Drosophila grimshawi: 116805250
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Entry
116805250 CDS
T01061
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dgr
Drosophila grimshawi
Pathway
dgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116805250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
116805250
03019 Messenger RNA biogenesis [BR:
dgr03019
]
116805250
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116805250
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116805250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
Nab2-like_zf-CCCH_
zf-CCCH_RBM22
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
116805250
NCBI-ProteinID:
XP_032591967
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MPKKTSQTTRFIYIFIVNAKSARHEMELLLANVNSLQFKAERDLIEQVGAIPLPFYGMDK
SIAAVCNFITKSGQECDKGSACPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKM
PECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMNYLA
GFCPDGPNCKHMHPRFELPPLADLSKDQLHKKLPTCHYCGELGHKANSCKQYVGSMEHRN
NINAMDHSGDNNDDGGGGGGGVGGIVPNHPPPAFIKVPTPLEEITCYKCGHKGHYANKCP
KGHLAFLSNQHSHK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaaacatcccaaacaacgcgcttcatttatatttttattgttaatgcgaaa
agtgcccgacacgagatggagctacttttggccaatgtgaacagcctgcagttcaaggcg
gaacgcgacctgatcgagcaggtgggcgccattccgctgccgttctatggcatggacaaa
tccatcgctgccgtctgcaatttcattacaaagagtggccaggaatgcgacaagggaagc
gcctgtccctttcgacatatacgcggagatcgcaccatcgtctgcaagcactggctgcgc
ggcctgtgcaagaagggggatcagtgcgagtttctgcacgaatacgatatgaccaagatg
ccggaatgctatttctactcccggttcaatgcctgccacaacaaggagtgcccattcctg
cacatcgatccgcagagcaaggtgaaggactgtccgtggtataaacgtggattctgtcgc
cacggcccccactgccggcatcagcatctgcgacgtgtcctctgcatgaactacctggcc
ggcttctgtccggatggccctaattgtaagcatatgcatccccgatttgagctgccgcca
cttgctgatctcagcaaggatcagttgcacaagaaactgcccacctgccattactgtggc
gaattgggacacaaggcgaactcgtgcaaacaatacgtgggcagcatggagcatcgcaat
aatatcaacgccatggatcacagtggcgacaataatgatgacggtggtggtggtggcggt
ggtgttggtggcattgttcctaatcatccgccaccggcgtttataaaagtgccaacgccg
ctggaggagatcacctgctacaagtgtggacacaagggacactatgctaacaagtgcccc
aagggccatttggccttcctatcaaatcaacatagtcataaatag
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integrated database retrieval system
