Drosophila grimshawi: 6560776
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Entry
6560776 CDS
T01061
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
dgr
Drosophila grimshawi
Pathway
dgr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6560776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6560776
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6560776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
CCDC24
Motif
Other DBs
NCBI-GeneID:
6560776
NCBI-ProteinID:
XP_001987449
UniProt:
B4J8F7
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MPAVEKCVIYDWKRLWQMVSGVHYETPRGTVREELLNVCSELQAGVLQFKPKSASNVQLA
ALLKEKKQEKLLAFTVRLQELLNLESAQCWEILCYYLTKEYRGSASLLTQLISNETNMMK
LLEDIRHYYSLERMIVLKILKNVLVFYKVPNHPYHNEYREVVDKLTLPRIVDSYLNQLDS
LINELPPRKLLAGESFHCTAILTNWSERNARETNEVLHILLLLSEHKPMDLGHIKRLFAT
IKQHSFGHLQNHLNKDNLYHKALIENITYSELVLLLKCLDFEQPGDNAKLIEQLVKDLHG
EITNMDHRPEHGPLLLTWMMLRLRGTNDADDASSLLRCRQLGKRAVELKCFVQLHAIVTH
AMFADDSLLSRIVRKTIYNQLSYLCDLFDGDGSCARYEGIYELLCELLSWPQLAKDFCTH
EEDGVRSLYNSLLENFPLQFTNLAKIAQALSKAGQGNYIKSQLESLPMLALLYDEHEHKV
KELNANEYELTSVMQPFPRIDYTLPAGTSCTAVQHTNGFYMHFRCSVNFFNALHHEINCL
LREKAQLHGDFESNERIKRVEAGLKYLELAVQRTKSVEGISAEMVHPTEMCIDLLSKFKS
VQCPPVGLLSNCLNVCTALLPLVDEEIFMRISNLDILPTTSNQSLHDYKLFASAAYFESR
FLGSVIDHVEKKKERYDFLLAYLSFLRTYTKLKRKRYLQVEIPGLVFLLRDVFPHLHTWH
FKSHLDKNKIYFEVLSLICDLFDIIGSSSDVKCEQRQLLLNVCVYSLLNLDNGLILLRFV
GVGNAYVQHTMELETNWMQQQPHGLMMLVRLSMRILMQVLCLKSHVYAADTLSPLEALIY
TQPKQRDTLRIIPTVCSYMSNIFDRWLPIVSCRLLKRIALEFNMSLLACLDMEADQIRLT
FIQKLPDELESDSIKIAILELVEACIGKQPGVTEAFFKVNYAHEKRSFFGKECTPSIGDS
IVTYMKEFLDALETEPLTVQQALPCKIMNIFHSLWKHNLQMLVNELLKQPKFWTKLCSSL
FAKSTAEPQVRVYTQLINIVSIEIYSTGMSQKDELRQVLTKFFERDSFQQWLNYVFDMPK
VPAVQSASDELPDWICCLQSFKDLIIILLKKQPKFLSIPDAQFKLLAKKCLTVLVDRANY
LEDMRPFIMLAELYIFILLQFKQAYTSSTEEEQELMDQLQQLMTRICACYEDLHVRAKEA
CLAIITKCAHLYSNLLIRDSSIALRFLNSVVSIICTELQSIEKSVNIEPQSPPLPVETTG
KLATTSNSLILCLNLLKAVATIFNNEGPVNWDLPFVSVRLFQRLLHCVSYTLPMHSKQVL
SVQLLDVLIVFAKSNCSSEFLHCDVGEYLWLKLLPPRELLQSRYEFNKASSDVWTIEQWW
PIYSRGIELVNIIYDKHKKCFLPQALQFVGIHEVYLVDSLLLGKQSLEPEAMQLIKAAIS
LIASLTEHHKEWAEDHSSSLFNIMNAVQNLMGHATSMFHQQRNLKCLLVGRRSQLKILCN
TDPIAIDNDIINACNDLTDIIIYCVKALQKFTPDLLDLLCCGYYEPHKWHPILDAKFSAP
KLNESSLTLTFGMVLNMVTIYVKALNMQNHEFNGAPLNVLPNVEFGAEVSSSEKTGNMSR
GQRSFTQSISAATCPSNELLSNMDGQLCLVALEHLLMLVASQSIFMIRSPDLEPRWKQIV
RRDISSELLSFHEFVRRKVIVDHRDSRCPWVRRKHGLLKFQQTDATRHGPGQPRSSSSTE
VVRRSSTTNNELRVNVVRRLHLQQHQHQPSPSGVTNPMAASTPRGMSTDVAEIPCAESRK
RLYSDVPSANELQHFPPSTETGYCELSQVQLVEEDYLQLMYALFGVISQTE
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtcgaaaagtgtgtcatctacgattggaagcgactgtggcaaatggtgtct
ggcgtacactatgagacgccaaggggaacagtgcgcgaggagctgctcaacgtttgctcc
gagctgcaagccggcgtgctgcagttcaagccaaaaagtgcctccaatgtgcagctggcc
gcgctgctaaaggagaagaaacaggagaaactgttggcatttacggtacgattgcaggag
ctgctcaacctggagtcggctcaatgctgggagatcttatgctattatctgaccaaggag
tatcgcggctctgccagcctcctaactcagctcatctcaaacgagacaaacatgatgaaa
ctgctcgaggacatcagacactattattcgctggagcgcatgattgtcctgaagatacta
aaaaatgtgctcgttttctacaaagtgcccaatcatccataccacaatgagtacagagag
gttgttgacaagctgacgctgccccgcattgtcgactcatatctcaatcaattggatagt
ctgattaatgagctgccgccgcggaagctgctggcaggtgaaagctttcactgcaccgca
attttgaccaactggtcggagcgcaatgcacgcgagacgaacgaagtgctacacattctt
ctgctgctcagcgagcataagcctatggatctgggacatatcaagcgactgtttgccacc
ataaagcagcactcgtttggacacctgcagaaccatctgaacaaggacaacctctatcac
aaagccctgatcgaaaatataacgtattcggagctggtgttgctattaaagtgtttggat
tttgagcagccgggcgataatgccaagctaatcgagcagctcgtcaaagatctgcacggc
gaaataacgaacatggatcatcgtcccgaacatggcccattgctgctgacatggatgatg
ctacggctgcgtggcaccaacgatgctgacgatgcgtcgagtctgctgcgctgccgccaa
ctaggcaaacgagccgtcgaactcaagtgctttgtgcaactccacgcgattgtcacgcat
gcgatgtttgccgatgacagtctgttgtcgcgcattgttcgcaaaaccatttacaatcag
ctgagctacttgtgcgatctctttgacggcgatggcagctgtgcccgctacgagggcatc
tatgagctgctttgtgagctgctctcctggccacaattggcaaaggatttttgcactcat
gaagaggatggcgtacgttcactgtacaattcgttgctggagaactttccattgcagttc
accaacttggccaagatagctcaggcgctcagcaaagcaggccaaggcaactatatcaaa
agccagttggaatcgctgccaatgctcgcattgctctatgacgagcatgagcacaaggtg
aaggagctgaacgcgaatgaatacgagttgaccagcgtaatgcagccatttccgcgcatc
gattatacactgcctgccggcaccagctgcaccgctgtgcaacatacaaacggcttctat
atgcatttccgctgcagtgtcaactttttcaatgcgctgcatcacgagatcaactgtttg
ctgcgcgagaaggcgcagcttcatggtgactttgaatccaatgagcgcataaagcgcgtc
gaggcgggtctcaagtatctggaattggctgtgcagcgcaccaagtccgtggagggcatc
agtgctgagatggtgcatcccacagagatgtgcatcgatctgttgagcaaatttaagagc
gtgcaatgcccaccagttggactgctctccaattgcctgaatgtctgcacggcgctgctg
cccctcgtcgacgaggagatcttcatgcgcatcagcaatctggacatattgcccacgacc
agcaatcagtcgctacacgactacaagctctttgccagcgctgcctacttcgagtcgcga
ttccttggctcggtcatcgaccatgtggagaagaagaaggaacgctacgattttctctta
gcctacttgagttttctgcgcacctacacaaagctgaagcgcaagcgatatcttcaagtg
gagataccaggattggtctttctgttgcgcgatgtatttcctcatctacacacgtggcac
ttcaagtcgcatctggacaagaataagatctacttcgaagtgctcagcctaatctgcgat
ctctttgatatcatcggcagcagcagcgatgtcaaatgcgaacagcgccagctgctgctc
aatgtgtgcgtctattctctgctcaatctggacaatggattaattttattgagatttgtt
ggcgttggcaatgcgtatgtgcagcacaccatggagctggagacgaactggatgcagcag
cagccacatggactcatgatgctcgtgcgcctctccatgagaatacttatgcaggtgctg
tgcctcaagagtcacgtgtatgccgccgacacactctcgccactggaggccctgatctac
acgcagcccaagcagcgagacacgttgcgcataatacccactgtgtgcagctatatgagt
aacatatttgatcgctggttgccaattgtttcgtgtcgactgctcaagcgcattgcgttg
gaattcaacatgtcgctgctggcctgcttggacatggaagcggatcaaatacgtttgaca
ttcatacagaaactgcccgatgagctggagagcgattcgattaagatagccatattggag
ctggtggaggcgtgcattggcaagcagccgggcgtcacggaggcattcttcaaggtgaac
tatgcgcacgagaagcgctccttcttcggcaaggagtgcacgcccagcattggcgatagc
atcgtgacctacatgaaagagtttctcgatgcgctggagacggaaccgctcaccgtacag
caggcactgccctgcaaaatcatgaacatctttcactcgctatggaagcacaatctgcaa
atgctggtcaatgagctgctcaagcagccaaaattctggacaaagctctgctcatcgctg
tttgctaaatccacggccgagccacaagtgcgcgtctacacgcagctcatcaacattgtc
tccattgagatctatagcacgggcatgagccaaaaggatgagctgcgtcaagtgttgacc
aagttctttgagcgcgactccttccagcagtggctgaactatgtcttcgatatgcccaaa
gtgccagcggtgcagagcgccagcgatgagctacccgactggatttgttgcctgcaatcg
tttaaggatctgattatcatactgctcaagaagcagcccaagtttctcagcatacccgat
gcacagtttaagctgcttgccaaaaagtgcctgacggtgctagtggatcgtgccaactac
ttggaggatatgcgtccctttatcatgctggcggagctctacatatttatactgctgcaa
ttcaagcaagcgtacactagcagcaccgaggaagagcaggagcttatggatcagctgcaa
cagcttatgacccgcatctgcgcctgctacgaggatctacatgtgcgtgccaaggaggcg
tgcctggccatcatcaccaagtgtgcgcatctctattcaaatctcctgatccgggactct
tccattgcgctgcgcttcctcaactctgtggtcagcattatctgcacggagctgcaaagt
atagagaaatcagtgaatatagaaccgcagtcgccaccgctgccggtggaaaccactggc
aagctagccaccacctcgaattcgctgatcttgtgcctcaatcttctcaaggcggtcgcg
accattttcaacaatgagggacctgtcaactgggatttgccatttgtgtctgtgcgcctg
ttccagcgtctgctgcactgcgtctcctacacgctacccatgcacagcaaacaggtgctc
agcgtccagctgctggacgtgctgattgtgttcgccaagagcaattgttccagcgaattt
ctgcactgcgatgtcggcgagtatctgtggctcaaactattgccgccgcgggagctactc
caatcccgatacgagttcaataaggccagcagcgatgtgtggaccatcgagcagtggtgg
cccatctattcgcgcggcattgagctggtcaacattatctatgacaagcacaaaaagtgc
ttcctgccgcaggccctacaatttgtgggcatacatgaggtgtatctggtggattcgctg
ctgctgggcaagcaatcgttggagccagaagccatgcagctaatcaaggcggccatctca
ctgatcgccagcttgacggagcatcacaaggagtgggcggaggatcacagctcctcgctc
ttcaacattatgaatgcggtgcagaatctaatgggccatgccacgtccatgttccatcag
cagcgcaacttgaagtgtctgctcgtcggacgacgctcccaattgaaaatactgtgcaac
acggatcccattgccatcgataatgacattatcaatgcctgcaacgacctcacggacatc
attatctactgtgtgaaggcgctgcaaaagtttacgccagatctgttggatttgttgtgc
tgtggctactatgagccacacaaatggcatcccatactggatgccaagttcagcgcgccc
aagctgaatgagagcagtttgacgctcacctttggcatggtcctaaacatggttaccatc
tatgtgaaggcgctcaacatgcaaaaccatgaatttaatggtgcaccgctcaatgttctg
cccaacgtggagtttggcgcggaggtgtcaagcagcgaaaaaaccggaaacatgagtcga
gggcagcgcagctttacgcaatccatatcggcagcgacgtgtccgtcgaacgagctgctc
tcgaatatggatggccagctgtgcctggtggcgctggagcatctgctgatgttggttgcc
tcgcagagcatttttatgatacgctcgccggatctggagccgcgctggaagcagattgtg
cgacgcgacattagtagtgagctgctcagctttcatgagtttgtgcggcgcaaggtgatt
gtggatcatcgggactcgcgttgtccgtgggtgcgacgcaagcatggactgctcaagttc
cagcaaacggatgcgacgcgtcatgggcccggccagccgcggagcagcagcagcacagaa
gtagtacgtcgtagcagcaccaccaataatgagctgcgggtgaatgttgtgcggcgactg
catctacaacagcatcagcatcaaccgagtcccagtggagtaaccaatcccatggctgcc
tctacgccacgtggcatgtccaccgacgtggcagaaataccatgtgccgagagcagaaaa
cgtttgtattcggatgtgccatcggccaacgagctacaacattttcccccctcgacggag
accggctactgtgagctatcgcaggtgcagctggtcgaggaggactatctgcagctgatg
tatgcgctgtttggcgtcatatcgcagactgagtaa
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integrated database retrieval system
