Drosophila grimshawi: 6559947
Help
Entry
6559947 CDS
T01061
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03440
Homologous recombination
dgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
6559947
03450 Non-homologous end-joining
6559947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgr03032
]
6559947
03400 DNA repair and recombination proteins [BR:
dgr03400
]
6559947
DNA replication proteins [BR:
dgr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
6559947
DNA repair and recombination proteins [BR:
dgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
6559947
BRCA1-C complex
6559947
NHEJ (non-homologous end-joining)
MRX complex
6559947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6559947
NCBI-ProteinID:
XP_001986594
UniProt:
B4J9P7
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSTIEKLSIQGVRSFGANAEDMQSITFSSPITLILGQNGCGKTTIIECIKYALTSQCPPG
SDSGKRFVHDPKIFRKSECLGQVKILMRNRLDARLSICRSMKLSVRNNKTTFNKVDCAVN
FLGSDSQESMSFRRENTDSAVADFMGVSQAIINNVLFCHQEDSSWPLDEPKKLKEKFDAI
FGITEYNKALDRIIALRKSAQEKLKVMESDMRVYEYIKKEMDEKTLGLQKAQRKLEDIKM
ECDKCDADVKPIDGRLEEIRNIEFDIGKYQAQKVEMDTKHKNCVEQIEKLSGNIKSHFTG
SIAELEVEIRSFNQRMSEMKFQTTDVEEQLERLKTSNTDQQNKLVKQEKERCVAQQKYRN
EQNYKLQLTDSLQVLCVQLEICVRANAVDNPQQLSSLLDEIDLMLISKQREITKQSEEND
QADQSRQAKIDDLRTDITKSEQSVSSQQKQKKASEVESQSLELKINEIEKSLEQLKVLEK
KIADTDDEYERTTRIFNQEECRQLIANKKVSIAEKRARFNKLDEQLTFLSSIAKLMAEIG
LKEKELEKKKQEIHRGRSKHSDNFVKFFKEPITSNYRHSMKTEYDKLRRDIQDLNDNANR
QKIEEQSHEINRKNLIGDIARMEKELHELEERIYEKCHAARYDELLLRSKEAISRFQLEH
GALKSAENMYKKYIQKINEEPSCPLCHHNMSGDEALDLTTDLTDEIQKLPDNIAKTEKAL
KAEQSKYEELLQIKPAIDKVQELKELLPKKKEELRMIGQRLSEIVAKYETLKEQLGEPTV
NMELANSMLPDMTLLDESLKESARVKKDLDQLKLKLPASYDASVNTEALQAEKTEVSKEI
VADAKALETEQQNFEQKMEALHQLREKKNGLKDKMIKLKEGEQSLPQFKERQDELSNLLI
ALTAEISELESKIRPLKQRLSSALSEKARLKESERVKLSEMQKKYQEYKSTDQDIQRLKK
EMQEFAKLDLANAIKKLDAAINGTNEELNKLKGKIIETSEKLESVKTECLNQETLERDLK
DNRELKQLQQKQSKLSEICQTLSEQLGNLDFRNVTKEKQELSKKQKEAYVRRAQLFGQLG
EIQIQVENLQRDIDQPKYKQSMNNYRRAQFEVAVKRRGIDDLGQHRVALEWALIQFHAEK
MSNINSLIREYWRMIYKGNDIDYIQIKTNDEDDDKKASADRRKSYNYRVVQSKNNSEIEM
RGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTNLDRDNIISLCDALNSIVENRQ
FQSNFMLIIITHDENFISSLGRINSYHRVYRNPEGKSVIQKVRVDDK
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaattgagaaactttctatacagggcgttcgcagctttggcgccaatgccgaa
gacatgcagagcattacattttcatcgccaattacattgattcttggccaaaacggctgc
ggcaagacaaccataatcgagtgcattaaatatgcgctcactagccagtgtccgccgggc
agcgatagcggcaagcgattcgtacatgatccaaaaatattccgcaaaagcgaatgcctc
ggccaggtgaagattctgatgcgcaacagactcgatgcacgtctctcaatctgccgcagc
atgaagttgtccgttagaaacaacaagactacatttaataaagtcgattgtgccgtcaac
tttcttggcagcgacagtcaggagtcaatgagctttcggcgagagaataccgattcggcc
gttgctgattttatgggcgtttcgcaggcaattatcaacaatgtactcttttgtcaccaa
gaggactcaagctggccactggatgagcctaagaaactgaaggagaaattcgatgcgatc
tttggcattacagagtacaataaagcgctcgacagaatcatcgcattgcgcaaatcagcg
caggagaagctcaaagtgatggaatcggacatgagggtgtatgagtacataaaaaaagaa
atggatgagaaaacgttgggcctgcaaaaggctcagcgaaaattggaggatatcaaaatg
gaatgcgacaagtgcgatgcggatgtaaaacccattgatggccgactggaggaaatacgc
aatatcgaattcgatattggcaaatatcaggcgcagaaggtcgaaatggacactaagcac
aaaaattgcgtggagcaaatagagaagctgtccgggaacatcaaaagccattttacgggc
tcaatcgcagaattggaagtggaaatacgtagttttaatcagcgtatgtccgaaatgaaa
tttcaaaccaccgatgtggaggaacaactggagcgattaaagacatcaaatacagatcaa
caaaataagctggtcaagcaggaaaaggaacgctgcgttgcacagcagaagtacagaaac
gagcagaactacaaactacagctgaccgatagccttcaggtgctgtgcgtgcagttggaa
atatgtgtaagagccaatgctgttgataatccccaacaattatccagtctgctcgacgag
attgatttgatgctgatcagcaagcagcgtgagattacaaagcagagtgaggagaacgat
caggcggatcaatcgcgtcaggcaaagatcgacgatctgcgtaccgatataaccaagtcg
gagcaaagtgtcagctcgcagcagaagcaaaagaaagctagcgaagtggagagccaatct
cttgagctaaaaattaatgaaattgaaaaatcattggaacagctcaaagtgttggagaag
aaaattgcggacacggatgatgaatatgagcgcacaacgcgcatattcaatcaggaggag
tgtcgccagctcatagctaacaaaaaggtgtccatagctgaaaagcgagcgcgttttaat
aagctagacgagcagctcacattcctcagctccatagccaaattgatggctgagatcggt
ctgaaggaaaaggagctggagaagaagaaacaggaaatccatcgaggccgtagcaagcac
agtgataatttcgtcaaatttttcaaggaacccattactagcaactatcgtcacagcatg
aagactgaatacgataagctacgccgcgacatccaggacttaaacgataatgctaaccgg
cagaagatcgaggagcaatcacatgagatcaatcgcaagaatctaattggcgacattgcg
cgcatggaaaaggaattgcacgagcttgaggagcgcatttacgagaagtgccacgccgca
cgctacgatgagttgctgctacgcagcaaggaagccatatccaggtttcaactggagcac
ggagctctcaaatccgccgagaacatgtacaaaaagtatattcaaaagatcaatgaggag
cccagctgcccattgtgtcatcacaacatgtctggtgatgaggccttggacttgacaaca
gatctgacggatgagatacaaaaactgcccgataacattgccaaaacagagaaggcctta
aaagcagagcagtcgaaatatgaagaactactgcagatcaagccagctattgataaggtt
caggaactcaaagaattgctgcccaagaagaaggaagaattgcgcatgattgggcaacga
ttgagcgaaatagttgctaaatatgagacgctaaaggagcagctcggtgagccaacagtc
aacatggagttggccaattcaatgttaccagatatgacactgcttgatgaatcgcttaag
gagtctgcacgcgtcaagaaagatttagatcagctaaagctcaaactgcctgccagctat
gatgccagcgtgaatacggaggctctgcaagcggaaaaaactgaggtgtccaaggagatc
gtagccgacgccaaggcgctggagacagaacagcaaaactttgagcagaaaatggaagca
ctgcatcaattgcgtgaaaaaaaaaatggcttgaaggacaagatgatcaagctgaaggag
ggcgagcagagtttgccgcaattcaaggaaaggcaagatgagctttccaacttgctcatc
gcattaacagcagagataagcgaactcgaatcaaagattcgacccctcaaacaaagattg
agctcagctttatccgaaaaggcgcgtcttaaggagagcgaacgtgttaaattgtcggaa
atgcagaagaaataccaggaatacaagagcactgatcaggatatacagagattaaagaaa
gagatgcaagaatttgccaaattggatctagccaatgccatcaaaaaacttgatgcggcc
ataaatggaaccaatgaagaacttaataaattgaaaggaaaaattattgaaactagtgag
aaactggaatctgttaaaacagaatgcctcaatcaggagacactggagcgcgatcttaaa
gataatcgtgagctgaagcagctgcagcagaagcaaagcaaactcagtgaaatctgtcaa
actctgtccgagcaactgggcaatttggactttcgcaacgtgacgaaagaaaaacaagag
ctgtcgaaaaagcaaaaggaggcttatgtccgacgcgctcaactatttggccagttgggc
gagattcaaatccaggtggaaaatctacagcgtgatatcgaccagcccaaatacaagcaa
tccatgaacaattataggcgtgcccaattcgaagtggctgtcaaacgtcgcggcatcgat
gatctgggccaacatcgtgtggcgctcgaatgggcgctgattcagtttcatgccgagaaa
atgagcaacataaacagcctgatacgcgaatactggcgaatgatttacaagggcaacgat
atcgattacatacaaatcaagactaatgatgaagatgatgataagaaagcgtctgcagat
cgacgtaagagctacaactatcgcgtggtgcagtctaagaacaattcagagattgaaatg
cgtggacgctgcagtgccggtcaacgtgtcctcggttcgcttatcattcgcatggccctc
gcggagacattcagcagcaactgtggcgtccttgccctggacgagccgactaccaatctg
gatcgggacaatattatttcgctatgcgatgcgctcaatagcatcgtcgagaatcgtcaa
tttcaatcgaatttcatgctgattataatcacccacgatgagaatttcatatcgtccttg
ggtagaatcaatagttatcatcgtgtatatcgcaaccccgaaggcaaatctgttattcaa
aaggtgcgcgtcgatgataaatag
DBGET
integrated database retrieval system