Drosophila grimshawi: 6556963
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Entry
6556963 CDS
T01061
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
dgr
Drosophila grimshawi
Pathway
dgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6556963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6556963
03041 Spliceosome [BR:
dgr03041
]
6556963
03036 Chromosome and associated proteins [BR:
dgr03036
]
6556963
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
6556963
Spliceosome [BR:
dgr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
6556963
Complex B
6556963
Complex C
U2 SnRNP specific factors
6556963
Chromosome and associated proteins [BR:
dgr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
6556963
TFTC complex
6556963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
DUF8828
Motif
Other DBs
NCBI-GeneID:
6556963
NCBI-ProteinID:
XP_001983703
UniProt:
B4J2R0
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG
CIRALMAFRLTGGTKDYIVIGSDSGRIVILEYIPSKNSLEKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADLANEDT
PQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQ
RSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNASGADED
VPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSE
AVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKL
GAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNERKEQMAEEMRSAAGDE
ERDLAREMANAFINEVLPEDMFSAPKAGLGLWASQIRCLDAMHGQTMFSVPLAQNEAIMA
MAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDVYKIDPTCSALEFLHRTEIEEIP
GALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESV
FFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDED
PTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLSGTVGAF
VPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSVDASK
QKSIAGDMFRTPNQICKKLEDIRTRYAF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtacttgtataatttgacgctccaaaagggcaccggcgtcacgcacgccgtgcacggc
aacttctcgggcggcaagcagcaggaggtgctcttgtcacgtggcaagtcgctggaattg
ctgcgacccgatcccaacaccggcaaagtccacacgctgatgtcaacggaaatatttggc
tgcattcgagcgctgatggcctttcgcttaactggcggcacaaaagattacattgtgatt
ggctctgattctggtcgcattgtcattctggagtacattcccagcaagaattcgctggag
aaagtgcatcaggagacatttggaaagtcaggctgtcgtcgcattgtgccgggccaatac
tttgccatcgatcccaagggacgtgccgtgatgattggtgccgttgagaaacaaaagttg
gcctacatcatgaatcgtgacacacaggcgcgtctaaccatatcctcgcccctggaggca
cacaaatccaacacgctgacttatcacatggttggcgtggatgttggctttgataatccc
atgtttgcgtgtctggaaatcgactatgaggaggccgacttggatccatcaggtgacgcc
gcacagcgcacacagcaaacgctaacattttacgagcttgacttaggcttgaatcatgtg
gtgcggaaatactctgaaccactggaggagcatgccaattttttggtatctgtgcccggc
ggcaatgacggaccctcgggtgtgctcatctgctcggagaattatctgacgtacaagaat
ctgggcgatcagcatgacattcgctgtcccattccgcgtcgtcgtaatgatctcgatgat
ccggaacgtggcatgatctttatatgctcggccacacatcgcaccaagagcatgtatttc
tttctgctgcaaaccgagcagggcgacattttcaaaatcaccctcgagacagatgacgat
gtggtgtctgagatcaagctcaagtactttgacacggtaccgccagcaacggcaatgtgt
gtgctgaagacgggtttcttgtttgtggccagcgaatttggcaaccattatctgtatcag
attgcacatctgggtgatgacgatgatgagcccgaattcagctctgccatgccattggag
gagggtgaaactttcttcttcgctccacgtgcattgaagaatctcgttctggtcgatgag
ttgccctcgtttgcgccaatcatcacctcacaggtggctgatttggccaacgaagataca
ccgcagctgtatgtgctctgcgggcgtggtccacgctcaactttgcgcgttttgcgtcac
ggtctcgaggtatccgagatggctgtctcggagctacccggtaatccaaatgccgtgtgg
actgtcaaaaaacgcatagatgacgagtttgatgcctatatcatcgtatccttcgtgaat
gccacgctcgtgctcagcattggtgagaccgtcgaggaagtgacggacagcgggtttctg
ggcacaacgccaacattgtgttgtgctgctctcggtgacgatgctctagtgcaggtttat
cccgatggcattcgtcacatacgctccgataagcgtgtgaacgagtggaaagcgcccggc
aagaagtccattaccaaatgcgccgtcaatcaacgccaggtggtcattacgctctccggt
cgtgaattggtctactttgaaatggatccgactggcgagctaaacgagtacacagaacgc
tcggagatgccggcagagatcatgtgcatggctctgggcactgtgcctgagggcgagcag
cgttcctggttcttggctgttggcctcgctgacaacactgtgcgcatactctcgttggat
ccgaacaactgtttgtcgccttgctccatgcaggcgctgccctcgccagccgagtcgctg
tgtttggtcgagatggggcacacggagagcaccacaaacgcaagcggtgcggatgaggat
gtacctgcccagcgcagtggcagcaataagggtacaatctatctgaacattggcttgagc
aacggtgtcttgttgcgcactgtgctggatcccgtgtctggagatttggccgatacgcgc
accagatatttgggctcgcgaccagtgaagctatttcgcattaagatgcagggctccgaa
gccgtcttggcaatgtccagtcgcacttggctgtcgtattaccatcagaatcgtttccat
ttaaccccactgtcgtatgagacactggagtacgcctcaggcttctccagcgagcagtgt
agcgagggcattgtggccatatcgacgaatacgctgcgcattctggcgctggaaaaactg
ggcgcagtcttcaatcaggtggcatttccactgcagtttacgccacgcgcctttgtcatc
catccggatacaggacgcatgctaattgcggagacggatcacaatgcctacaccgaggag
actaagaacgagcgtaaggagcaaatggccgaagaaatgcgcagcgctgccggcgacgag
gagcgtgacttggccagagagatggcgaacgcgttcatcaatgaagtgctgcccgaggat
atgttctccgctcccaaggcgggactcggtctgtgggcttcgcagatccgttgcctggac
gccatgcatggccagacgatgttcagtgtgccgctggcacagaacgaggccatcatggcc
atggcgatgctgaagttttcaattgcggccgatggacgttactatctggccgtgggcatt
gccaaagatctgcagctgaatccacgcatctcgcagggcggttgtattgatgtctataaa
attgatccgacctgctcggctctggagtttctgcatcgcacggagattgaggaaatacct
ggcgccttgtgtggcttccagggacgcttgctggctggttgtggccgcatgctgcgcatc
tatgatctgggcaagaagaagatgctgcgcaagtgcgagaacaaacacattccctaccaa
attgtcaacatccaggcgatgggtcatcgcgtctacgtctccgatgtgcaggagtctgtc
ttctttatacgctatcgtcgcgccgagaatcagctcattatattcgcggatgatacgcat
ccacgttgggtgactgcgacaacgctcttggattacgatacgattgccattgcggataag
tttggcaatctgagcattcaacgactgccgcattcggtcactgacgatgtggacgaggat
ccaactggcaccaagtcgctctgggatcgtggtttgttgtcgggcgcctcacagaaatcg
gagaacatctgctcgttccatgtgggcgagataatcatgtcgctgcagaaggccaccctc
attcctggtggctcagaggccctaatctattccacgctgagtggcacggttggcgccttt
gtgccgttcaccagtcgcgaggactatgacttcttccagcatctggagatgcatatgcgc
aacgagaatccgccgttgtgtggtcgggaccatctcagctaccgcagctcctactacccg
gtgaagaatgttctcgatggtgatctgtgcgaacagtatttatcggttgatgcatccaag
cagaagagcattgcgggcgacatgtttcgcactccgaatcagatctgcaagaaactggag
gacattcgcacccgctatgcgttctaa
DBGET
integrated database retrieval system
