Deinococcus gobiensis: DGo_PB0093
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Entry
DGo_PB0093 CDS
T01827
Symbol
topA3
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dgo
Deinococcus gobiensis
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgo03032
]
DGo_PB0093 (topA3)
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_PB0093 (topA3)
Enzymes [BR:
dgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DGo_PB0093 (topA3)
DNA replication proteins [BR:
dgo03032
]
Prokaryotic type
DNA Topoisomerases
DGo_PB0093 (topA3)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DGo_PB0093 (topA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AFD27362
UniProt:
H8H1G5
LinkDB
All DBs
Position
P2:69395..71449
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AA seq
684 aa
AA seq
DB search
MPLLIVESPKKAKQIASYLGRDWTVKACFGHVRDLPAKKEEIPVKYRAQAWARLGVDVEG
GYTPIYVERAKANVLAELRAAVKAAKGDVYLASDPDREGESIAWHLSVVLGLKDARRVTY
QEVTKAAIQKALQSPRPINLALVAAQESRRILDRLAGYGVSPLLWDAIGGPQSAGRVQSA
ALMLLAQREQARMRFVPAGYWRVAAQVGTTPPFQATVQAIRGLPLATAASFTPQGQLKEG
LEVAQLDAQKAEGLRGYLEGREAEVTGIEVSPVVRRPPPPFTTSSLQQAAGARLRFSVET
TSRAAQSLYEQGLITYIRTDSPALSDEALELARVAVQERFGQGALPPAPRQYATRNANAQ
EAHEAIRPAGDFKAPKATGLSGDELALYTLIYTRTVASQMQDALGEKTTVRLQAGVVTLG
ATGTRLTQRGFTALYEDEAEDADDQALPALTVGQRVGLSGVKVEEKKSSAPPRYGEGAFV
QLMEKAGIGRPSTYASTLKTLQGRSYVAVRGRKLHVTPLGLCVAMYLMQQLPQLVDARFT
AEMERELDTIAQGALKRTVYLDRVWREALQPAIARAQRTSPRLRVPGQEAVFEVQGGQVS
LRTAQGVVTLPPELLPEDLNEQSIAALLAGTWKVGRGVRAERVPASSDVDKPARAPRRKK
GEAGTTKAPRKSRQAGGSRKGKRL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctgatcgtcgaatctccgaagaaggcgaagcagatcgcctcgtacctgggc
cgggactggacggtgaaggcctgcttcgggcacgtgcgggatctgccggcgaagaaggag
gagatcccggtgaagtaccgcgctcaggcctgggcgcgcctgggggtggacgtcgagggc
gggtacacgccgatctacgtggagcgggccaaagcgaacgtcctcgccgagctgcgcgcc
gcggtgaaggccgccaagggagacgtgtacctggcctcggacccagaccgggaaggggag
agcatcgcgtggcacctgagcgtggtgttgggcctgaaggacgcgcgacgggtgacgtac
caagaagtgacgaaggccgccatccagaaggccttgcagagtccccggccgatcaatctg
gcgctcgtggctgcgcaggagagccggcgcatcctggaccgtctggcgggctacggggtg
tctccgttgctctgggacgccatcgggggaccacagtcggcggggcgggtgcagtcggcc
gccctgatgctgctggcgcagcgcgagcaggcccggatgcgcttcgtcccggccgggtac
tggcgggtggccgcccaggtggggaccacgcccccttttcaggccacagtgcaggccatc
cgaggtctgccgctggcgacggccgcgagcttcacaccccaggggcagcttaaggagggc
ctggaagtggcccagctggacgcccagaaggccgagggcctgcgcgggtacctggaaggc
cgggaggcggaggtcacgggcatcgaggtcagtccggtggttcggcggccgccaccgccc
ttcacgacgtcgagtctccagcaggcggcgggggctcggctgcgcttcagcgtggagacg
acctcgcgggccgcccagtcgctctatgagcaggggttgatcacgtacatccgtaccgac
agtccggccctctccgacgaggcgctggagctggcgcgcgtggcggtgcaggagcgcttc
ggacagggggcactgccgcctgcccctcgccagtacgcgacccgcaatgcaaatgcccag
gaggcgcacgaggccatccggcctgcgggggacttcaaggccccgaaggcgactgggctg
agtggggacgagctggcgctgtacaccctgatctacacgcggaccgtggcgagtcagatg
caggacgcgctgggggagaagacgaccgtgcgcctgcaggcaggcgtggtgacgctgggg
gcaactggaacccggctgacgcagcggggcttcacggcgctgtacgaggacgaggcggag
gacgctgacgaccaggcgctgccggccctgactgtcgggcagcgggtggggttgagcggc
gtgaaggtggaggagaagaagagcagcgcgccgccccggtatggggagggggcgttcgtg
cagctgatggagaaggccgggatcgggcggccgagcacgtacgcgagcacgctgaagacg
ttacagggccggagttacgtggcggtgcgggggcggaagctgcatgtgacgccgttgggc
ttgtgtgtggcgatgtacctgatgcagcagctgccgcagctggtcgacgcgcggttcacg
gcggagatggagcgggagctggacacgattgcacagggggcgttgaagcggacggtgtat
ctggaccgggtgtggcgggaggcgttgcagccggcgattgcacgggcacagcggacgtcg
ccgagactacgggtgccagggcaggaggcggtgttcgaggtgcagggggggcaggtgagc
ttgcggacggcccaaggggtcgtgacgttgcctcctgagctgctgccggaggatctgaat
gaacagagcattgcggcgttgttggcggggacgtggaaggtggggagaggagtgcgggcg
gagagagtgccagcgtcctctgatgtggataagcctgcacgagcgcctcggcggaagaag
ggggaggcggggacgaccaaggctccacggaagtcgaggcaggctgggggttcccggaag
gggaagcgtttgtag
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