Drosophila grimshawi: 6557027
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Entry
6557027 CDS
T01061
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dgr
Drosophila grimshawi
Pathway
dgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
6557027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgr03400
]
6557027
DNA repair and recombination proteins [BR:
dgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
6557027
BRITE hierarchy
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Ortholog
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Other DBs
NCBI-GeneID:
6557027
NCBI-ProteinID:
XP_001985388
UniProt:
B4IZG1
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Position
Unknown
AA seq
1201 aa
AA seq
DB search
MSKKLNTSAGGTPKNTLFNYFTKSPVVDKNKLTPNRANESQKENQRNGNGKDGQKESKPA
AKRKLSISPSTAANGVDSEEEEEIGKLKRKRIILPESESEEEEYESKSEEDFSDDGSEFE
PDDSKEAAVSEESDSGDDEVESSEPESEESPTPKKRRTKSAKNHNNNNNNNNNNEPLSKK
TKMDTTVLAAGGTFMEKLQQLQSNAKKDAAYDEIVTTTSTNLDEPVLWPHQKLEFLQPDK
IKDKAGRRPDHPEYDKSTLHVPEKFLNSLSPGVRQWWILKSDNYDCVLFFKVGKFYELYH
SDADVGVKELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETPDMMTERCK
LIKPTKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGTWSKYGICFI
DTSIGDFHVGEFDDDKSCSRLLTLLSHHMPVLLLHEKSALSARTQQILRTVLGGILKEQM
PATGTQLCSAEKTLKLLAERYYAGGGPAENNWPLVLRSMQSDTDHLGLTPADHYKLALKA
LGQCIHYIAKCKLEPKVLPMARYQLYVPPDQLQLENIPAALASTLRRSHMVLDATTLSNL
RIVGEEHSLLSTLDNCCTKFGKRLLHHWLCAPSCDLTVLRERQQAIGELLSKPDELQQLR
ALLAPMPDFERHLAQIHLFGNKRVAQADHPDSRAIFFEEKLYNKQKLRSFMSILKGFGAL
TQLPLMFKDCETSLLQRLTQLPTDGGSFPDLSKQLKFFQHAFDHEAADKTGVVAPQPGVD
SDYDEVQQGIADVEQRLKTYLTEQERHFGCRVIYFGSDKKRYQLEVPETHAHKVNKSYAL
EGQVRGKKPARRYTTAETKALLKDMQQAEEVRNAVLKDLARRLFEKFSNHYEQWKQCIDC
VAMLDVLAALAEYARQQLVICVPELVSAQTQPFIELEEGYHPCVNPSTYIPNGLQLGTES
EAPLSLLTGPNMGGKSTLMRQLGLLTIMAQIGAHIPAAACRMSLVDRIFTRLGAQDDILA
GHSTFLVELNETSLILKHATSNSLVLLDELGRGTATYDGTAIAASVVNFLASLKCRTLFS
THYHNLIDFFHMDKRVTLGHMACMVENEDNTDPTQETVTFLYKYTAGACPKSYGFNAAKL
AGMSHGIIKRAYELSKKVEAIALQRKITAKVVAASVGEPKSKQDKLNNLKDLLQQLKMCH
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaattgaatactagtgctggcggcactcccaagaacactttgttcaattac
tttaccaagtcgccagtagttgacaaaaacaaacttacaccgaacagagcgaacgagtcg
caaaaggaaaatcaacggaatggaaatgggaaggatgggcaaaaggaatcgaagccagct
gccaagcgcaagttgtcaatttcacccagcacagctgctaatggggtagacagtgaggag
gaggaggagattgggaaacttaagcgtaagcgcattattttgcccgaatcggagagcgaa
gaggaggaatatgaatccaaatcggaggaggacttttcggatgatgggtccgagtttgag
ccagatgatagcaaggaggctgctgtcagtgaggagagcgacagtggcgatgatgaagtc
gagtcaagtgaacccgaatcagaggagagtcccacgcccaagaagcgtcgaacgaagtcc
gccaaaaaccacaacaataacaacaacaacaataataacaatgagcctcttagcaagaaa
accaaaatggatacaactgtcttggctgcaggtggcacattcatggagaagctgcagcag
ctgcagagcaatgccaaaaaggatgccgcctacgatgagattgtgaccacaacatcgaca
aatctggatgagcctgttctgtggccacatcagaaactggaattccttcagcctgacaag
attaaggataaggctggcagacgacccgatcatcccgaatacgataagagcacactgcat
gtgccagagaagtttctgaattcgctgtcgccgggcgtgcgtcagtggtggatcctcaag
tcggacaactacgattgtgtgctcttcttcaaggtgggcaagttctatgagttgtatcac
agcgatgccgatgtgggtgtcaaagagctgggtttcacctacatgcgcggcgaattcgct
cactccggcttcccagagatctccttcgacaagatgtccaccatattgatagacagggga
tataaggtggctcgcgtggagcaaactgagacgccggacatgatgacggagcgctgcaaa
ctgatcaagccaacgaaattcgataaggttgttgcccgtgagatctgccagattacggat
aggggcacgcaagtgtttggatctcagtgcgccattgggcccaatcatcagcccaattat
atgctggccatagtcgagcaggatgagggcacctggagcaaatatggcatctgttttata
gacacctccattggtgacttccatgtgggcgaattcgatgatgacaaaagctgctctcgc
ctgttgacgctgctctcgcatcacatgcccgtcctgttacttcatgagaaatcagcactc
agtgcgcgcacccaacaaattctgcgcacagtgctaggcggcattctcaaggagcagatg
ccagccactggaacacagctttgcagcgctgagaagacactcaagttgcttgcggaacgc
tactatgctggcggtgggccggccgagaacaactggccgctggtgttgcgcagcatgcaa
tcggatacggatcacttgggccttacgcccgccgatcactacaagctggcactcaaggcg
ctcggtcagtgtattcactacatagccaagtgtaagctggagcccaaggtgttgccaatg
gcacgttatcagttgtatgtgccgcccgatcagctgcagctggaaaatatcccagcagcg
ctggcttctacgttgcgccgttcacacatggtgctggatgcgaccacattgtccaatttg
cgcattgttggcgaggagcattcgttgctgtcaacgctggataattgctgcaccaagttt
ggcaaacgactgctgcatcattggctctgtgcgcccagctgcgatttaactgttcttcgc
gagcggcagcaggcgattggtgagcttctcagcaagcccgatgagctgcagcagctgcga
gctttgctggcgcccatgccggattttgagcggcatttggctcagattcatctgtttggc
aacaagcgtgtggcccaagcagatcatccggattcaagggccattttcttcgaagagaag
ctgtacaacaaacagaagctgcgcagtttcatgagcatactcaagggatttggagcattg
actcaattgccgcttatgtttaaggactgtgaaacatcgctcttgcaacgcttgacgcag
ttgccaaccgatggaggcagttttcccgatctcagcaagcagctgaagttctttcagcat
gccttcgatcatgaggcagctgacaaaacaggcgtcgttgcacctcagcctggcgttgac
tctgactacgatgaggtgcagcagggcattgctgacgttgagcaacggctgaagacttat
ctaacggagcaggagcgtcactttggttgtcgtgtcatttactttggctcggacaagaaa
cgctatcagctggaggtgcctgagacgcatgcgcacaaagtgaacaagtcatatgcgctt
gaggggcaggtgaggggcaagaagcccgcacgtcgctacaccacagcggagacaaaggcg
ctgctgaaggacatgcagcaggcggaggaggtgcgtaatgcagtgctcaaggatttggct
cgtcgcctctttgagaagttctctaatcactatgagcaatggaagcagtgcatcgattgt
gtggccatgctggatgtgctcgccgccctggcggagtatgcacgccagcagttggtcatc
tgtgtgcccgagctggtctcggcacagacacaacccttcattgagctggaggagggctat
catccgtgtgtgaatccatcaacttacataccaaatgggctgcaactgggcactgaatcg
gaggcacccctctccttgctaactggcccaaatatgggcggcaagagcacgctgatgcgc
cagctgggtttgctgactatcatggcacaaataggtgctcacatacctgctgccgcttgc
cgcatgtcgcttgtggatcgcatttttacgcggcttggggcgcaggatgatatactagcc
ggtcacagcaccttcttggtggagctaaatgaaacgtcgctcatattgaagcatgccacg
tcgaattcgctggtgctactcgatgagcttggacgtggcacggccacttacgatggcacg
gctattgcagcatctgtagtcaactttttggcgagcttgaaatgccggactttgttctcc
acgcattaccacaatctgattgatttctttcacatggataagagggtcacgctgggtcat
atggcatgcatggttgagaatgaggacaacacagatcccacacaggagacggtcaccttc
ctatacaaatacacagcgggtgcatgccccaagtcgtacggcttcaatgcagctaaattg
gctggcatgtcccacggcattatcaaacgtgcctacgagctatctaagaaagtggaggcc
attgctctgcaacgcaaaataactgccaaagttgtggcagcatcggtgggagaaccgaag
tcaaagcaagacaagttaaataacttaaaggatttattgcagcagctgaaaatgtgccat
gtttga
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