLATELQRAARGHAVYILDEPTTGLHPADVERLTRQLARLVEAGHTVIAVEHDLQ
VVTGSDWVLDIGPGAGEEGGRVVAQGPPAEVARVPGSRTAPYLARALGLG
NT seq 2493 nt   +upstreamnt  +downstreamnt
gtgcgggtgcgcggggcacgcgagcacaacctcaaggacatctcggtggaggtgccgcgc
gacgccctggtggtctttaccggggtgtcggggtcgggcaagtcgtcgctggccttcggc
acgctgtacgccgaggcgcagcgtcgttacctcgaatcggtgtcgccctacgcccggcgc
ctgttccatcaggtcggtgcgccggacgtggacgcggtcgagggcctgcccccggcggtc
gccctgcaacagcagcgcggcgcacccacggcccgctcgtcggtgggcagcgtcaccacc
ctgtcgaacctcgtgcggatgctgtactcgcgcgccggggactaccccgagggccagggc
atcgtgtacgccgaaggtttctcgcccaacacgcccgagggggcctgccccgagtgccac
ggcctgggccgggtgtacgaggtcaccgaggcctcgatggtccccgactccgcgctgacc
atccgcgagcgggcggtcgccgcgtggccgcaggcctggggcgggcagaaccagcgcgac
atcctggtgtcgctgggcatcgacgtggacgtgccctggcgcgacctgccccgggacacc
cgcgactggatcctcttcagcgacgagcagccggtggtgccggtgtaccccggcctcacg
cccgaggcgacccggcgggcggtggggcgacaggcgccgcccgattacatgggcaccttc
agcagcgcgcggcgccacgtgctgcacaccttcgccaccaccgagagcgcggccatgaaa
aagcgcgtgcaggcctacatgatcgagaccgtctgcccggtgtgccacggcaagcggctg
cggcccgaggcgctggcggtgacctttgccgggtatgacatcaccgacttctcgcgcctg
ccgctgacgcaggtggccgagctgctgcgcccggtggccgagggccgcgaggaaggccac
gcccggcgcgtgcgcgagcggcccgaggtcgccgtcgccgcgcagcgcctggccgccgac
ctcgccgcgcggctggacgtgctgctgcggctggggctgggctacctgcacttcgagcgc
accacccccagcctctcgccgggcgagttgcagcgcctgcgcctcgccacgcagctctac
tccaacctgttcggggtggtgtacgtgctcgacgagccgtccgccgggctgcaccccgcc
gacaccgaggcgctgctctcggcgctgggcggcctgaaggcggcgggcaactcgctgttc
gtcgtcgagcacgacctggacgtggtgcgccgcgccgactggctggtggacgtggggccg
ggggcgggcgagggcggcggcgagatcctctacagcgggccgccggagggcctgcgggac
gtggaagggtcgcagaccgccgcctacctcttccgggacacgcgggccgggccgcacgaa
ccgcgcgcaccgtcgggctggctggaactgagcagcgtgacgcgccacaacctgcgggac
ctgagcgtgcgctttccgctcggggtgctgacctgcgtgaccggcgtgtcggggtcgggc
aagtccacgctggtcagtcaggtgctggcgcagaccctcgcggcgcacttcgggcagggc
gcggcgcccggggcggaggatgtggaggaagaaggcgacgacgtgccggccgccaccgcg
cgtctgggcggcgacgtgggcacgctctcgcggctcgtgcgggtggaccagaagcccatc
gggcgtacgccgcgcagcaacatggcgacatataccggactgttcgaccacgtgcgcaag
ctcttcgcggcggcgccgctggcgaagaagcgcaaatacagtgcgggccgcttctccttc
aacgtgaagggcgggcgctgcgagcactgccagggcgagggctgggtgatggtcgaactg
ctgttcctgccgagcgtgtacgcgccctgcccggtatgccatggcgcacgctacaacgcc
gagacgctggaggtcgaggtccggggccagaccatcgcggacgtgctcggcatgacggtg
gacacggcccacacctttttcggggacgagcgtcccatcttccaggcgctcgacacgctg
cgcgaggtggggctgggctacctgcggctggggcagcccgccaccgagctctcgggcggc
gaggcgcagcgcatcaagctggcgacagagttgcagcgcgcggcgcgcggccacgcggtc
tatatcctcgacgagccgacgaccggcctgcaccccgccgatgtcgagcgcctgacccgg
caactcgcgcggctggtcgaggcgggccacaccgtgatcgccgtcgaacacgacctccag
gtcgtgaccgggagcgactgggtactcgacatcggccccggcgcgggcgaggagggcggc
cgggtggtcgcgcagggcccgcccgccgaggtggcccgcgtgccggggagccgcaccgcc
ccgtatctggcccgggcgctcggactgggctga

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