Drosophila grimshawi: 6559342
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Entry
6559342 CDS
T01061
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
dgr
Drosophila grimshawi
Pathway
dgr03013
Nucleocytoplasmic transport
dgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6559342
09122 Translation
03013 Nucleocytoplasmic transport
6559342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6559342
03041 Spliceosome [BR:
dgr03041
]
6559342
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
6559342
Spliceosome [BR:
dgr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6559342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DWNN
CCDC122
Motif
Other DBs
NCBI-GeneID:
6559342
NCBI-ProteinID:
XP_032590636
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MNMEDVLNTQFVKLKEAMDNLFELKSSGHVSDFKQSSGALMFVALKHSNREVKRNIKSGR
DELHLQKSKVDLSRLQLQNLLYEVSHLKKEIVRCQKLKSRDTYLELLSDKEYASKFSANG
EEMNSDMSSHKTHLYRLECELRLRKELDSQYNALLTSKQELLQANLSQTQRYLSFAPALR
TLQDSTKPLHDALQLSLDVEWKLNSIVKYLPRALYILFINLKSLQRAKEFPFNSEIVGFE
NDAQMQELLLDTENTLKERRNFAEKSNVMESVPDNLLGRLLKPHPLYISLVIESPDKSSE
LILLIRYWELLKCVTVRAQFSNNALTNNAQGDINLANDLLAHLYDDDLGHDIPVPGIEYE
LRNFNLTXEECMEYLVKNGYGKPYCWLQSMCSIATIDKKKFFKHELNLHKWIIEVFQRIS
KRWRSWLRLNQQIRGLTYKDVDMYTLRENIYPEGLSCSLVQWTAISHEEFNIQNSDLLNN
LSPANGITYTSYRAVIVRGSAKMECFIRIPSNYPLEIPLWILSVHWNGRHTAMNNAAIKM
MEFWTNSLRPKQLEKNHRLLYSQLFRTIYSFDIFLETEGAMQATREYNKEKPYISTFTKR
IRLRPYKYIRKGSMYTFKQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaagatgtgttaaacactcagtttgtcaaattaaaagaagccatggataat
ctcttcgaattgaagagcagtggacatgtttcggacttcaagcaatcttcaggtgcatta
atgtttgtcgcactcaagcattccaatcgggaagttaaacgtaacattaaatctggacga
gatgaattgcatttgcagaagtcaaaagttgatctcagccgactgcaactgcagaatcta
ttgtacgaagtcagtcatctgaaaaaggaaattgttcgttgtcagaaacttaagagtcgc
gatacatatttagaattattgtcggataaggaatacgcaagcaagttttctgctaatggt
gaagaaatgaattcagatatgtccagtcacaaaacacatttatatcgattggaatgcgag
ctccgattgcgtaaagagcttgatagtcaatacaatgccttgctcacctccaaacaggag
ctgctgcaggcaaatctcagtcagacacaacgatatctctcattcgctcctgcattgcga
acactgcaggactccacaaaacccttgcacgatgctctacagttatcccttgatgttgaa
tggaaattaaactcaattgttaaatatttaccacgtgcgttatatatattatttatcaac
ctgaagtctttgcaacgtgccaaagaatttcctttcaattcggagatagttggctttgag
aatgatgctcaaatgcaggaattgctgctggatacagaaaatactctaaaggaacgtcga
aattttgcggaaaaaagtaatgttatggaaagtgtaccggataatctattgggacgtcta
cttaagccccatccactttacataagtcttgttatcgaaagcccagataagtcatctgaa
ttgatattattgatccgttattgggaattactgaaatgtgtcacagtgcgtgcacaattt
agcaacaatgctctcacaaataatgcccaaggagatataaatttggctaacgatctgctt
gcgcacttatacgacgatgatttgggccacgatattcctgtgccaggcatcgaatatgag
ttacgcaacttcaatttaacgnaggaagagtgcatggagtatctggttaaaaatggatac
ggaaaaccatattgctggctgcaaagcatgtgctccatagcgaccattgataagaagaag
tttttcaaacacgaattaaatttacacaagtggataatagaagtatttcaacgaatttca
aaacgttggcgctcttggttacgcttaaatcagcaaattcgaggcttgacctataaggat
gtcgatatgtacactttaagggagaatatctacccagaaggcttatcctgtagcctggtg
cagtggaccgcgatctctcacgaagaattcaatattcaaaattcggatttactaaacaac
ttatcgcctgccaatggcattacatacacctcctaccgggcggtaattgtgcgtggatcc
gctaaaatggagtgctttattcgtatacccagtaactacccattggaaataccactctgg
attctaagcgtccattggaatggacgacatactgctatgaacaatgcggctattaagatg
atggaattctggacaaactctttgcggcccaagcaattggagaagaatcatcgactgctt
tattcgcagctcttccgcacgatttatagcttcgacatatttcttgagacagaaggagcc
atgcaggcgacaagagagtacaataaggaaaagccctacattagcacattcaccaagcgg
attcgcttgcgtccatacaaatacattagaaagggttccatgtatacatttaagcaatga
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