KEGG   Drosophila grimshawi: 6557413
Entry
6557413           CDS       T01061                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dgr  Drosophila grimshawi
Pathway
dgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6557413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dgr03041]
    6557413
Spliceosome [BR:dgr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    6557413
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C DSE1_N PRP4 Beta-prop_EIPR1 ANAPC4_WD40 ASA1 Beta-prop_Aladin CFAP251_N Beta-prop_EML Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_Vps41 MIOS_WD40 WD40_RFWD3 WD40_like Beta-prop_SPT8 WD_LRWD1
Other DBs
NCBI-GeneID: 6557413
NCBI-ProteinID: XP_001983786
UniProt: B4J363
LinkDB
Position
Unknown
AA seq 559 aa
MSDDDDIQYIKRQRTLHYGSLEETERKRQNAATTASNAGTTPAAAAAAASTAATTTTTST
ATGAQLEDIDSDEDTYEEANKKSNTSNTKGAMAPPTAASLANKIDDDYFDLESEMERDKV
ALLEEFERKKRARQINVSTDDAEIKSNLRQLNEPICFFGEGPAERRRRLKELLASLGENA
IKQKQTEEEERKLQQREQEATWYHEGPETLRVARLWLADYSLPRARDRLERAREAQEVPS
ATRAGRMVEMQKKLQSLAPLCSQVGDTRPVSSAAFNHDSSLLMTSSWSGLCKLWSVPDCE
LKQTLRGHASYVGGVALRPGVNLDEQNVVAMASGGHDGAVKLWGFGNEESIADITGHMPH
RVSKVSFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYQSDGSVLVTGG
LDAFGRVWDLRTGRCIMFLEGHLGAIFGADFSPNGFHIATGSQDNTCKIWDLRRRQPVYT
IPAHTNLISDVKYQQDGGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVIAVDVSPNS
QYIATTSFDRTFKLWAPDS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtccgatgacgacgatatccagtacattaagcgacagcgcactctgcactatggctcg
ctggaggagacagaacgcaagcgtcaaaatgccgccacaacggcgtccaacgccggcaca
acgccggcagcagcagcagctgcagcctcaacagcggcaacaacaacaacaacatcaaca
gcaactggcgcccaattggaggacattgactcggatgaagatacctatgaggaggcgaac
aaaaagtcgaacaccagcaacacaaaaggcgcaatggcgccgcccacagctgcatcgtta
gcgaataaaattgacgatgattattttgatctggagtcggaaatggagcgggacaaggtg
gcgctgctcgaggaattcgagcgcaagaagcgcgcgcgacagatcaacgtgtccaccgat
gatgcggagatcaagagcaatctgcgccagctgaacgagcccatctgcttctttggcgag
ggtccggcggaacgaaggcgaaggctgaaggagctgctcgccagcctgggcgagaatgcc
atcaagcagaagcaaaccgaggaggaggagcgtaagctgcagcagcgcgaacaggaggcc
acgtggtatcacgagggacccgaaacgttgcgtgtggcacgtctctggttagcagattac
tctctgccccgggcacgggatcgcttggagcgcgcgagggaggcacaggaggtgccgagt
gcaacgcgtgccggtcgcatggtcgagatgcaaaagaagctacaatcgctggcgccactc
tgctcccaagtgggcgatacgcggccggtcagcagtgctgccttcaaccacgattcatcg
ctgctgatgacctcctcctggtcgggtctgtgcaagctctggagtgtgcccgactgcgag
ctgaagcagacgttgcgcggacatgccagctatgtgggtggcgttgctctccggccgggt
gtcaatctggacgaacagaatgtggtggccatggcgtcgggcggccatgatggtgccgtc
aagttgtggggctttggcaatgaggaatcgattgctgatattacgggacacatgccgcat
cgcgtgtcaaaggtatcgtttcatccgtcgggtcgtttcctggccactgcctgctacgac
tcatcgtggcgtctatgggatctggagcagaagacggaggtgctgcatcaggaggggcac
gccaagccggtgcactgcctcagctatcagtcggatggcagtgtcctggtcaccggtggc
ctggatgcctttggacgcgtttgggatctgcgcaccggtcgctgcatcatgttcctcgag
ggtcacctgggtgccatttttggggcggacttctcgccgaatggatttcacattgcgact
ggttcgcaggacaatacctgtaagatttgggacctgcgtcgacgtcagcccgtctacaca
attccagcgcacacaaatctcatctcggacgtgaagtatcagcaggatgggggcagcttt
ctggtcacctgctcgtacgattcgaccaccaaaatctggtcgaacaagacgtggcagcca
ctcaagacgctccaaggccatgacaataaggtgattgctgtggatgtctcgcccaattcg
cagtatatagcgacgacctccttcgatcgcaccttcaagttgtgggcgccagatagttga

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