Deinococcus gobiensis: DGo_PB0157
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Entry
DGo_PB0157 CDS
T01827
Name
(GenBank) Helicase RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DGo_PB0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_PB0157
Enzymes [BR:
dgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DGo_PB0157
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DGo_PB0157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
HHH_RecD2
SH3_13
AAA_22
AAA_16
AAA_5
UvrD-helicase
PIF1
nSTAND3
AAA_28
T2SSE
Pif1_2B_dom
TrwB_AAD_bind
NTPase_1
AAA
SLFN-g3_helicase
NAT10_TcmA_helicase
HerA_C
NPHP3_N
MeaB
nSTAND_NTPase5
UvrD_C
AAA_18
DEAD
AAA_7
Zeta_toxin
AAA_14
ABC_tran
KTI12
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AFD27426
UniProt:
H8H1M9
LinkDB
All DBs
Position
P2:116261..118222
Genome browser
AA seq
653 aa
AA seq
DB search
MTAPPLIGRVQRHWRTQAGLDGCILLVNEIEHRLTAPRGLPPVLKGAQLQVTVEAGEIVT
AERLVTETEIAWAFYSRLPGPAARNVIKVVHALGDQTHELVQGPHGLLSGISGCTPSLLK
AMRDYARKEGRLYTTLRALADLGLPPEHARRLVKVHGAGAVRRFEEDPYAGVQYGIALSV
LDYAARQQGLSLFDPRRGPALAYEIVRLACQEHGHTCLPLPVLYGELRDLHALEDDEATD
AVARAFQAGSLKEALGAAYLPDQLRLESRLADDVIRLVLSTPTPVRPLLPPHLTDEQGAA
VTLGCQSTLCIITGGPGTGKTTTLKALLDSLEAAGLETLLCAPTGKAASRMSQSTEREAT
TLHRILGYDGAAYTGGSIQADVVVVDEVSMASNELLSQLLRVVPDATRVILVGDEDQLPP
IDAGHPLAALIQTLPTARLTKTHRQAQGSPILKLAGMLISGEAPVNTGVPFHAAEVTHQI
VDLVQAHLTPQGPPMVLTAGKAGPLGVDALNLALQAALNPGTGRLRVGDPVMATRNNHET
GLMNGMTGRVTEIGKKLRCLFDDVPYEFSAEEAAQLALAYAMTIHRSQGSEWPAVIVVLA
AAHQRLLSRQLAYTAVTRAKSVLVASGERAAWTYCAQTNAPYRNSMLERFLRL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgcctttgattggccgtgtccagcggcattggcgcacccaggcaggcctc
gacgggtgcatccttctcgtgaacgaaatcgagcaccgcctcactgccccccgtggcctg
cccccagtgctcaagggcgcgcagctccaggtcacggtcgaggcaggcgagatcgtgacg
gccgagcgtcttgtcacggagacagagattgcctgggccttctactcccgcctgccgggc
ccggccgcgcgcaacgtgatcaaggtggtgcacgccctgggcgaccagacgcacgagttg
gtacaggggccacatggcctcctcagtggaatctccggctgcaccccctccctcctcaaa
gccatgcgggactatgcccgcaaggaaggccgcctctacaccaccctgcgcgccctggcc
gacctgggcctgccgcccgagcacgcccgcaggctggtcaaggtccacggtgccggagcc
gtgcggcgcttcgaggaggacccctatgccggcgtgcagtacggcatcgccctgagcgtg
ctcgactatgccgcccggcagcagggcctgagtctgttcgaccctcgccgaggcccagcg
ctggcctacgagatcgtgcgcctcgcctgtcaggaacacgggcatacctgcctgcccttg
cctgtcctctacggtgagctccgggacctgcatgccctggaggatgacgaggccaccgat
gccgtcgcccgcgccttccaggccgggtccctgaaagaagccctgggggccgcctacctt
ccggatcagttgcgcctggaatcccgtctcgccgatgacgtcatccgcctggtcctcagc
acgcctacgcccgtcaggcccctcctgcccccacacctcaccgacgaacagggcgcggcc
gtcacgctggggtgccagtccaccctgtgcatcatcacgggcgggcccgggacggggaaa
accacaaccctcaaggccttgctcgacagcttggaagccgccggcctggagaccctccta
tgcgcgcccacggggaaggccgcgagccggatgagccagagcaccgagcgcgaggccacc
accctccaccgcatcctgggctacgacggggccgcctacacgggcgggtcgatccaggca
gatgtcgtcgtcgtggatgaagtcagcatggcgagcaacgaactcctgagccagctgctc
cgggtggtgccggatgcgacccgcgtgatcctggtcggcgacgaggatcagttaccacct
atcgacgccgggcaccccctggctgctctcatccagacgttgccgacagcccgcctcacg
aagacgcaccggcaggcgcagggcagtcccatcctgaagctcgcgggcatgctcatcagc
ggggaagcgccggtcaatacgggtgtgcccttccacgcggccgaggtgacccatcagatc
gtggacctcgtgcaggcccacctgacgccccagggcccccccatggtcctgacggctggg
aaagccgggccgctgggggtcgatgcgctgaatctggccctgcaggcggccctcaatcca
gggacgggccgcctgcgggtgggtgacccggtcatggccacccggaacaatcacgagacc
ggcctgatgaacgggatgaccggtcgggtgacggagatcgggaagaagctgcggtgcctg
ttcgacgacgtgccctatgagttctccgcggaggaggccgcgcagctggccctggcctac
gccatgacgatccaccgttcccagggcagtgagtggccggccgtgatcgtggtcctggct
gccgcacaccaacgcctcctgtccagacagctcgcctacacggccgtcacccgcgcgaag
tcggtcctcgtggcctccggcgagcgggccgcctggacgtactgcgcccagacaaacgcg
ccctaccgaaattccatgctggagcgctttctccgcctctga
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