Deinococcus gobiensis: DGo_CA0556
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Entry
DGo_CA0556 CDS
T01827
Symbol
uvrA
Name
(GenBank) Excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DGo_CA0556 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA0556 (uvrA)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DGo_CA0556 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DGo_CA0556 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
AAA_33
RsgA_GTPase
AAA_25
AAA_22
NACHT
MeaB
ATPase
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AFD24483
UniProt:
H8GWL3
LinkDB
All DBs
Position
580361..582853
Genome browser
AA seq
830 aa
AA seq
DB search
MRVRGAREHNLKDISVEVPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVSPYARR
LFHQVGAPDVDAVEGLPPAVALQQQRGAPTARSSVGSVTTLSNLVRMLYSRAGDYPEGQG
IVYAEGFSPNTPEGACPECHGLGRVYEVTEASMVPDSALTIRERAVAAWPQAWGGQNQRD
ILVSLGIDVDVPWRDLPRDTRDWILFSDEQPVVPVYPGLTPEATRRAVGRQAPPDYMGTF
SSARRHVLHTFATTESAAMKKRVQAYMIETVCPVCHGKRLRPEALAVTFAGYDITDFSRL
PLTQVAELLRPVAEGREEGHARRVRERPEVAVAAQRLAADLAARLDVLLRLGLGYLHFER
TTPSLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALGGLKAAGNSLF
VVEHDLDVVRRADWLVDVGPGAGEGGGEILYSGPPEGLRDVEGSQTAAYLFRDTRAGPHE
PRAPSGWLELSSVTRHNLRDLSVRFPLGVLTCVTGVSGSGKSTLVSQVLAQTLAAHFGQG
AAPGAEDVEEEGDDVPAATARLGGDVGTLSRLVRVDQKPIGRTPRSNMATYTGLFDHVRK
LFAAAPLAKKRKYSAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGARYNA
ETLEVEVRGQTIADVLGMTVDTAHTFFGDERPIFQALDTLREVGLGYLRLGQPATELSGG
EAQRIKLATELQRAARGHAVYILDEPTTGLHPADVERLTRQLARLVEAGHTVIAVEHDLQ
VVTGSDWVLDIGPGAGEEGGRVVAQGPPAEVARVPGSRTAPYLARALGLG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtgcgcggggcacgcgagcacaacctcaaggacatctcggtggaggtgccgcgc
gacgccctggtggtctttaccggggtgtcggggtcgggcaagtcgtcgctggccttcggc
acgctgtacgccgaggcgcagcgtcgttacctcgaatcggtgtcgccctacgcccggcgc
ctgttccatcaggtcggtgcgccggacgtggacgcggtcgagggcctgcccccggcggtc
gccctgcaacagcagcgcggcgcacccacggcccgctcgtcggtgggcagcgtcaccacc
ctgtcgaacctcgtgcggatgctgtactcgcgcgccggggactaccccgagggccagggc
atcgtgtacgccgaaggtttctcgcccaacacgcccgagggggcctgccccgagtgccac
ggcctgggccgggtgtacgaggtcaccgaggcctcgatggtccccgactccgcgctgacc
atccgcgagcgggcggtcgccgcgtggccgcaggcctggggcgggcagaaccagcgcgac
atcctggtgtcgctgggcatcgacgtggacgtgccctggcgcgacctgccccgggacacc
cgcgactggatcctcttcagcgacgagcagccggtggtgccggtgtaccccggcctcacg
cccgaggcgacccggcgggcggtggggcgacaggcgccgcccgattacatgggcaccttc
agcagcgcgcggcgccacgtgctgcacaccttcgccaccaccgagagcgcggccatgaaa
aagcgcgtgcaggcctacatgatcgagaccgtctgcccggtgtgccacggcaagcggctg
cggcccgaggcgctggcggtgacctttgccgggtatgacatcaccgacttctcgcgcctg
ccgctgacgcaggtggccgagctgctgcgcccggtggccgagggccgcgaggaaggccac
gcccggcgcgtgcgcgagcggcccgaggtcgccgtcgccgcgcagcgcctggccgccgac
ctcgccgcgcggctggacgtgctgctgcggctggggctgggctacctgcacttcgagcgc
accacccccagcctctcgccgggcgagttgcagcgcctgcgcctcgccacgcagctctac
tccaacctgttcggggtggtgtacgtgctcgacgagccgtccgccgggctgcaccccgcc
gacaccgaggcgctgctctcggcgctgggcggcctgaaggcggcgggcaactcgctgttc
gtcgtcgagcacgacctggacgtggtgcgccgcgccgactggctggtggacgtggggccg
ggggcgggcgagggcggcggcgagatcctctacagcgggccgccggagggcctgcgggac
gtggaagggtcgcagaccgccgcctacctcttccgggacacgcgggccgggccgcacgaa
ccgcgcgcaccgtcgggctggctggaactgagcagcgtgacgcgccacaacctgcgggac
ctgagcgtgcgctttccgctcggggtgctgacctgcgtgaccggcgtgtcggggtcgggc
aagtccacgctggtcagtcaggtgctggcgcagaccctcgcggcgcacttcgggcagggc
gcggcgcccggggcggaggatgtggaggaagaaggcgacgacgtgccggccgccaccgcg
cgtctgggcggcgacgtgggcacgctctcgcggctcgtgcgggtggaccagaagcccatc
gggcgtacgccgcgcagcaacatggcgacatataccggactgttcgaccacgtgcgcaag
ctcttcgcggcggcgccgctggcgaagaagcgcaaatacagtgcgggccgcttctccttc
aacgtgaagggcgggcgctgcgagcactgccagggcgagggctgggtgatggtcgaactg
ctgttcctgccgagcgtgtacgcgccctgcccggtatgccatggcgcacgctacaacgcc
gagacgctggaggtcgaggtccggggccagaccatcgcggacgtgctcggcatgacggtg
gacacggcccacacctttttcggggacgagcgtcccatcttccaggcgctcgacacgctg
cgcgaggtggggctgggctacctgcggctggggcagcccgccaccgagctctcgggcggc
gaggcgcagcgcatcaagctggcgacagagttgcagcgcgcggcgcgcggccacgcggtc
tatatcctcgacgagccgacgaccggcctgcaccccgccgatgtcgagcgcctgacccgg
caactcgcgcggctggtcgaggcgggccacaccgtgatcgccgtcgaacacgacctccag
gtcgtgaccgggagcgactgggtactcgacatcggccccggcgcgggcgaggagggcggc
cgggtggtcgcgcagggcccgcccgccgaggtggcccgcgtgccggggagccgcaccgcc
ccgtatctggcccgggcgctcggactgggctga
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