Deinococcus gobiensis: DGo_CA2511
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Entry
DGo_CA2511 CDS
T01827
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03030
DNA replication
dgo03430
Mismatch repair
dgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGo_CA2511 (dnaE)
03430 Mismatch repair
DGo_CA2511 (dnaE)
03440 Homologous recombination
DGo_CA2511 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgo03032
]
DGo_CA2511 (dnaE)
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_CA2511 (dnaE)
Enzymes [BR:
dgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGo_CA2511 (dnaE)
DNA replication proteins [BR:
dgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DGo_CA2511 (dnaE)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DGo_CA2511 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
DUF2201
Motif
Other DBs
NCBI-ProteinID:
AFD26438
UniProt:
H8GSH7
LinkDB
All DBs
Position
complement(2669773..2673777)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTAPDAAPASHIHLPDGSCCKPKRFAHLHQHTQYSLLDGAAKLKDLLKWAKEVTPEGQTP
ALAMTDHGNMHGAVHFYNYATGMGVKPIIGYEAYVVPGQGTRRDRTRGQDGEKGIFHLTL
LARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLQEHHKGVIAFSGCLGSEVQQLLMQGR
EADAKARLLWYRDLFGENYYIEIQDHGLPEQRKNNPILKAWAQELGIGMVATNDGHYVKK
SDATAHETLLAIQTKATLADENRFKFPCDEFYVKDLEEMQAALPVAEWGEEVFDNTAMIA
DLCNVELPVGKKRVYQMPALPIPEGRTMPEELRVQTYRGMVKRYPAHATEGLLRDYAARS
LAELGADDAARVLARVPGCDAASCDLETLLTLLAFLGSEWEARGKAAGEKYTPYPALVKM
EEEAVSGILPPYAYEDCRRAQGRDSDTSIELDPDADEGETTRGHHRHALTILRRAEYELS
VINNMGFPDYFLIVADYINWAKDHDISVGPGRGSGAGSLVAYAMRITNLDPLEFELLFER
FLNPDRISMPDFDIDFNDARRMEVIEYVRGKYGDDKVAMIATFGTMASKACLKDVARVMG
LEYAKVDKVSKLIPIKFGKSYSLEQARESVPDIAQMLNEDAQLLEAYEFAQKLEGLTRHA
SVHAAGVVIGRDQLTDLVPVMRDTSGEGMVCQYDMKAVEDIGLIKMDFLGLRTLSFLDEA
RRIMRESQKIDIDFDAIPFDDEKTYALMSRGDTKGVFQLEGAGIADASRRLKPRRLADII
ALSALYRPGPMENIPTYVRRHHGVEDVDYVRDGFPTSAQYLEKILAETYGIPVYQEQIMQ
IASEVAGFSLGGADLLRRAMGKKDVAEMAKQRDLFVEGAKGNEVPKEEANKLFDLLDAFA
NYGFNKSHSAAYGVITYQTAWLKANYPVEFMAALLTVERRDSDKVAEYVSDARKMDVRVL
SPDINRSSSDFAVQGEEILFGLYAIKGLGEAAVQKILEERERGGAYASLSDFCSRLGNKV
CNRKALESLIKSGAFDAFGERRQLLESVDDALEDAAGTAEINAKAQSGMSMMFGFEEVKK
ERPLRSGVTPLTDLERLKIEKDALGLYISGHPLEQHEGLREAASCRISDLDAWFTTQSVA
PGKRIKAVLAGMIEGVVKKPTKSGGMMARFILADESGQTELVAFSRAYDRIQDKLVNDTP
ALVIVELESEDGGLRAIAEEVVGIEQLAEVPKVMYVTIDLETASPDAVGEFQSVLDEHAG
SMPTYLRLETPEQFVLYQLDHGMGSPEAIRVLNTTFAWASAYLAYDQQTILGRFAPKPPA
WMNRQNGNGGGMRA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccagacgccgctcctgcctcacatatccacctgccggacggctcctgctgc
aagcccaagcgtttcgcccacctgcaccagcacacgcagtacagcctgctcgacggcgcc
gccaagctcaaggacctgctgaagtgggccaaggaggtcacgcccgagggccagaccccg
gcgctggcgatgaccgaccacggcaacatgcacggcgcggtgcacttctacaactacgcg
accggcatgggcgtcaagccgatcatcgggtacgaggcctacgtggtgccgggccagggc
acccgccgcgaccgcacgcgcgggcaggacggcgagaagggcatctttcacctgacgctg
ctggcccgcgacttcgagggctaccagaacctgtgccgcctgagcagccggggctacacc
gaggggtattactacaagccgcgcatcgaccacgaactgcttcaggagcaccacaagggc
gtgatcgccttctcgggctgcctggggagcgaggtgcagcaactcctgatgcaggggcgc
gaggccgacgccaaggcgcggctgctgtggtaccgcgacctgttcggcgagaactactac
atcgagattcaggaccacggcctgcccgagcagcgcaagaacaaccccatcctgaaggcc
tgggcgcaggaactcggcatcgggatggtggcgacgaacgacggccattacgtcaagaag
tcggacgcgaccgcgcacgagacgctgctcgccatccagaccaaggccacgctggccgac
gagaaccgcttcaagtttccctgcgacgagttctacgtcaaggacctggaggagatgcag
gcggccttgccggtggccgaatggggcgaggaagtcttcgacaacacggccatgatcgcc
gacctgtgcaacgtcgagctgccggtgggcaagaaacgcgtgtaccagatgcccgccctg
cccatccccgagggccgcaccatgcccgaggaactgcgcgtgcagacctaccggggtatg
gtcaagcgctacccggcgcacgccaccgaagggctgctgcgcgactacgctgcccgctcg
ctggcggaactgggcgcagacgacgccgcgcgggtactggcgcgggtgccgggctgcgac
gccgcgagctgcgacctggagacgttgctgaccctgctggccttcctgggcagcgagtgg
gaggcgcggggcaaggcggcgggcgagaagtacacgccctacccggcgctggtgaagatg
gaagaggaagccgtgagcggcatcctgcccccctacgcctacgaggactgccgccgcgcg
cagggcagggacagcgacacgagcatcgagctggacccggacgccgacgagggcgagacc
acgcgcggccaccaccgccacgccctgaccatcctgcgccgggccgagtacgagctgtcg
gtcatcaacaacatgggctttcccgactacttcctgatcgtggccgactacatcaactgg
gccaaggaccacgacatcagcgtggggccgggacgcggctcgggcgcaggcagcctcgtg
gcctacgcgatgcggatcaccaacctcgacccgctggagttcgagctgctgttcgagcgc
ttcctgaaccccgaccgcatctcgatgcccgacttcgatatcgacttcaacgatgcccgg
cgcatggaggtcatcgagtacgtgcgcggcaagtacggcgacgacaaggtcgccatgatc
gccaccttcgggacgatggcgagcaaggcgtgcctgaaagacgtggcgcgcgtgatgggt
ctggaatacgccaaggtggacaaggtctccaagctcatccccatcaagttcggcaagagc
tacagcctggagcaggcgcgcgagtcggtcccggacatcgcgcagatgctgaacgaggat
gcgcagctcctcgaagcctacgagttcgcgcagaaactcgaagggctgacgcgccacgcc
tcggtgcacgcggcgggggtggtgatcgggcgcgaccagctcaccgacctcgtgccggtc
atgcgcgacacctcgggcgagggcatggtctgccagtacgacatgaaggccgtcgaggac
atcggcctgatcaagatggacttcctgggcctgcgcaccctgtccttcctcgacgaagcg
cggcgaatcatgcgcgagtcgcagaagatcgacatcgacttcgacgcgattcccttcgac
gacgagaagacctacgccctcatgagccggggcgacaccaagggcgtgttccagctcgaa
ggcgcgggcatcgcggacgcctcgcgccgcctcaagccccggcgtctggccgacatcatc
gcgctctcggcgctgtaccgccccggcccgatggagaacatcccgacctacgtgcgccgc
caccacggcgtcgaggacgtggattacgtgcgcgacggcttcccgacctcggcgcagtac
ctcgaaaagatcctggccgaaacctacggcatccccgtgtaccaggagcagatcatgcag
atcgcctccgaggtcgcgggcttctcgctgggtggggcggatctgctgcgccgcgcgatg
ggcaagaaggacgtggccgagatggcgaagcagcgcgacctgttcgtcgagggcgcgaag
ggcaatgaggtgccgaaggaagaggccaacaagctcttcgacctgctggacgccttcgcg
aactacggcttcaacaagtcgcactcggcggcctacggggtcatcacctaccagaccgcg
tggctcaaggccaactacccggtcgagttcatggccgccctcttgaccgtcgagcgccgc
gactcggacaaggtggccgagtacgtcagcgacgcccgcaagatggacgtgcgggtgctc
tcgccggacatcaaccggtcgagcagcgactttgccgtgcagggcgaggaaatcctcttc
gggctgtacgccatcaaggggctgggcgaggcggcggtgcagaagattctggaggagcgc
gagcgcggcggggcctacgccagcctctcggacttctgctcgcgcctgggcaacaaggtg
tgcaaccgcaaggccctggaaagcctgatcaagtcgggggccttcgacgccttcggggag
cggcgccaactgctggagtcggtggacgacgcgctggaagacgccgccgggaccgccgag
atcaacgcgaaagcccagagcggcatgagcatgatgttcggtttcgaggaagtgaaaaag
gagcgcccgctgcgcagcggcgtgacccccctgaccgacctggagcgcctgaagatcgag
aaggacgcgctgggcctgtacatctccgggcacccgctggagcagcacgaaggtctgcgc
gaggcggccagctgccgcatcagcgacctcgacgcgtggttcaccacccagagcgtcgcg
cccggcaaacgcatcaaggcggtgctggcgggcatgatcgagggcgtggtcaagaagccc
accaagtcgggcggcatgatggcccggttcatcctggccgacgagtcggggcagaccgaa
ctcgtggccttcagccgcgcctacgaccgcattcaggacaagctggtgaacgacacgccc
gccctggtgatcgtggaactggagtccgaggacggtggcctgcgggcgattgccgaggag
gtcgtgggcatcgagcagctggccgaggtgcccaaggtcatgtacgtgacgatcgacctg
gagacggccagcccggacgccgtgggcgaattccagagcgtgctggacgagcacgcgggc
agcatgcccacctacctgcggctggagacgcccgagcagttcgtgctgtaccagctcgac
cacggtatgggcagcccggaggcgatccgggtgctgaacacgacctttgcctgggcctcg
gcgtacctggcctacgatcagcagacgattctgggccggttcgcgcccaaaccgcccgcg
tggatgaaccggcagaacgggaacggcgggggaatgcgggcgtga
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integrated database retrieval system
