Deinococcus gobiensis: DGo_CA2162
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Entry
DGo_CA2162 CDS
T01827
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dgo
Deinococcus gobiensis
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgo03016
]
DGo_CA2162 (truB)
Enzymes [BR:
dgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DGo_CA2162 (truB)
Transfer RNA biogenesis [BR:
dgo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DGo_CA2162 (truB)
Prokaryotic type
DGo_CA2162 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFD26089
UniProt:
H8GYP2
LinkDB
All DBs
Position
2296948..2297907
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AA seq
319 aa
AA seq
DB search
MPVIAVDKPLNLTSHDVVARARRLRGTKRVGHTGTLDPLATGVLVLCVDESTKVVQFMER
DRKAYLAWISLGAGTPTLDAEGPVEERADVPTPDEAQVRNVLAGFLGPQEQVPPQYSALQ
IGGQRAYAVARAGGALDLPARSVEIHSLDLLGIFPSVGASPQRFSPTPAGWAPDPAGRAF
SLPPALGDFPTLLVRAEVGSGTYLRSLARDVGAALGVPAHLGGLVRTRAGRYDLADTVAL
DDLAGAAGVGDLAALDFPVVEADERMARELRQGKRPAHPVAGRQVVTLRGDLVAVVDGDG
ERLKVVRVWAEPDAGAPQG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcatcgccgtggacaaacccctgaacctcacctcgcacgatgtggtcgcccgc
gcgcggcggctgcgcggcacgaagcgggtgggccacaccggcaccctcgacccgctggcg
accggcgtgctcgtgctgtgcgtggacgagagcacgaaggtcgtgcagttcatggagcgc
gaccgcaaggcctacctcgcctggatttcgttgggcgcgggcacccccaccctcgacgcc
gagggaccggtggaggagcgggccgacgtgcccacacccgacgaggcccaggtccggaac
gtgctcgcgggcttcctggggccgcaggagcaggtgcccccgcagtacagcgccctccag
atcggcgggcagcgggcctacgcggtggcgcgggccgggggggcgctcgacctgcccgcc
cgctcggtcgagatccattcgctggacctgctggggatctttcccagcgtgggggcgtcg
ccgcagcgcttctcccccaccccggccggctgggcgccggacccggcaggccgcgccttt
tccctgcccccggcgctgggcgactttccgacgctgctcgtgcgggcggaggtcggcagc
ggcacctacctgcgctcgctggcgcgcgacgtgggggcggcgctgggcgtgcccgcgcac
ctgggcgggctggtgcgcacccgcgcgggccgttacgacctcgcggacaccgtggcgctc
gacgacctcgccggggcggcgggcgtgggcgacctcgccgcgctggacttcccggtcgtc
gaggccgatgaacggatggcccgcgagctgaggcagggcaagcggcccgcgcacccggtc
gccggacggcaggtcgtgaccctgcgcggcgacctcgtggcggtggtggacggcgacggc
gagcggctcaaggtggtgcgcgtctgggccgagccggacgccggggcgccgcagggctga
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