Deinococcus gobiensis: DGo_CA0896
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Entry
DGo_CA0896 CDS
T01827
Symbol
fpg
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DGo_CA0896 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA0896 (fpg)
Enzymes [BR:
dgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DGo_CA0896 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DGo_CA0896 (fpg)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DGo_CA0896 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFD24823
UniProt:
H8GYH0
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All DBs
Position
989766..990590
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AA seq
274 aa
AA seq
DB search
MPELPEVETTRRKIEPLLRGQIITAVRHEPSHRYQGTQAAVGRRVKGLTRRGKYLMLQLA
APGAAESEPHDLELIVHLGMTGGFRLEPGKHTRVTLETGAGALHFDDPRRFGKMVVVRPG
EYAGMPTLSGMGPEPLSEDFREDEFVARAATAGAVKPWLLSQKPVSGVGNIYADEALWHA
RIHPAQTALNADEASRLYRAVREVMAQAVEAGGSSLGNGEGNYRQHDGEQGGFQGRHQAY
GRAGQPCARCGTPIAKIVLGQRGTHFCPQCQVVR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtcgaaaccacccgccgcaagatcgagccgctgctgcgcggc
cagatcatcaccgccgtccggcacgagccgtcgcaccgctaccagggcacccaggcggcg
gtgggccggcgcgtgaagggcctgacccgccggggcaagtacctgatgctccagctcgcc
gcgccgggggcggccgagagcgagccccacgacctcgaactcatcgtgcatctggggatg
acgggaggcttccggctggagccgggcaagcacacccgcgtcacgctggagaccggcgcg
ggcgcgctgcatttcgacgacccccggcgcttcggcaagatggtggtcgtgcgtcccggc
gagtacgcgggcatgccgaccctctcgggcatggggcccgagccgctgtcggaggacttc
cgggaggacgagttcgtggcgcgcgcggccacggcgggggccgtgaagccctggctgctg
tcgcagaagcccgtgagcggtgtgggcaacatctacgccgacgaggcgctgtggcacgcc
cgcatccacccggcccagaccgccctgaacgcggacgaggcctcgcggctgtaccgcgcc
gtgcgcgaggtgatggcccaggcggtcgaggcgggcggcagttcgctgggcaacggcgag
ggcaactaccgccagcacgacggcgagcagggcggctttcagggccggcatcaggcctat
ggccgggccgggcagccgtgcgcgcgctgcggcacccccatcgccaagatcgtcctgggg
cagcgcggcacgcatttttgcccgcaatgtcaggtcgtgcgctga
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