Drosophila grimshawi: 6560927
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Entry
6560927 CDS
T01061
Name
(RefSeq) helicase domino isoform X1
Organism
dgr
Drosophila grimshawi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Motif
Other DBs
NCBI-GeneID:
6560927
NCBI-ProteinID:
XP_032589990
LinkDB
All DBs
Position
Unknown
AA seq
3299 aa
AA seq
DB search
MNEGNSAGGGHEGLSPAPPAVSDRVTLLSTEKSVTTPKSTTTITAATDHNNKSATTTANT
QQQQQKTNKHQQQQLPSAQLPVPLSNLSTEATAAAATPAAASTTSSSSSNPSIKAEAGST
RPPQAKRPRLENNTETEGEGDDDASENHNSSIVGAVGSSNIVGSLLPASVVASSEIGDAD
LTALQDLNALRKRILQQKLQILRNLKERHLENVSEYFYLQNGGSMMDYPAWRKKTPTPQF
ISYSNANRIEQLTLEEKPSTSAAAAAVGQAHRTTTTQQQQSSSSDSVVSNSSCSGSSTAT
PATTTTTTGTTGIQLENSTQKSNTQSLLPAKSGSNAASATATATTTASSSPSCSGSITTI
TAAAATAISTGSGTLSTTSSLVDTSGNALPPEAEIKIPAVGATPVAVSTKLPAAVVQLTQ
QGGTPLVPCNSPVGSTSLRRPNSQQQNAATSGATATAAAAGAGATTASVASGTATPMPLY
TGGGNGITSAATASVGGLTPSTPGGGSSGNLLSPLANTCTPNSAQEFSFKAKQEVYVMQR
ISELQREGLWTERRLPKLQEPSRPKAHWDYLLDEMVWLAADFAQERKWKKNAAKKCAKMV
QKYFQDKANAAQRAEKAQELHLKRVASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQAL
DQHLSFIVDQTEKFSQQLAEGMNKNVAETPSLDSSRLTSPKRESDDEFKPESGSEDDEET
IAKAEEEAADVNEEVKALAKESEMDFDDFLNDLPPGYLENRDKLMLEEQSSTKGADSSVG
GDDSDDSEFQAKEASDDDENTISKQEEAEQEIDHQKEIDELEADNDLTVEQLLEKYKSGK
IDEQPSAKRRKIAVETSELDSDDDSTVVEDSTDDSDVEASDEEDEELSTIKTDTDLDEAE
QEGGLKSLLTDADGSSCGAAGAAAAGSKDNKDDMLKDAAALAESLQPKGNTLSSTNVVTP
VPFLLKHTLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGP
HLIVVPSSVMLNWEMEFKKWCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVV
QDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLM
HFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQM
PKKYEHVVMCRLSNRQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFEV
RPTISPFQMEGITFHTPRLVSNILEYDPFTQINLETVNMLLLHLEQTLTAYVSHKSRLLS
PPRKLIEEIDSAPQPPPRCPNGKYRFHIRVRSAELAQRIKLQAVRVGASPAMRLEGSKIV
PMRSLLPSGHVLKRVSGTINPINMALKPVIINSLMTTTAATGSNSSAGGALNMLSSSSSK
LMSSRSPISAPTPAKVAKTMQDGKPFFYLAPATNAGGAGARLTLTSKTAAAAAASTPVGG
STNVTSGNSAQLQQLSKEPIVKDLATHVKLTSQRQTNGKGQEEERSSSTPEVVEDPYRVQ
QLIQMRKEQRLASLKRMAVINRRRTDATPIYGADCRQTIERCMQSTRTLKHSTWQTRGYA
NCSIAMRQHNDNWSLNLLLKNYEQRCLELAPIFANFVIYVPSVCAPRIRRYVQNLSSTHW
QNERQIEETIAQTVSPKLTLLHPIISAMTTQFPDPRLIQYDCGKLQTMDRLLRQLKVDGH
RVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRS
GGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKA
NQKRMLSDMAIEGGNFTTTFFKSSTIKDLFTMDTAQAEQDDSQDKPDDKDKIIAAEVEPA
IEAEKQSLRAFEHALAAAEDEQDVQATKTAKAEAAADLAEFDENIPIADDANADAGGAVA
IELSKADLEMQNLVKQLSPIERYAMRFVEETGAAWTAEQLRAAEAELEQQKREWEANRLA
AMQKEEQLLKQETEAEELLTYSRKDASNQVWISRNSMEQMPMWCPPTPPQDNNDIYIDHS
LSFMYDLEPIPETELPPVYVRRELKRSRTDAGFDGSRRPNKMRREDNYVPPRSLFDRPTA
QLARLRRELKNQRFRGSFKPNSMIPGLKPQLPAKPMTEPEAMSEWCVSEEMAILHVLINL
QGLPCSLMLLSPGQTPNWDLVSELVNFCSKTYRSARQCRWRYETHIQPREEGKVVESPKK
QKKLKPTLRTEYMKSPLRYLRTTQLYASDNNASFYKVMRMRFDTIKTAYLKKAPPPKRQY
NAPSLMNPKHMEVLQEFGINNYDQPVSPMNIAVMKANKMREKQRSQMPPMQQQQQQQQHQ
QQQQQQQQPVQQQSVQQQQQQQQPVQQQQQQQQQQQQQQQMQQQQQVHQQQQQQLQQQQQ
QLPTVAAVQQTVDLMPTTTATTVSVPAGNTGQLQQLQIQHLTSANVATTQQTAILLHQPQ
QQQQLRTQTTTQQLVKTIVGTTANLTAGQLHQLAQQSSANAGGTVQLQAAPPGSQSSVSV
VLTTPVQSLPIATHSNVNANSTAQIVSISSQSTLPVNTPPQLGSIVQTQTLPQVVSVGPL
TTTTSGGQQQQQQQTATGTVTMLRGQRLVSAAAASAAGNTTLHDVVLQQRTTAIGQPIVS
LGQSVANAHFQAQLRLSAVSGSPATQTTQLVTTKGIPVTALQQTGKTVLPGTQQQTPHIQ
LYRQRNLKVLQAPQVAQGGVVGGGTANLNPTVVQTAGGALATGTIIQASNLMQTPTHVTS
QKVAVSGMPGATTVQAGNVVSSVQMHGQARTQFIKQMAVGKQGVQRQMITTDGSGGSGAT
GDMLLVKRHNILAAQKAQQATGPLFTTTTSSSSVVAQQQQQQQQQQQQQQQLPVAGVVQQ
QTQQVTQQQIASLVKASTAAAASGSSVSAGGVTVSATGPPTVQAGSVNMTLPQLKPGSQI
KVTMPNQMRHLQMQQQLGMPRKISRMTQLVSASGQNTAANIVTTTTGPGQQQQTVAGGVT
LSAAAQQQQQQQQQQKTTAGGGSLQAQLLHIQNTKAVTVQQLQQVVRSGQPAGLVLGKTS
VGRVIPVSVASQATQRQTIQVVSAASAQALAAGNLRTGQNIASALKVATSGGGQTTQQTL
IAALQHTQRQNASPVRLQTTAGGNLLAVVQQQQQQQQQQQQQQQQQQQHTNIAGPTAGPA
EVMTITQTTATLPTVASLQQQQQQQQQQQVGVVQQQQQPTTQQVRTLVKKKIMIRSEKE
NT seq
9900 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaggtaattcagcaggaggggggcatgaagggctaagcccggcccctcctgct
gtgtcagaccgtgtaacgttactatcaacggaaaaatcagttacaacgccaaaatcaaca
acaacaataacagcagccacagatcacaacaataaatcagcaacaacaacagccaacacg
caacagcagcagcagaaaaccaacaaacaccaacagcagcagctgcccagtgcgcagctg
cctgtgccgctgtcgaacttgtcgacagaggcaacggcagcggcagcaacgccagcagct
gcttccaccacatcatcatcatcatccaatccatcaataaaagcagaagctgggtccacg
aggccgccacaggccaagcgcccgcgtctagaaaacaacacggaaactgaaggtgaagga
gacgacgacgccagcgaaaaccacaatagcagcatagttggtgcagttggtagcagcaat
attgttggctcattgctgccggcgtcagttgtggccagcagcgagattggtgacgccgat
ttaacggcactgcaagacttgaatgcgctcaggaagcgcatactacaacagaaattgcaa
attttgcgtaatcttaaggaaagacatcttgaaaatgtgtccgaatacttttatttacaa
aacggtggcagtatgatggactaccccgcgtggcgtaaaaagacaccaacaccacaattc
atcagctatagcaatgcgaatcgtatcgagcagctgacactcgaggaaaagccaagcaca
tcagcagcagcagcagctgtgggccaagcacacagaacaacaacaacgcaacagcagcag
tcatcatcatcggattcagtagttagtaatagcagctgcagtggcagcagcactgcaaca
ccagcaacaacaactactactacagggacaacaggcatacagttagaaaatagcacacaa
aaatcgaatacgcaatctctgttgccagccaagtctggcagcaacgcagcctctgcaaca
gcgactgcaacaacaacagcatcatcaagtcccagctgtagtggatctataacaacaata
acagcagcagcggcgacagcaatatccactggatctggaacattgtccacaacgagcagc
ttagtggatacaagtggtaatgcattgccaccggaagcagagataaagataccggcagtt
ggtgcgacgccagttgccgtctccacaaagttacccgccgctgtggtacagttgacgcag
caaggtggcacgccgctggtgccctgcaatagccccgtgggctcaacgtcgttgcgtcgc
ccaaactcacaacagcagaatgctgcgacgagcggagcaactgcaactgcagctgctgcg
ggtgcgggtgcaaccacagcatcggtggcaagtggcactgcaacaccaatgccgctgtac
actggcggtggaaacggtattacttcggctgcgactgcgagcgttggtggcctgacgccc
agcacgcctggcggcggcagcagtggaaatttattgagtccacttgcaaacacttgcacg
ccaaacagtgcgcaggagttttcgtttaaggccaaacaggaggtgtacgtaatgcagcgt
atatctgaactacagcgagagggattatggactgaacggcgtttgcccaagttacaggag
cccagtcgccccaaggcgcactgggactatctgttggacgagatggtctggctggcagct
gattttgcacaggagcgcaaatggaaaaagaacgcggccaagaaatgcgccaaaatggtg
caaaagtatttccaggacaaggccaatgcggcgcagcgtgccgagaaagctcaagagttg
catctaaaacgtgtcgcctccttcatagctcgcgaggtgaaaagcttctggtcaaatgtg
gagaaactggtcgagtataagcatcaaaccaaaatcgaggagaaacgcaaacaggcgctc
gatcaacatctcagctttatagtcgatcagacggagaagttctcgcagcaactggccgag
ggcatgaacaagaatgtggccgaaacgcccagcttagactcgagtcgccttacatcaccc
aaacgggagtcagatgatgagtttaagccagagtcaggctcagaggatgacgaggagacg
attgccaaggccgaggaggaggcagccgatgtcaatgaggaggtcaaagcgttggccaaa
gaatccgaaatggactttgatgattttctcaatgatttgccacctggctacttggagaat
cgtgataagctgatgctcgaggagcagagctcaacgaaaggcgctgattcctctgttggt
ggtgacgacagcgatgatagcgaatttcaggccaaggaagccagcgatgatgatgagaac
accatcagtaaacaggaggaggcggagcaggaaattgatcatcaaaaggagatagatgaa
ctggaggcagacaatgatttgaccgttgagcagctcctggagaaatacaaatctggtaaa
attgatgaacaacctagtgcaaagaggcgaaaaatagcggtggagacctcggagctggac
tcggatgatgattcaacagtggttgaggattcaaccgatgacagcgatgtggaagccagc
gacgaagaggatgaggaactctctaccatcaagactgatactgacctggacgaggcagaa
caggagggtggcctaaagagcctgctaaccgatgccgatggttccagctgtggagctgcg
ggcgctgctgctgcaggcagcaaagacaacaaggacgacatgttgaaggatgcggcggca
ttagccgaaagtctgcagcccaaaggcaacacgctgtcctcaacgaatgtggtgacacct
gtgcccttcctgctgaagcatacgctgcgtgagtatcagcacatcggtctcgattggctg
gtcacgatgaacgagcgcaaactaaacggcatccttgccgacgagatgggcctgggcaag
actatacaaacgatagcgttgctggcgcacttggcctgcgctaagggcaactggggtcca
catttgattgtggtaccctcatctgtgatgcttaactgggagatggaattcaagaaatgg
tgccccggcttcaagatcctcacctactatggcacacagaaggagcgcaagctcaagcgc
gtcggctggacaaaaccaaatgcgtttcacgtctgcatcacctcctacaagctggttgtt
caggatcagcaaagttttcgtcgaaaaaaatggaaatatctcatcctagacgaggcccaa
aacattaaaaacttcaagtcacagcgttggcagctgctactcaacttttccaccgaaaga
cgtttactattaactggaacgccgctgcagaacgatctgatggagctctggtcgctgatg
cacttcctcatgccgtatgtgttctcctcgcatcgcgagtttaaggagtggttctcaaat
ccaatgactggtatgatcgaaggcaacatggagtacaatgaaacgttaataacgcgctta
cataaggtcattcgtccatttttgctgcgacgccttaaaaaggaggtggagaagcagatg
ccaaagaaatacgagcatgttgtcatgtgccgcttgtccaatcgtcagcgttatctgtac
gaagatttcatgagccgttccaaaacccgcgaaacattgcaaaccggtaatttgctgagc
gtgatcaatgtgctgatgcagttgcgcaaggtgtgcaatcatccaaatatgtttgaggtg
cgtccaacgatatcaccgtttcaaatggagggaattacatttcacacgccgcgactggtc
agcaacatcctggagtatgatccgttcacgcaaattaatttggagactgtgaacatgctg
ctgttgcatctggagcaaacgctgaccgcctacgtctcgcataagtcgcgtctgctgtcg
ccgccacgcaaattgatcgaggagatcgacagtgcaccacaaccgccgccgcgctgcccg
aatggcaaatatcgttttcacatacgcgtgcggagcgctgagctggcgcagcggattaag
ctgcaggcggtgcgtgtgggcgccagtccggccatgcggctggaaggcagcaaaattgtg
cccatgcgcagcctgttgcccagtggccatgtactgaaacgtgtcagcggtaccatcaat
cccattaacatggccctcaagccagtgattatcaatagccttatgacaacgacggcagcg
actggcagcaacagcagtgcaggtggtgcattaaatatgctgagcagcagcagctccaag
ctgatgagctcacgctcaccaattagcgcgccaacgccagccaaggtggccaagacaatg
caggatggtaaaccattcttctatctggcgccagcaacaaatgccggtggcgctggagcg
cgactcacgctaaccagcaaaacagcagcggcggcggcggcgagtacacctgtaggagga
tccacaaacgtaacgagtgggaattcagcacagctgcagcagttgagcaaggagcctatt
gtcaaggatctggccacgcatgtcaagttgacgtcacaaaggcaaacgaatggcaagggc
caggaggaggagaggtcatcgtcaacgcccgaggtagtcgaggatccgtatcgagtgcag
cagctcattcaaatgcgcaaggagcagcgtttggcatcgctcaaaaggatggctgtcatc
aatcgcagacgcaccgatgccacgcccatttatggcgccgattgccgacagacgattgag
cgttgcatgcagtccacgcgcaccctgaagcattccacatggcaaacgcgtggctatgcg
aactgttcgattgcgatgcggcagcacaacgacaactggtccctgaatctcctgctaaag
aactatgagcagcgctgcctcgaactggcgcccatctttgccaattttgtgatttatgtg
ccgtcggtgtgtgcgccacgaattcgtcgctatgtgcagaacttatcgtcgacgcattgg
cagaatgaacggcagattgaggagacgattgcgcagaccgtgtcgcccaagctgacgctg
ctgcatccgattatctcggcgatgacgacgcagtttcccgatccgcgtctcatccaatac
gattgcggtaagctgcagacaatggatcgtctattgcgacagctgaaggttgacgggcat
cgtgtgctgatcttcacccaaatgaccaaaatgctggacgtactggaggcattcctcaat
tatcacggacacatttacctgcgactggatggctcgacgcgtgtcgagcagcgacaaata
ctcatggaacgtttcaatggggacaagcgcatcttttgcttcattctatcgacacggtct
ggcggcgtgggcatcaatttgaccggcgctgatactgtgatcttctatgactcggactgg
aatccaacgatggacgcgcaggcgcaggatcggtgccatcgcattgggcaaacgcgagat
gtgcacatatatcgattggtctcagagaaaaccattgaggtgaacatactgaagaaggcc
aaccagaagcggatgctcagtgatatggccatcgagggtggcaactttacgaccaccttc
ttcaagagctccaccatcaaggatctgttcactatggatacggcacaggcagagcaggac
gatagtcaagataagccggatgataaggacaagattatcgcagctgaagttgagccggct
atcgaagcagagaagcaatcactgcgcgccttcgagcacgcactcgctgctgccgaggac
gagcaggatgtgcaagccacaaaaacggccaaggctgaggcagccgccgatctggccgag
ttcgatgagaacatacccattgcggatgatgccaatgcagatgcaggtggtgcggtggcc
attgagctcagcaaagccgatctggaaatgcaaaatcttgtcaagcagctctcgcccatt
gagcgatatgcgatgcgctttgtggaggagacgggagccgcgtggacagctgagcagctg
cgcgccgccgaggcggaactggagcagcagaaacgtgaatgggaggcgaatcggttggcg
gccatgcagaaggaggagcagctactcaagcaggaaacggaggcggaagagctgctcacc
tacagtcgcaaggatgccagcaatcaggtctggatatcgcgcaatagtatggaacaaatg
ccgatgtggtgcccgccaacgccgccgcaggataacaatgatatttacattgatcactcg
ctgtcgttcatgtacgatctggagccgatacccgaaacggaactgccgcccgtctatgtg
cgacgtgagctcaagcgatcccgcaccgatgccggcttcgatggcagtcgtcgtccgaat
aagatgcgacgcgaggataactatgtgccgccacgttcactgttcgatcgtccaacggcg
cagttggcgcggctgcggcgcgagctgaagaatcaacgtttccgaggcagttttaagccc
aattcgatgataccgggcctgaagccacagttgccggccaagccgatgaccgagccggag
gcgatgagcgagtggtgtgtgtctgaggaaatggctatactgcatgtgctgatcaatttg
caggggttgccgtgcagcctgatgctcctctcgcctggtcagacgcccaattgggatttg
gtctcggagctggtcaacttctgttcgaaaacgtatcgttcggcgaggcaatgtcgctgg
cgctacgagacgcacatccagccgcgcgaggaaggcaaagtggtggagagtcccaagaaa
caaaagaaactgaagcccacgttgcgcacggagtatatgaagagtccgttgcgctacttg
cgcaccacccagctctatgccagcgataacaatgcctccttctataaggtgatgcgcatg
cgcttcgacaccatcaagacggcctatttgaagaaggcgccgcctccaaagcgccagtac
aatgcgcccagtctgatgaatcccaagcatatggaggtgttgcaagagttcggcattaac
aactacgatcagcccgtatcgcccatgaatatagccgtgatgaaggcaaacaaaatgcgt
gaaaagcagcgcagccagatgccaccaatgcagcaacaacagcagcagcaacaacaccaa
caacaacaacagcagcagcagcagccagttcagcaacagtcagtgcagcagcaacagcag
cagcagcaaccagtgcaacagcagcaacagcaacaacagcagcagcaacaacaacaacaa
atgcagcaacaacagcaggtccatcagcaacagcaacaacagttgcagcagcaacagcag
caactgccaacagttgccgctgtgcagcaaacagttgatttaatgcccacaacaacagca
acaactgtttctgtacccgctggcaatacgggtcaactgcaacaattgcagatacaacat
ttgactagcgctaatgtggcgacaacgcagcaaacagcaatactgctgcatcagccacaa
cagcaacaacagctgcggacacagaccacaacacaacagcttgttaagaccattgtgggc
acgacagcaaatctgacagcgggccagctgcatcagctggcgcagcaaagttcagctaat
gcgggcggcacggtgcagttacaggcagcaccgccaggcagccagtccagtgttagtgtg
gtgctcaccacgccggtccaatcactgcccatcgccacgcacagcaatgtgaatgccaac
tcaacagcccaaatagtttccatatcgtcgcagtcgacgctgccagtgaatacgccaccg
cagttgggtagcattgtgcagacccaaacactgccgcaagttgtttccgttggaccgctg
accactacgaccagtggtggacaacaacagcagcagcagcagacggcaacgggcaccgtg
acgatgttgcgtggccagcgtctcgtttcggctgctgcagcatctgctgcgggtaatacg
acgctgcacgatgtggtgttgcagcagcgcaccacagccatcggtcaacccattgtctcc
ctagggcagagtgtggcaaatgcacattttcaagcacagttgcgtctgtctgccgtttct
ggctcacccgcaacacaaaccacccaattggtcaccactaagggtatacctgtcaccgca
ctgcagcagaccggcaaaacggtgctgcccggcactcagcagcagacgccgcacattcaa
ctgtatagacagcgcaatctgaaagtgttgcaggcacctcaagtggcacagggaggcgtc
gttggtggcggcacggctaatctgaatccgactgtggtgcaaacggctggcggcgcttta
gccaccggcactataatccaagcgagcaatctcatgcagacacccacgcatgtgaccagc
cagaaagtggcggtctctggcatgccgggcgccaccaccgtgcaggcgggcaatgtggtt
agctcggttcaaatgcatggccaggcacggacgcagttcatcaagcaaatggcagtcgga
aagcagggagtgcagcgccagatgatcaccactgatggcagcggcggcagtggtgcaact
ggtgatatgctgctggtcaagcgacacaacatactggccgctcagaaagcacagcaggcc
actgggccgctgtttaccacaaccaccagtagcagcagcgttgtcgcccagcagcaacaa
caacagcagcagcagcaacaacaacaacaacagttgcctgttgctggtgttgtgcaacaa
cagacgcaacaggtaacccagcaacagattgcctcgctcgttaaggcgtccacggcggca
gcagccagtggcagcagcgttagcgccggtggcgtgacagtgtcagcgacgggtccgccc
acagtgcaggcgggcagcgtgaacatgacactgccacaactcaagccgggcagtcagatt
aaggtgacgatgccaaatcaaatgcgacacctgcaaatgcaacaacagctgggaatgccg
cggaaaatcagtcgcatgactcagctggtgagtgcgtctgggcagaacacggctgccaat
attgtgaccacaacgacaggacccggccagcagcaacagacggtggcaggcggtgttacc
ctttcggcggcagcacaacaacaacaacagcagcagcagcaacagaagacaacagctggt
ggtggcagtttgcaggcacaactgttgcatatacaaaacactaaagctgtaacagtgcaa
caattgcagcaagtggtgcgcagcggtcagccagcgggtcttgtgctaggcaagacaagt
gtcggacgtgtcatacccgtttcggtggcatcgcaggccacacagcgtcagaccatacag
gtggtttcggctgcttcggcacaggccttggctgctggcaatctacgaaccggtcagaac
atagccagcgccttgaaggtggccacctctggcggtggtcagaccacgcagcagacttta
attgcggcgctgcagcatactcaacggcaaaatgccagccccgtgcgactgcagaccaca
gccggtggcaacttgttagctgtggtgcagcaacagcagcagcagcagcagcagcagcaa
cagcaacaacaacagcaacaacaacacacaaacattgctggacccacagcgggaccggct
gaagtaatgacaataacacagacgacagcaacgctgccgactgttgccagtctgcagcaa
cagcagcagcaacaacagcagcagcaggttggagtcgtgcaacagcagcagcaaccaacg
acgcaacaggtacgaacgctggtgaagaaaaagatcatgatcagaagcgagaaagaataa
DBGET
integrated database retrieval system
