Deinococcus gobiensis: DGo_CA0910
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Entry
DGo_CA0910 CDS
T01827
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03410
Base excision repair
dgo03430
Mismatch repair
dgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DGo_CA0910 (recJ)
03430 Mismatch repair
DGo_CA0910 (recJ)
03440 Homologous recombination
DGo_CA0910 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA0910 (recJ)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DGo_CA0910 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DGo_CA0910 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DGo_CA0910 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C_Deinoc
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFD24837
UniProt:
H8GYI4
LinkDB
All DBs
Position
complement(1002915..1004945)
Genome browser
AA seq
676 aa
AA seq
DB search
MRTWNVSPALAQVLAGRGLTPEMLEAPLRPSPNPALHEAARQIVAAVRGKKRIRIHGDYD
ADGVSATAVLVLGLRALGADVHGFIPHRLNEGYGLHPDRVPEHAQAADLLVTVDCGVTNL
EEVRALLEAGTAVIVTDHHAPGADFPACLVVHPHLTDGFDAGVHNLTGAGVAYHLLWAVR
AELGLDEPRDLAPLATLGTIADVAPLLGENRALVRAGLEALPHTTLPGLRALLRQTGVPR
PTARDVAFVLAPRLNAAGRMGAADLALELLTTPSAAEAERLVVYLDTLNLERRRLQDDMF
AQALALADPADPALVLTHPDWHPGVMGIVASKLLETFYRPVYIVAQGKGSVRSTPGISAV
GGLRESGDLLKRYGGHPAAAGFAMDPAQFAALRGRLHEYARRFPVPVPAVRLDAALPPRW
ASPELEADTLRLEPFGEGHRRPLWHLRAELEGQRLVGKRGDSLQFQLGGLKGVRHGAGAT
QPGECDLGAELGTNEWRGRTSLEWRAEALRPAAPLDLEGQAEGQETDLPRLDPQEAVTHL
RAGAAAYAENGVVPYLTGQVPGLRLLGSGDRLPTDTTEVILYALPAEADLRRWLAQGRVA
FAWGPKTLKDLESAGLTPPSPAVSETAAEAYRRWQWGHHYRVLSDAGWAASVRAMLGEDV
GEAARVPEPATLAAHP
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacctggaacgtgtcgcccgcgctggcgcaggtgctcgccgggcgcggcctgacc
cccgagatgctggaagcgccgctgcggcccagccccaacccggcgctccacgaggccgcg
cggcagatcgtggcggcggtcaggggcaagaagcgtatccgtatccacggcgactacgac
gccgacggcgtgagcgcgaccgccgtgctcgtgctggggctgcgggcgctgggggccgac
gtacacggcttcattccccaccggctgaacgagggctacggcctccacccggaccgcgtg
cccgaacacgcgcaggccgccgacctgctggtgacggtggactgcggcgtcaccaatctg
gaggaggtgcgcgcgctgctggaggcgggcacggccgtgatcgtcaccgaccaccacgca
ccgggcgccgactttccggcgtgtctggtggtgcacccgcacctcaccgacggcttcgac
gcgggggtgcacaacctgaccggcgccggggtggcctaccacctgctgtgggcggtgcgc
gccgagctgggcctggacgagccgcgcgacctcgccccgctggcgacgctgggcacgatt
gcggacgtggccccgctgctgggcgagaaccgggcgctggtgcgcgccgggctggaggcg
ttgccgcacaccacgctgcccggcctgcgcgccctgctgcggcagaccggcgtgccccgg
ccgaccgcccgcgacgtggccttcgtgctcgcgccgcgcctgaacgccgccgggcgtatg
ggggccgccgacctcgcgctggagctgctgaccaccccgagcgccgccgaggccgagcgg
ctggtggtgtacctcgacaccctgaacctggagcgccgccgattacaggacgacatgttc
gcgcaggccctcgccctggccgacccggccgacccggcgctggtcctgacccaccccgac
tggcaccccggcgtgatgggcatcgtggcgagcaagctgctggagaccttctaccggccg
gtgtacatcgtggcgcagggcaaggggtcggtgcgcagcacgcccggcatcagtgcggtg
gggggcctgcgcgagagcggcgacctcctcaagcgctacgggggtcaccccgccgccgcc
gggttcgcgatggacccggcccagtttgcggcgctgcggggccgcctgcacgagtacgcg
cggcgctttccggtgccggtgccggccgtgcgcctcgacgccgcgctgcccccccgctgg
gccagccccgagctggaagccgacacgctgcggctcgaacccttcggtgagggccaccgc
cggccgctgtggcacctgcgcgccgagctggaggggcagcggctggtgggcaagcgcggc
gacagcctgcaattccagctcggcggcctcaagggcgtgcgccacggggccggggccaca
cagccgggcgagtgcgacctgggggccgaactgggcacgaacgagtggcgtggccgcacc
agcctggaatggcgcgccgaggccctgcgcccggccgcgccgctggacctggagggtcag
gccgagggccaggagacggacctgccccgcctggacccgcaggaggcggtcacgcacctg
cgcgccggggcggcggcctacgccgagaacggcgtggtgccctacctgacaggccaggtg
ccggggctgaggctgctgggttccggcgaccgtctgcccactgacacgaccgaggtcatc
ctgtacgccctgcccgccgaggccgacctgcggcgctggctcgcgcagggccgggtggcc
ttcgcctggggtcccaagaccctgaaggacctggaaagcgccggtctaaccccgcccagc
ccagccgtatcggaaactgccgccgaggcctaccgccgctggcagtggggccaccattac
cgcgtcctgagtgatgccggctgggcggcctccgtgcgggcgatgctcggcgaggatgtg
ggggaggcggccagggtgccggaacccgccaccctggccgcccacccctag
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