Drosophila grimshawi: 6559952
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Entry
6559952 CDS
T01061
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dgr
Drosophila grimshawi
Pathway
dgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6559952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgr03041
]
6559952
Spliceosome [BR:
dgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6559952
Complex C
U5 SnRNP specific factors
6559952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
6559952
NCBI-ProteinID:
XP_001987870
UniProt:
B4J4N2
LinkDB
All DBs
Position
Unknown
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPPNAWAAQLIAQQQAYAAAHAQHAQLHAQQQMANQIQQIPPPGAPLPSAGHA
NGIPVPAVGVPQPQLGQIPTPKPDILTEDKLQEKAMKWQQLQSKRFAEKRKFGFIDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTPFVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNANSKIQEPLPDDDEDFSLPDDVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPVPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQDVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQIPNDFLTFQDAGT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNALPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccgccgtatatgattccgcccaacgcctgggccgcccaactgatagcccag
cagcaggcgtacgcggcggcccatgcacagcatgctcagctgcatgcccagcagcagatg
gctaaccagatacagcaaatccctccgccgggcgcacctttgccgtctgcgggccacgcc
aatggcattccggtgccggcagtgggcgtgccgcagccacagctgggtcaaatacccaca
cccaaacccgacattctcaccgaggacaagctgcaggagaaggcgatgaagtggcagcaa
ctgcagtcgaagcgattcgcagagaaacgcaaatttggctttattgacacacagaaggag
gacatgccgccggagcatatacgtaaaattattcgggatcatggtgatatgacctctcgc
aagtatcgtcacgataagcgagtttacctgggtgcactcaaatacatgccgcatgctgtg
ctgaagctgctcgagaatatgcccatgccgtgggaacagatcagggatgtgcaggtcctg
tatcatattacgggtgccattacctttgtcaatgagataccctgggtcattgagccagtt
tacattgctcagtggggcaccatgtggattatgatgcgtcgtgagaagcgcgatcgtcgt
cactttaaacgaatgcgtttcccgccctttgacgatgaggagccgccgttggactatgcg
gacaacgttttagatgtcgaaccgctggaggccatacaaattgagctagataacgatgaa
gataatgccgtctacaaatggttctatgatcatagacccttagtcgacacgccgtttgtg
aacggctccacgtaccgcaagtggaatctatctctgccacagctggcaaccctttatcgc
ctggccaaccagctgctgactgacctggtcgacaataacttcttttatttgtttgatcca
aagagtttctttaccgctaaggcgcttaacatggccataccaggtggcccaaagtttgag
ccgctgatcaaggatcacaatgttggtgacgaggactggaacgagttcaatgatataaac
aaggttattataagacagcccattcgcaccgagtatcgtattgcgtttccatatctgtac
aacaatatgccacattttgtgcatctaagctggtaccatacgcccaatgtggtctacatc
aaaaccgaagatccggacttaccggccttctactttgatccacttatcaatcccatttca
catcgcaatgccaattctaaaatccaagagccattgcccgatgatgatgaggacttttcg
ctgcccgatgatgtgcagcccttcttgcaggacacaccgctctatacggataatacagcc
aatggcattgcgctgttgtgggcaccgcgtccgtttaatatgcgctcgggacgttcacgt
cgcgctatcgatgtgccgctggttaaatgctggtacaaggagcattgtccacctggtcat
ccggtcaaggtgcgcgtcagctatcagaagctgctcaaatactatgtgctcaatgccctg
aagcatcgcaagccgaagccacaaaagaagcgatatttgttccgctcctttaaggcgact
aaattctttcaaacaaccaccttggattgggttgaggctggactacaagtgtgtcgccag
ggctataacatgctcaatttgcttatacatcgtaagaatctaaactatctgcatttggac
tacaatttcaacttgaagccggtaaagacgctgactaccaaggagcgtaaaaagtcacgt
tttggcaatgcttttcatttgtgccgtgagattctgcgcctgaccaaactaatcatcgat
tcgcatgtacagtatcgtctcaacaatgtggacgcctttcagctggctgatggcctgcag
tatatctttgcacacgttggccagctaacaggcatgtatcgctacaagtacaagctaatg
cgacagatacgcatgtgcaaggatctgaagcatctgatctactatcgctttaatacggga
ccagtgggtaagggtcctggttgtggcttctgggcaccgggttggcgtgtttggttattc
tttatgcgtggcataacaccgctgctggagcgttggctcggcaatctgttgtcgcgtcaa
ttcgagggtcgtcattcgaagggagtcgcgaagacggtgacaaagcaacgtgtcgaatca
catttcgatttggagttgcgtgcctcagttatgcacgatattgtcgacatgatgcccgag
ggcatcaagcagaacaaggcgcgcaccatactccagcatctgtctgaggcttggcgctgc
tggaaggccaatataccgtggaaggtgcccggtctgcccatacccattgagaacatgatt
ctgcgctatgtcaaaatgaaggccgattggtggacaaatacggctcactacaatcgtgag
agaatacgccgtggcgccaccgtcgacaagactgtgtgcaagaagaatttgggccgtttg
acacgtctgtatttgaaggcagagcaggaacggcaacataactacctcaaggatggcccg
tatatatcgcccgaggaggcggtcgccatatataccacaacggtgcattggctggagtcc
cgccgctttgcaccagtcccctttccacccctctcctacaagcacgataccaagctgttg
attttggctctggagcgcctcaaggaggcatacagtgtcaagtcacgtttgaatcaaagc
cagcgcgaggagctcggcctgattgagcaggcttatgataatccccatgaggcactctcc
cgcatcaagcgtcacctgctaacacagcgcgctttcaaggaggtgggcattgagttcatg
gacttgtatagtcatttgatacctgtgtacgaggtcgagccactggagaagattacggat
gcttacttagatcagtatctgtggtatgaggcagacaagcgccgcctctttccgccatgg
attaagcccagcgatacggaaccaccgccattgctggcctacaagtggtgtcaaggcatc
aacaatctgcaggatgtctgggatgtgggtgagggtgaatgcaatgtgttgctcgagtcg
cgctttgagaagctgtacgagaagattgatttgaccttgctaaatcgtctgctgcgtttg
attgtcgatcacaacattgctgattatatgacagccaagaataacgtggtcatcaactac
aaggacatgaatcataccaacagctatggcatcatacgcggtctacagttctcttccttt
ataacgcagtactacggacttgttttggatctgttggtcctgggcctgcatcgctccagc
gaaatggctggcccaccgcagataccaaacgatttcctaacattccaggacgccggcaca
gaaacagcgcatcccatacgtctttactgtcgctatgtggatcgtatacatttgttcttc
aggttctcagctgaagaggcgcgagacctgatccagcgttatctcaccgagcacccggat
cctaacaatgagaacattgtgggctataataacaaaaagtgttggccacgcgatgcgcgc
atgcgtctgatgaagcatgacgttaatcttggtcgtgctgtcttctgggatatcaagaat
cgtttgccccgctcggtgaccaccattggctgggaaagcacattcgtttcggtctattcc
aaggataatccaaatcttctctttaatatgagcggcttcgagtgtcgcatactgccaaag
tgtcgcacccaaaacgaggagttcacgcatcgtgatggcgtctggaatttgcagaatgaa
ataaccaaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtcactgggacgt
ttccataatcgtgtgcgacagattttgatggcctccggttccacgacattcacaaagatt
gtcaacaaatggaatacagcgcttattggcctcatgacctatttccgtgaggctgtggtc
aacacacaggagctgctggatctgctggtcaagtgcgaaaacaaaatacagactcgtatc
aagattggcttgaactccaaaatgccttcacgttttccgcccgttgtgttctacacgccc
aaagagttgggcggcctgggcatgttgagtatgggtcatgtgctgattccacaatccgat
ctgcgctggtccaagcaaaccgatgttggcattacgcatttccgctccggtatgtcgcat
gacgaggatcagcttataccaaatctgtatcgctacatacagccgtgggagagtgagttt
attgactcgcagcgcgtttgggccgagtatgcgctgaagcgtcaggaggcaaatgcacag
aatcgtcggcttaccctggaggatttggaagacagctgggatcgtggtataccgcgcata
aatacgctcttccagaaggatcggcatacgctggcctacgacaagggctggcgcatacgt
acagagttcaagcagtatcaggtgctcaagcaaaatcccttctggtggacgcatcagcgg
cacgatggcaaactgtggaatctgaataactatcgcacagatatgatacaggcgctgggt
ggcgtggagggtattctggagcacacactcttcaagggcacatacttccccacctgggag
ggtttgttctgggaaaaggcatccggctttgaggagtccatgaagtacaagaagctgaca
aacgctcagcgttccggtcttaaccagatacccaatcgtcgctttacactctggtggtca
ccgaccattaatcgcgcgaacgtctatgtgggtttccaggtgcagttagatttaacgggt
attttcatgcacggcaaaattcccacgctgaaaatttcgttgattcaaatctttcgtgct
cacttgtggcaaaagatacacgaatccattgtgatggatttatgtcaggtgtttgatcag
gaactggacgccctcgagatcgagacagtgcaaaaggagacaatacatccccgcaagtca
tacaaaatgaactcatcctgtgcggacatcctgctcttcccagcctacaagtggaacgta
tcgcgtccgtcgctactggcggacaccaaggataccatggacaatacaaccacacagaag
tattggttggatatacaactgcgttggggcgattatgattcgcacgatgtggagcgttat
gcgagagccaagttcttggattacaccacggataacatgtccatttatccatcgccgacg
ggcgtgctaattgccatagatttggcctacaatctgcactcggcctatggcaattggttc
cccggctgtaaaacgctcatacaacaggccatggccaagattatgaaggccaatccggcg
ctttatgtgttgcgtgagcgcatccgtaaagcactgcagctatactcctcggagccaacg
gagccgtacctgagctctcagaattatggtgaattgttctcgaatcagatcatttggttt
gtggacgatacgaatgtgtatcgcgtgaccattcacaagacctttgagggcaatttgaca
acgaagccgatcaatggtgccatcttcatattcaatccacgcaccggacagctcttcctc
aagattattcacacgtcggtgtgggcgggccagaagcgtttgggccagttggccaaatgg
aagacggctgaggaggtagcagctctcatccgctcgctgcccgttgaggagcagcccaag
cagattattgtcacgcgcaagggcatgttggatccactcgaagtgcatttacttgatttc
cccaatattgtcatcaagggttcggagttgcagttgcccttccaggcatgtctcaaagtc
gagaaatttggtgatcttattctaaaggccaccgagccacaaatggtattgttcaatctc
tacgatgactggttgaagacaatatcctcgtatacagcgttcagtcgtctcattctgata
ctgcgtgccctgcatgtcaacactgagcgcaccaagatcatcttgaagcccgacaagacg
accataacggaagcacatcacatttggcccacgttaacggacgaggaatggatcaaggtg
gaggtgcagctgaaggatctcattctcgccgattatggcaagaagaacaatgtgaatgtt
gcctcgctgacacagtccgagatccgtgacattatactcggcatggagattagtgcacca
tccgcccagcgtcaacaaatcgctgaaatcgagaagcagaccaaggaacagaatcaactg
acggcaacaacgacgcgcacaacaaacaaacatggtgacgagattatcacctcgacaaca
tccaactacgagactcaaacattcagttccaagacggagtggcgcgtccgtgcaatttcc
gccactaatttgcatctacgcacgaatcacatttatgtgagctccgatgacatcaaggag
acgggctacacatacattctgcccaaaaatatattgaagaagttcgtcaccatatctgat
ctgcgcgcccagatcgctgggtatttgtatggtgtcagtccgccggataatccgcaggtg
aaggagatccgttgcattgtgatgccgccacaatggggcacccatcagacgatcaatttg
cccaatgctttacccacgcatcagtatctcaaggatatggagccactgggctggatacac
acgcaaccgaacgaattgccgcaattgtcgccgcaggacataacgacgcacgcgaagatt
atgcaagagaactccaactgggatggcgaaaagacaattgtcatcacatgctcgtttacg
cccggctcgtgttccctgactgcctacaagctgacaccatctggcttcgagtggggctcc
aagaacaccgacaagggcaacaatcctaaaggctatctgccgtcgcattatgagcgcgtc
cagatgctgttatccaataagttcctcggcttctttatggtgccggcgcagagcagttgg
aattataactttatgggtgtgcggcacgatccgaacatgaaatacgaactgcaattggcc
aatcctaaggaattttatcacgaactgcatcgcacatcgcatttcctgctcttctcaaat
ctcgaggatggcggcgatggcgccggcgctgatcgtgaggatgtttatgcataa
DBGET
integrated database retrieval system
