Drosophila grimshawi: 6557418
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Entry
6557418 CDS
T01061
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
dgr
Drosophila grimshawi
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dgr04147
]
6557418
00535 Proteoglycans [BR:
dgr00535
]
6557418
00536 Glycosaminoglycan binding proteins [BR:
dgr00536
]
6557418
Exosome [BR:
dgr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
6557418
Proteoglycans [BR:
dgr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
6557418
Glycosaminoglycan binding proteins [BR:
dgr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6557418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
6557418
NCBI-ProteinID:
XP_032592249
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MRCILLIVWLVLPYLAPVLGALEFVGQGIKDALGEYMLTDIMTDANTGIEFADGEDGFPA
FKFLSTADVKSPYQMLLPEKLYEFAILITYRQGSLKGGYLFSVVNPLDTVVQLGVHLSPV
VKNSYNVTLVYALPDHSPGRKLASFAVDHVTDKWNSIAFQVYNDKVVFYYDCKVRNTTAV
VRDPFVLAFESASTLYIGQAGSIIGGHFEGYLEKIYVYTNPEAIIIQCMSQPKPTAAVST
ELDDETATESTSEMFADTEENSPPDESDIDQNDITNDNWWLQASDNFDDSGLQTPGQTPF
THERPLRGVKGEKGDRGPKGDSIRGPPGPPGPPGPKGETPAYPPFIETPSAGAKYTGECT
CNASDILEAFKDNETIRVTLRGPPGAQGRDGKTGAPGLTQPVERSLSRTLQYIKRKAGAT
GVTGARGPEGIQGEKGEPGVDGMPGVMGPPGPAGPPGLPESYDESLMGNSMTNLRSSTST
QAGPKGATGDKGESGRPGDRGEKGHKGAHGPAGPKGEPGAPGLPGLAGQPGDGNGTKGER
GEKGEKGMRGRRGGTGSTGPIGPPGKPGPTGDIGHSGRPGMLGPKGDSGAKGAKGDAGGR
DGIKGEKGDRGGDGRDGLPGPPGLPATGGGDSESSSIQYIPMPGPPGPPGPPGMPGLTLS
GQKGEPGMDSRSSFFGDASYYGRPGARSSLDELKALRELQDLRDRPTDGTAEPPRQTAHS
HKHEESPLGVELGMGLGDGEELPYLSASSSNMNMRIVPGAVTFQNIDEMTKKSALSPPGT
LAYITEEEALLVRVNKGWQYIALGTLVPIATPAPPTTVAPSLRFNLQSKNLVNSPPPLLN
TPTFTTAPEYETWYPRMLRLAALNEPYVGDLQGIRGADFACYRQGRRAGLLGTFKAFLTS
RVQNLDSIVRSADWELPVVNTRGDVLFNSWKGVFNGQGGFFSQAPRIYSFNGKNVLTDPL
WPLKLVWHGSLPNGERSMDTYCDAWHSSSHEKFGYASNLLGNKVLDQERQPCDGKLIVLC
VEALSQDRRKKRDISSSRSRSSSYSHGRSDSELEFQTAEEYAEHLENLRL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcattctgctcatcgtttggctggttttgccgtatttagctccggttctgggt
gcccttgaatttgtgggccaaggcattaaagatgcactgggtgaatatatgctgacggac
ataatgaccgatgcgaacacaggcattgagtttgcggacggcgaggatggttttccggcc
ttcaagtttctgtccacagccgatgtgaaatcgccgtatcaaatgttgctgcccgagaaa
ctgtacgagtttgccatattaatcacttatcgccagggctccctcaagggtggctatcta
ttcagcgtggtgaatccactggacactgtcgtgcagctgggcgtccatctgtcgccggtg
gtgaagaacagttacaatgtgacactggtctacgcactgcccgatcacagtccgggacgc
aagctggccagctttgcggttgaccatgtgacggacaaatggaactcgattgcattccag
gtgtacaacgacaaggtggtcttctactacgactgcaaggtgcgcaacacgacggctgtg
gttcgagatccctttgtactcgcctttgagtccgcatccactttgtacattggccaggct
ggctctataatcggtggccattttgagggatatttagaaaaaatctatgtttataccaac
ccggaggctataataattcaatgcatgtcacagccaaagccaacggcagcagtgtcaacg
gaattggatgatgagacggctaccgaatcaaccagtgaaatgtttgcagatacagaagag
aattccccacccgatgaatcagatattgatcaaaatgatattaccaatgacaattggtgg
ttgcaggcaagtgacaatttcgacgacagtggattacagacccccggacagacgccgttt
acgcacgaaagaccattacgcggcgtcaagggcgagaagggcgatcggggacccaagggc
gatagtatacgtggcccgcccggaccaccaggtccgccgggccccaaaggtgaaacgcca
gcatatccgcctttcatcgagacaccaagtgcgggggctaaatacactggcgaatgtaca
tgtaatgcgtctgatatcctggaggccttcaaggacaatgaaacgattcgtgtaacgttg
cgaggtccgcccggtgcgcagggcagggatggcaaaaccggcgcccctggacttacccaa
cctgtggaacgcagcctctccagaacattgcaatatatcaaaagaaaagcgggtgccact
ggcgttacgggcgctcgcggcccggaaggtatccagggggagaagggcgagccaggcgtt
gacggcatgcccggcgtcatgggtccaccaggacctgcgggcccgcctggcttgccagag
agctacgatgaatccttaatgggcaactcaatgaccaacctacgcagctccacatcaacg
caggcaggaccaaagggagcgaccggcgataagggtgaatccggacgtccaggagatcgc
ggtgaaaagggccacaaaggtgcacacggaccggctggacccaaaggtgagcccggagca
cccggcctgcctggattggctggccaaccgggcgatggcaatggcaccaaaggcgaacga
ggcgaaaagggggagaagggtatgcgtggccggcgcggaggcactggcagtacaggacca
attggaccgccaggcaaaccaggacccacgggtgatatcggacactcgggacggcctggc
atgctcggacctaagggtgattctggtgctaaaggtgctaaaggagatgcgggtggacgt
gacggaatcaaaggggagaaaggtgatagaggcggtgatggacgtgatgggttgccagga
cctccgggtctaccagccactggtggcggtgatagcgaaagtagtagcatacaatatata
ccaatgccaggaccaccaggaccacccggtccacctggcatgccaggactaacgctcagc
ggacaaaaaggagagccaggaatggactcgcgcagcagcttctttggtgatgcctcctac
tacggccgaccaggtgcgcgctcatctttagacgaacttaaagcactgcgagagctgcaa
gatctgcgtgatagacccacagatggcacagctgagccacctcgccaaacggcgcactcg
cacaagcatgaggagtccccgttgggtgttgaattgggcatgggattgggagatggcgag
gagctgccatatctttccgcatcatcatccaacatgaacatgagaatcgtgccaggtgca
gtcaccttccagaacatagacgaaatgacaaagaaatcggcgcttagcccacccggcacc
ctggcgtacattaccgaggaggaggcactgctcgtgcgcgtcaacaaaggctggcagtat
atagcgctgggcactttggtaccgattgcaaccccagcaccgcccaccacagtggcgcca
tctttgcgctttaatttacaatcgaaaaacttggtgaacagtccacctccgttgctcaac
actccgacgtttacaaccgcgcccgaatacgaaacgtggtatccacgtatgcttcgcctg
gcggctctcaatgagccctatgtgggtgacttgcagggcattcgaggcgcggactttgcc
tgctatcgccagggccgacgagctggccttctgggcacatttaaggccttcctcacgtcc
agggtacagaatctagactctatagtgcgttcggctgactgggagctgccagttgtaaat
acccgaggcgatgtgctttttaattcctggaagggcgtatttaatggccaaggtggcttc
ttctcgcaggcaccgcgaatttatagctttaacggcaagaatgtcctcacggatccatta
tggccactcaagctggtctggcatggttcgctgccgaatggagagcgctccatggacacc
tactgcgatgcctggcactcgagctcacatgagaagtttggctacgccagcaatctgctg
ggcaacaaggtgctcgatcaggaacgccagccctgcgatggcaagttgatcgtgctctgt
gtggaggcactctcccaggatcggcggaaaaaacgtgacatcagcagcagtcgcagtcgc
agcagtagttacagtcacggtcgcagtgacagcgagctggagttccaaacggccgaggaa
tatgccgagcatttagaaaatttacggctgtaa
DBGET
integrated database retrieval system
