Deinococcus gobiensis: DGo_CA1566
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Entry
DGo_CA1566 CDS
T01827
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DGo_CA1566 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgo03021
]
DGo_CA1566 (rho)
03019 Messenger RNA biogenesis [BR:
dgo03019
]
DGo_CA1566 (rho)
Transcription machinery [BR:
dgo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DGo_CA1566 (rho)
Messenger RNA biogenesis [BR:
dgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DGo_CA1566 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
NACHT
ATPase_2
Spore_III_AA
AAA
AAA_24
AAA_14
MMR_HSR1
nSTAND_NTPase5
AAA_16
FeoB_N
ARMH5
Motif
Other DBs
NCBI-ProteinID:
AFD25493
UniProt:
H8GUX6
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All DBs
Position
1693642..1694781
Genome browser
AA seq
379 aa
AA seq
DB search
MERQASAEGQSLARGYLDISADGYGFLQADLLDPQSRTVLVTAGLIKQFHLRTGDEVIGR
ARKPRENERFGSLVRVEAINGLDPEAARKRPRFDDLTPTFPDAQLVLEDPGTDDTLSLRV
VDLLVPIGRGQRALIVAPPKAGKTTLLKKIANSIVKNYPDVTVMVLLVDERPEEVTDFRE
SVQGAQVIASTFDEPPQHHVRVAEFVHERARRIVEEGGHVVILLDSITRLARANNLVTPP
TGRTLSGGLDSNALHWPKRFLGAARNIREGGSLTILATALVETGSRMDDVIFEEFKGTGN
AELVLSRRLEERRIFPAMDILKSGTRREELLLQPEVLKKMWLMRKVISDMDPADAMEMLL
SRMGKTRNNVEFLQALAGG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccaggccagcgccgagggccagagcctcgcgcgcggctaccttgacatcagc
gccgatggctacggcttcttgcaggccgacctcctcgacccccagagccgcacggtgctc
gtcaccgccggcctgatcaagcagttccacctgcggaccggcgacgaggtcatcgggcgc
gcccgcaagccgcgcgagaacgagcgcttcggctcgctcgtgcgggtcgaggccatcaac
ggcctggaccccgaggccgcccgcaagcgcccgcgcttcgacgatctcacgccgaccttc
cccgacgcgcagctggtcctcgaggaccccggcaccgacgacaccctgagcctgcgcgtg
gtggacctgctcgtgcccatcgggcggggtcagcgcgcgctcatcgtcgcgccgcccaag
gccggcaagaccacgctgctcaagaagatcgccaactccatcgtcaagaactaccccgac
gtgacggtgatggtgctgctcgtggacgagcgccccgaggaggtcaccgacttccgcgag
agcgtgcagggcgcgcaggtcatcgccagcaccttcgacgagccgccgcagcaccacgtg
cgcgtggccgagttcgtgcacgagcgggcccggcgcatcgtcgaggagggcgggcacgtg
gtcatcctgctcgactcgatcacccgtctggcgcgcgcgaacaacctcgtcacgccgccg
accgggcgcaccctctcgggcggtctggattccaacgcgctgcactggcccaaacgcttc
ctgggcgcggcgcgcaacatccgcgaggggggcagcctgaccatcctggcgaccgccctc
gtcgagaccggctcgcgcatggacgacgtgatcttcgaggagttcaagggcaccggcaac
gccgaactcgtgctctcgcgccgcctcgaagagcgccgcatcttccccgcgatggacatc
ctcaagtcgggcacccgccgcgaggaactgctgctgcaacccgaagtgctcaagaagatg
tggctgatgcgcaaggtcatttccgacatggaccctgccgacgcgatggagatgctgctc
tcgcgcatgggcaagacgcgcaacaacgtcgagttcctgcaagcgctggccggtggctga
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