Deinococcus gobiensis: DGo_CA1825
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Entry
DGo_CA1825 CDS
T01827
Symbol
recD
Name
(GenBank) Helicase RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DGo_CA1825 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA1825 (recD)
Enzymes [BR:
dgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DGo_CA1825 (recD)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DGo_CA1825 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
TraI_hel_assoc_N
AAA_22
nSTAND3
AAA_28
AAA_16
AAA
AAA_25
PhoH
NAT10_TcmA_helicase
NPHP3_N
NTPase_1
ETF_alpha
AAA_18
KTI12
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AFD25752
UniProt:
H8GWU6
LinkDB
All DBs
Position
complement(1967814..1969922)
Genome browser
AA seq
702 aa
AA seq
DB search
MTVASPTEPFRVSGGVNKVRFRADSGFTVMTARIRNDEGEDPDATVIGLMPPLEAGDTFS
ADVLLEEHREYGHQYRVLNMVLEATPADLTEAGVAAYLEARVGGVGKVLAARLAKAFGAE
AFDLLEHDPQRLLQVPGVTQSTLHKMVSSWSQQGLERRLLAGLQGLGLSISQAQRAVKHF
GEAALERLQADLFALTEVEGIGFLTADKLWQGAGGSLDDPRRLTAAAVYALQQAAQQSGH
SFLPRDRAERGVAHYTRVSPEQARLAVETAVELGRLKDDSVGDTSRIYLPPVLRAEKKLA
TLVRTLLATPPGGDEWTVTVGAEVGLSDEQASVLHLMEEHRLVVLTGGPGTGKSTTTRAV
ADLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYGPAGFRHNHLEPAPYDLLI
VDEVSMMGDGLMLSLLAAVPPGARVLLVGDTDQLPPVDAGLPLLALAQVAPTVTLTQVYR
QAAENPIIRAAHGLLHARAPEWGDPRLTLTETEPDVGARRVALMVRDLGGPAAVQVLTPM
RKGPLGMDALNAQLQSLFNPGEGGVRIAEGHARPGDTVVQTKNDYTNEIFNGTLGTVLKA
EGGRLTVDFDGNVVDLAGAELFNLQLGYALTVHRAQGSEWPQVLGVLHEAHMPMLSRNLV
YTALTRARDRFHAAGSASAWVRAAGRQREARNTALLERIQTR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagcctccccaaccgagccgttccgggtgtccgggggcgtaaacaaagtgcgc
ttccgggccgacagcggcttcaccgtcatgaccgcccggattcgcaacgacgagggcgag
gaccccgacgccaccgtcatcggcctgatgccgccgctggaggcgggcgacaccttcagc
gccgacgtgctgctcgaagaacaccgcgagtacggccaccagtaccgcgtgctgaacatg
gtcctggaggccacgcccgccgacctgaccgaggccggggtcgccgcctatctcgaagcg
cgcgtgggcggggtgggcaaggtgctggccgcccggcttgccaaggctttcggggccgag
gccttcgacctgctggagcacgacccgcagcgcctcttgcaggtgccgggcgtcacccag
agcaccctgcacaagatggtgtcgagctggagccagcaggggctggagcggcggctgctc
gcggggctccagggcctgggcctgagcatctcgcaggcgcagcgggccgtgaagcacttc
ggcgaggcggccctggagcgcctccaggccgacctcttcgcgttgaccgaggtcgagggc
atcgggttcctgaccgccgacaagctgtggcagggcgcgggcggctcgctcgacgacccc
cgccgtctcacggccgccgccgtatacgcgctgcaacaggccgcgcagcagagcggccac
agcttcctgccgcgcgaccgggccgagcgcggcgtggcgcattacacccgcgtctcgccc
gagcaggcccggctggcggtcgagacggcggtcgaactcggccgcctcaaggacgacagc
gtgggcgacaccagtcgcatctacctgccgcccgtgctgcgcgccgagaagaagctcgcc
acgctggtccgcaccctgctcgccacgccccccggcggcgacgagtggacggtcacggtg
ggcgcggaggtcggcctctcggacgagcaggccagcgtgctgcatctcatggaagagcac
cggctggtcgtgctgaccggcggccccggtaccggcaagagcacgaccacccgcgcggtc
gccgacctcgccgagtcgctggggctggaggtcgggctgtgcgcccccaccggcaaggcg
gcgcggcggctgggcgaggtgacgggccgcacggcgagcacggtccaccgcctgctgggc
tacggcccggcggggttccggcacaaccacctcgaacccgcaccctacgacctgctcatc
gtggacgaggtctcgatgatgggcgacggcctgatgctctcgctgctcgcggcggtgccg
ccgggcgcgcgggtgctgctcgtgggcgacaccgaccagcttccgccggtagacgccggg
ctgcccctgctggcgctggcacaggtggccccgaccgtcacgctgacgcaggtctaccgt
caggcggccgagaaccccatcatccgcgcggcgcacggcctgctgcacgcccgggccccc
gaatggggcgacccccgcctgaccctcaccgagaccgagccggacgtgggcgcgcgccgc
gtggccctgatggtgcgtgacctcggcggcccggcggcggtgcaggtgctcacgcccatg
cgcaaggggccgctgggtatggacgcattgaacgcgcagctccagagcctgttcaaccct
ggtgagggcggcgtgcgtatcgccgagggccacgcccgccccggcgacaccgtcgtgcag
accaagaacgactacaccaacgagatcttcaacggcacgctgggcacggtcctcaaggcc
gaggggggccgcctgacggtggatttcgacggcaatgtggtggacctcgcgggcgcggaa
ctgttcaacctgcaactcggctacgcgctgacggtccaccgcgcgcagggcagcgagtgg
ccgcaggtcctcggcgtgctgcacgaggctcacatgccgatgctctcgcgcaatctggtc
tacaccgccctgacgcgcgcccgcgaccgcttccatgccgccggctcggcttcggcctgg
gtgcgggcggcgggccgtcagcgcgaggcccgcaacacggcgctgctggaacgcatccag
acgaggtga
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integrated database retrieval system
