Drosophila grimshawi: 6557351
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Entry
6557351 CDS
T01061
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6557351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgr03041
]
6557351
Enzymes [BR:
dgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6557351
Spliceosome [BR:
dgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6557351
Complex C
U5 SnRNP specific factors
6557351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6557351
NCBI-ProteinID:
XP_001984930
UniProt:
B4J3P7
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTR
PEKTEERKQKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNERLKDRERKRDVDSLLGEVTDERFALLVNLGKKIT
DFGSDAVNALTAATNNEEQIDDTYGINVQFEESEEESDNDMYGEIRDDDGQDEGEEARID
HTLHAENLASEEAASNMKKERSLHPLDIDAYWLQRCLSKYYKDAMVSQSKAADVLKILKD
AADERDCENQLVLLLGYDCFDFIKQLKLNRQMILYCTMLASAQTDSERQRIREKMRGNTA
LAKILRQLDTGKADEQEEADARANKRGKGDADDGGAASAGQVAGVRQLLELDELAFTQGS
HFMANKRCQLPDGSYRKQRKGYEEVHVPALKQVPFDANEELQPIDKLPKYVQPVFDGFKT
LNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINSQDFKIIY
VAPMKSLVQEMVGNFGRRLACYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSYRPVALEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNAELKELLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFVSKLPDM
LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA
ACCLERSGLIKYERKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSL
SSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKHFPWSRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRATLRV
ELTITPDFQWDEKVHGQSEGFWVLIEDVDSELILHHEFFLLKQKYAQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNMPPTELLDLQPLPISALRQPKFEAF
YAQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFSQGSDGRCVYLV
SQESLADLVFADWHAKFGSLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQ
RKNVQQINLFIVDELQLVGGEEGPVMEIVCSRMRYISSQIEKQIRIVALSASLTDARDVA
QWLGCNPNATFNFHPSVRPIPLELHIQGFNVTHNATRIATMSKPVYNAILKYSPHKPVIV
FVSSRKQARLMAIDVLTYAASDLQPNRFFHAEEDDIQPFLERMSDKTLKETLAQGVAYLH
EGLSASDHRLVEQLFDSGAVQLAVVSRDLSWGMSISAHLVIIMDTQFYNGKNHSYEDYPI
TDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVV
TKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSRC
ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR
HHEEQVLRTLSQRLPNKLTGPNESAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQIL
SKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWTKDSYLRQLPHFNADIIKRCTE
KKIETVFDIMELEDEDRTRLLQLSDVQMADVARFCNRYPNIELNYEVVDKDRINSGSTVN
VVVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKARVKLDFVA
PSPGKHDYTLYYMSDSYLGCDQEYTFSIEVGDFQSESESESD
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgcagcacgtcaattgcagtacgagtacaaggcgaactcgaatcttgtg
ctgcaagctgatgtacgactcattgagcgtccgaggcgcgatgaagccaccggcgaggtg
tgctcactggtgggcaaattggatggcactcgcatgggcgatcgatatcagcgcacaagg
cccgagaagacagaagagcgcaaacagaagcgacagaaacgtgatgaggcgcaatacgat
tttgaacggatgaagggcgccacactgctctcggagggcatcgatgaaatggtcggcatt
gtgtatcgccccaaaacacaggagacgcgtcaaacctacgaagtgcttctcagtttcatc
caggaggcgttgggcgatcagccgagggatatattgtgcggcgctgccgatgaaattcta
gctgtgctcaagaatgaacgactcaaggatcgggaacgcaaacgcgatgtcgacagtctg
ctcggtgaagtgacagacgagcgtttcgcgttgctcgtcaatctgggcaagaagatcacg
gactttggcagcgatgctgtcaacgctttaacagcagccaccaacaatgaggagcaaatt
gatgatacatacggcatcaatgtgcaattcgaggagtccgaagaggagagcgacaatgac
atgtatggcgagatccgagacgatgatggccaggacgagggcgaagaggcgcgcatcgat
cacaccctgcacgccgagaatctggctagcgaggaggcggcgagtaatatgaaaaaggaa
cgttcgcttcatcccctggatattgatgcctattggttgcagcgttgtctcagcaagtac
tacaaggatgcaatggtctcgcagagcaaagcagccgatgttctcaaaatactgaaagat
gccgccgatgagcgtgactgtgagaatcaacttgtcctgctgctgggctacgattgtttt
gattttattaagcagctgaagctcaaccggcagatgatactctattgtacgatgctggct
tccgcacaaacggacagcgaacggcagcgtatacgcgaaaagatgcgtggcaatacggcg
ctggccaaaatcctccgtcaattggacacgggcaaggccgacgaacaggaggaggccgat
gcacgcgccaataagcgtggcaagggcgatgcagacgatggtggcgccgcatctgctggc
caggtggccggtgtgcgtcaattgttggaattggatgagttggcctttacacagggctca
cattttatggccaacaagcgttgccagctgcccgatggcagctatcgcaagcagcgcaaa
ggctacgaagaggtacacgtgcccgccctcaaacaggtgcctttcgatgccaacgaggag
ttgcagcccattgacaagctgccaaagtacgttcagcccgtcttcgatggcttcaagacc
ttgaatcgtattcaaagtcgcctctacaaggccgccctggacagcgatgagaatatgttg
ctgtgtgctccaactggagcgggtaaaacaaatgtcgctctgctcacgatgatgcgcgag
attggcaagcatatcaatgaagatggcaccatcaattcccaggatttcaagatcatctat
gtggcaccgatgaaatctcttgtccaggagatggtcggcaattttggacgtcgtcttgcc
tgctacaatctgacagtctctgagctgaccggagatcatcagttgacccgggagcaaatc
gctgccacgcaggtcatcgtctgcacccccgagaaatgggatattataacgcgtaagggc
ggcgaacggacgtttgtcagtttggtgcgattggtcatcatcgatgagatccatttgctt
cacgatgagcgtggtccggtgctggaggcgctcgttgcccgtaccatacgcaacattgag
accacccaggaggatgtgcgtctcgttggtttgtcggcaacgttgcccaattaccaggat
gttgccacatttctgcgcgtcaaaccggacaagggactcttctactttgacaacagctat
cggccagtggcgctggagcagcagtacattggtgtcactgagaagaaggcgctgaagcgc
ttccaggtgatgaacgagattgtgtatgagaagacaatggaacatgctggtcgaaatcag
gtgctggtctttgtgcactcccgcaaggagacgggcaaaacggcgcgtgctgtgcgcgac
atgtgcctggaacaggatacgctgggcagttttctgcgcgagggctccgccagcatggag
gtgttgcgcaccgaggccgagcaggtgaagaatgcggagctaaaggaactgctaccgtat
ggcttcgccatacatcatgcgggcatgacgcgtgtcgatcgtacccttgtcgaggatctg
tttgcagatcggcacatccaggtgctggtctcgacggccacgttggcctggggtgtcaat
ttgccggcgcacactgtgatcatcaagggtacacaggtctacaatccggagaagggtcgc
tgggtcgaactgagcgccttggatgtgctccagatgctgggacgtgctggtcgtccacaa
tacgacaccaagggcgagggcatcttgattacgaatcacagcgagctgcaattctatctg
tcgctgctcaatcaacagctgcccatcgagtcgcagttcgtgtccaagttgcccgacatg
cttaacgctgagattgtcctgggcacagtacagcatctgcaggatgctgtcaactggctg
ggctacacttatctgtacattcgcatgctgcgcaatcccaccttgtatggcgtctcgcat
gatgcgattaaagcggatccactgctggagcagcatcgggcggatctgttgcacacggct
gcctgttgcctggagcgcagtggcctcattaaatacgagcggaagacgggacactttcag
gtcaccgacctgggacgcattgcatcgcattattatctaacgcacgagacaatgttgacc
tacaatcagttgctcaaacagaccctcagcgaaattgaactgttccgtgtgttttcgctc
tcgtcggaattccggcacatctctgtgcgcgaggaggagaaactggagctgcagaagctg
atggagcgtgtaccgatacccatcaaggaatcgattgaggagcacagcgccaaggtgaat
gttctgctgcaggcgtatatctctcaactgaaactggagggatttgctctcatgtccgac
atggtcttcattacccaatccgcggcgcgtctcatgcgtgccatctttgagattgtgctg
acgcgaggctgggcccagctggcggataaaacgttgacgctgtgcaagatgatcgatcgt
cgcatgtggcaatcaatgacaccgttgcgccagttcaagaagatgcccgacgagattgcc
aagaagctggagaagaaacactttccctggtcgcggctctacgatctggagccgcacgag
ctgggcgaactgatccgtgtgcccaagctgggcaagaccatacacaagtttgtgcatcag
tttcccaaactggagctatccacacacatccaacccataacgcgggcaacgctccgcgta
gagctgacaattaccccggattttcagtgggatgagaaggtgcacggccagtccgagggt
ttctgggtactgatcgaggatgtcgactcggagctaatactgcatcacgagttcttcctg
ctcaagcagaaatatgcccaggatgagcatcagttgaagttctttgtgcccgtttttgag
ccattgccaccgcaatatttcttgcgcattgtctcggatcgttggattggcgccgagact
cagttgcccgtctcattcaggcatctaatcttgcccgagaaaaatatgccaccaacggaa
ttattggatctgcagccgttgcccatcagtgcgctgcgtcagcccaagtttgaggcattc
tacgcacaacgtttcccccaattcaatcccattcagacgcaggtcttcaacgccgtctac
aacagcgatgagaatgtgtttgtcggcgcaccgacgggctcaggaaagatgacaattgcc
gagtttgccataatgcgtctgtttagccagggcagcgatgggcgatgtgtctatctggtg
tcgcaggagtcacttgccgatttggtgtttgccgactggcatgccaagttcggatcgctg
gacatcaaggtggtcaagttgacgggtgaaacgggcacggatctaaaactaattgccaag
ggacagctggtgataaccacggcggataaatgggatgtgttgtcgcgtcgctggaaacag
cgcaagaacgtccaacagatcaatctgtttattgtcgacgaactgcagctggtgggcggc
gaggagggacccgtcatggagatcgtttgctcccgcatgcgttatattagctcccagatc
gagaaacagatacgaattgtggcgctctctgcatcgctgacagatgcacgcgatgtcgcc
cagtggctgggctgcaatccaaatgccaccttcaactttcatccgagtgtgcggccaatc
ccattggagctgcacatccagggattcaatgtgacgcacaatgccacacgcattgcgacc
atgtcaaagcccgtctacaatgccatactcaaatacagtccccacaaacccgtcattgtc
tttgtttcgtcacggaagcaggcacgtctcatggccatcgatgtgctgacatatgccgca
tcggatctgcagccgaatcgcttcttccatgccgaggaggatgacattcagccgttcctc
gagcgcatgtcggacaaaacactgaaggagacactcgcgcagggcgttgcctatctgcac
gagggcttgtctgcctcggatcatcgtctggtcgaacagctgttcgattcgggcgctgtg
cagctggctgttgtctcccgggatctgagctggggcatgagcatctcggcacatctggtt
atcataatggacacacagttctacaatggcaagaatcattcgtatgaggattatcccatt
acggatgtactgcaaatgattggacgcgccaataggcccaacgaggatgccgatgccaag
tgtgtgctcatgtgtcagagttccaagaaggatttcttcaagaagttcatcaatgagcca
ttgcccatcgagagtcatttggatcatcgcatgcacgatcatttcaatgccgaggtcgtc
acgaagaccatcgagaacaaacaggatgccgtcgattatctgacttggacattcctctat
cggcgactaacccagaatcccaactattacaatctgcagggcgtcacgcatcgtcatctg
tccgatcatctgtccgagcttgtcgaaaacacgctcagcgatctggagcagtcgcggtgc
ataagcgtagaggatgacatggacacgttgcccctgaatctgggcatgattgccgcctac
tactacattaactatacaaccattgagctcttcagtttgtcgctgaacagcaaaaccaaa
gtgcgcggtctgctggagattatctcatcagcggctgagtacgaggatgttgtggtgcgc
catcacgaggagcaggtgctgcgcacactctcccagcgcctgcccaacaagctgactgga
cccaatgaatcagcgcctaaattcaatgatcctcacattaagacgaatctgctgctgcaa
gcacatctttcacgcctccaactcggtccggagctgcagggcgatacggaacagatactt
agcaaggcgatccgcttgatccaggcctgtgtggatgtactgagttccaatggctggttg
tcgcccgctgtggctgccatggaacttgcgcagatggttacgcaggccatgtggaccaag
gattcgtatttgcggcagctgccacacttcaatgcggacattataaagcgttgcacagaa
aagaaaatcgaaactgttttcgatattatggagctggaagatgaggatcgcacacgcctc
ctacagctatccgatgtgcaaatggccgatgtggctcgcttctgcaatcgttatcccaac
attgaactcaattacgaggtggtcgacaaggatcgcatcaattccggctccacggtcaat
gtggttgtgcagctggaacgtgaggatgaggtcaccggtccggtcattgcgccattcttc
ccccagaaacgtgaggagggctggtgggtagtgatcggtgatcccaagaccaattcactg
ctctccatcaagcgtctgacgctccagcaaaaggccagagtcaagctggactttgtggcg
cccagtccaggcaagcacgattacaccttgtactacatgagcgattcctatttgggctgc
gatcaggaatacacattctccattgaagtgggcgatttccaatcggagagcgaaagcgaa
tccgactaa
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integrated database retrieval system
