Drosophila grimshawi: 6557309
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Entry
6557309 CDS
T01061
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dgr
Drosophila grimshawi
Pathway
dgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6557309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6557309
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6557309
mRNA degradation factors
3'-5' decay
Pan complex
6557309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6557309
NCBI-ProteinID:
XP_001983282
UniProt:
B4IZP5
LinkDB
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Position
Unknown
AA seq
854 aa
AA seq
DB search
MSTFLNNFFPADTAAMDPIFFSPSNGIPSESKLATYMNVATATGYGLNTASVNVNLNINV
NASSNSSNNSNGNSNCTTNSSSNSNSNGFALLNLDSSSSTSLAVNKKTQVTPQSPEFIPT
NFYTPYHVNNGLNGVNGLTAAAAAAVATASATATAAATASPVSTSSSVTSAVSISKTVNG
SNSSAAVASSMMLSMQQQKTTATVATVSIAQQQQKQQQQQQQTEQSVTSATSVTSSSLSS
SSSSASSAPIAIIGAPPNPAAAPFVSSMSAQTPLKARNAMLRQQQQQQQQDSPATTAAAM
IGGEKSPPHGMTPHGASPIPTTLPASVHQENVGGTIYFYPTANAPNNQPVVNSVVVDSTH
PSHPAHHGVVSAVAPLNAVVPSQLLYAGHVYPGPASNVIAMQPKTQLESAFFMPDEMRSD
ILARNEISNLIMDAAEAAQHALPLEVDNYHALYPLEAPAQAMHTKLTLPASTYRATHNST
GFKYCLRRLHGFRLQSTKCMTLVEMWKKLQHTNVVQLREVFTTKAFGDNSLVLVYDYYPG
SQTLLAKYFTPAPETNGYTDPFQGDARPFSHKSNMQRTNNGPLLPESTIWSIIMQLTAGL
RAIHQAGLACKILDPTKIIVTGKRVRFSSCCISDITQFDPNAANPLALVNMHQQDDLTAL
GRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLFTTNNRRSVTDLMPMIGA
RFYTQLDALQAQVDMQEDELAKEMENGRLYRTLVKLNSINERPDFNLDCTWSETGDRYML
KLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSYAELKNC
LENAFSELMSTAAN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttcttgaacaatttcttcccggcagatacggctgctatggatccaattttc
ttttcaccttcaaatggtataccgtctgagagtaaactcgccacttatatgaatgttgcc
acagcgacgggctatgggctgaatactgctagtgttaatgttaaccttaacattaatgtt
aatgctagcagtaacagtagcaataatagtaacggtaacagtaactgtacaactaacagt
agcagtaacagtaacagtaatgggttcgcactacttaacttggactcttcctcttctacg
tctctagctgttaataaaaagactcaggtaacgccacaatcgcccgaattcattccaacc
aatttttatacaccatatcacgtgaataatggcctaaacggcgttaatgggttaactgct
gctgcagccgccgccgttgccacagcatcagcaacggcaacagcagcagcaaccgcgtcg
cccgtttccacctcgtcctcggtgacgtcagcggtgagcattagtaaaacggtaaatggc
agcaattcctccgccgccgttgccagctcaatgatgctatccatgcaacaacaaaagacg
acagcaacagttgcaactgttagcattgcccaacaacagcagaagcagcaacaacaacaa
caacagacggaacaatcagtgacgtcagctacatcagtcacatcctcatcgttgtcatcg
tcgtcatcgtcagcatcgtcggcacccattgcaataattggggcaccaccgaatccagct
gctgcaccctttgtcagcagcatgtccgcccaaacgccgctgaaagcgcggaacgcaatg
ttgcgccaacaacaacaacagcagcagcaggattcacccgcaacaacagcagcggcaatg
atcggtggcgagaagtcgccgccacacggcatgacgccacatggtgcctcgcccatacca
accacattgccagcgagcgtgcatcaggagaacgttggtggcaccatctacttttatccc
acagcgaatgcgcccaataatcagcccgttgtcaattcggttgtggtggattccacacat
ccgtcgcatcccgcacatcatggcgttgtcagcgctgtggcgccactgaatgcagtggtg
ccatcgcagctgttgtatgctggccatgtttatccgggtccggcgtccaatgtgattgcc
atgcagccaaaaacgcaactggaatccgctttctttatgcccgacgagatgcgctccgac
atacttgcccgcaacgagatctccaatctgatcatggacgctgcggaagcggcccagcat
gctttgcctctcgaggtggacaactatcacgcactctatccgctggaggcgcctgcccaa
gcgatgcacaccaaactaaccctcccagcgagcacctatcgagccacgcacaacagcacc
ggattcaagtactgcctacgaagattacacggcttccgtttgcagtccacgaagtgcatg
acgctcgtcgagatgtggaagaaactgcaacacacgaatgtcgtccagctgcgcgaggtg
tttacgacaaaagcatttggtgataactccctagtattagtgtacgattattatcccggc
tcacagacattgctggccaaatactttacgcccgcgccggagaccaacggctacaccgat
ccattccaaggcgacgcacgccccttcagtcataagagcaacatgcagcgcacaaataac
ggacccctgctccccgagtcgacaatttggtcgatcatcatgcagctgaccgcgggcctc
agggctatccatcaagcgggactggcctgcaaaatactggatcccacaaagatcattgtg
actgggaaacgagtgcgcttcagctcctgctgcatctcagatatcacgcagttcgatccc
aatgcggcaaatcccctggcactggtcaacatgcatcagcaggacgatctgaccgcattg
ggtcgcttagtattagcgctggcctgtcgctgcctgcagtccgtgcagcgcgacaatgtg
cagtccagcattgatatggtaaccagaaactactccaccgatctacgcaattttattgtt
tacctcttcaccacgaataaccgccgctctgtaacggacctgatgccaatgattggcgca
cgcttctatacgcaactggatgcactccaggcacaggtggacatgcaggaggatgagctg
gccaaggaaatggagaacggtcgtctctatcgcactttggttaaactgaacagcatcaat
gaaagacctgacttcaatttggattgcacttggtcagagactggtgatagatatatgctg
aaattattccgtgattttctatttcattccgtcaccgaggatggccgaccctggctggat
cacgcacacatcgtacaatgcctcaacaaactggacgccggctccattgagcgcgtgcaa
ctgatgtcacgcgatgagcaatcggttttaattgtctcctatgctgaactcaagaattgt
ctggagaacgccttctccgaactgatgtcgacggcggccaattga
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