Drosophila grimshawi: 6561295
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Entry
6561295 CDS
T01061
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dgr
Drosophila grimshawi
Pathway
dgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6561295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6561295
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6561295
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6561295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6561295
NCBI-ProteinID:
XP_032590018
LinkDB
All DBs
Position
Unknown
AA seq
2543 aa
AA seq
DB search
MNVENQLKTPLTQIRNLVKHVNKRNFNENSEQIKQLIQDYGVDADRSCLRYLFTVLNLND
PTPNVNAQLQAKLLGAHLQRQLQCSSFVTNICIAFDQHFAKQKSLKPIGLAELIGQVAKH
TGINKLCECIFALAVTHSSHPELRQSARDSLRNSLPELLNSYLGQNAATAAAASGLHDIS
FDLLQYLLCCLGEYVTPQLEKQFLDKLREEFPRELVPLVLAPLLYRGATTTTAAKSSETD
AEEETTNSNTSSWSSSNADNLNEVGIEDIYDHLCEIIFTNQGKNNIMDTSWINLILEIGY
EFTSSIEECKNQLCCGSGSRELQPKDVAKIVGLMCRRHSSLLDCNVNLPTPANFWPGQGQ
QAGAGGSSSSSASQSAQQNTSNNNNDGNSESSSVASEKKDKKETTDATQTWKPDVFVQAV
KELVPQLNWKDVCMELDHPEFVLKDRIGLDLLLTILRLATQSNLFPQPECIYRHWANTEG
QLSLITTMLKNPDLFSFADYVFSQPGLDVLKTPPDAENKEIAAWKSLHLVEVLLSIADKG
YFSQVHELFKFPAQNCPDVLFLALLQINPPLTPLRQDLFNQLVPTFLGNHPNSNVILASG
WSSTNFQLRPTIMNAMSEWYLRGSEFDQVKLSRILDLAQDLKALSSLLNARSFLFIIDLA
CLASRREYLKLEKWLSDKIRDHGEPFMQAMIKVLQRRCPQVTNAKLPEDQLPPKQAQLLP
ETVTTMISCLQACINNCMQPEIVEMIMQMAANVTIMANKARAAQQQQQQQQQQQQAGGPQ
GLVPPPPSILRSHRGMDLPGPGIVPGSVPPPPQPQQPFSGNLNAQQMFGPGGMDPLTNMS
NNLAGLNLGGPNGAFNFGNMLNNLVSTPASPSRLMNPGANPYPPIPIQIPAPPPPNVGNL
GRMLPAGPQPTPTPPNPNNPVMTDLQMPVSKEVEDEANSYFQRIYNHQPNPTLSIDEVLD
ILQRFKESTNRREQEVFLCMLRNLFEEYRFFAHYPEKELQITAQLFGGIIDRNLVPTFVA
LGLSLRCVLDALRKPEGSKLYYFGVTALDRFKTRLHTYNKYCEHIRSIPHFTEFPQHLIQ
YVEFGMHGQEPPPQKLIGLSNTIPSSVIAQGGAEPLYRPNSMPGNMAAAQNVQKPPVAVS
HATRMKSIANATNIDTLLVANQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCEEIKEIM
TKEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNIEINRYVTKETLRNIKVLLRSDKG
VINFSDRSLLKNLGHWLGMMTLGRNRPILQMDLDLKSLLAEAYHKGQQELLFVVPFVAKI
LESSAKSRVFKSPNPWTMSIMFVLGELHQEPDLKLNLKFEIEVLCKTLNLELEKLRPVIY
LKCPTRALLIEQQMSQPKPKATEPPPQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQVQ
QQQQVQQQQQQQQQQQQQAPPPPPSAEVDPQAIMMNNNANAPGGSVSSPNLPTDPSQVVL
PPPEPRYSYVEVNVNNFQLIAQQLVLPANIPFLHANPGIKHIVVNAIERTITDWLQPVVD
RSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLH
KAFMAALTGVPSMSEIQAASIQLANENVELVCAFIQKTSAEKSALEIDRRLSTDFETRKI
AREEGSRFVDAQILSYQQERLPEPVRLKVGPVPPTLYAVYSEFARSIPGFQQMSDRDIAL
FVPKPQDIQVPNVFANDDSAMVYAEVANKMEAFMNTAINVPTLQLQANKMHVLLNALMAT
RRLRDQESAFIMLTRAVEGLTEGLINVQDHMEQMKLYRDIHLRILSLLHNSFGAPNTERA
VTKCFFELREEVRYNVEAARALITSHFVNLNQFDGMLRDCMDNGNNYVAISFGIALLERL
IMEDRAINIVSDNEFMATVELLGRLTQHRQRYPECIVNAIETLWSGNLNTSDYGSFNPGE
RYLAGASHYIHSGMHHVRSCDTDDPPGLQEKTEFLLKDWVALYTQQNQQTTRDARNFGTF
VQKMNTYGILKTDDLITRFFRQATHICTDVVYRMFAELSMPINQVKNKIFQWIDAFVHLI
AMLVRHSGEGGNPTTKINLLNKVLGIVLGTLLKDHELRGVAFQQVGYHRFFMMLFMELCS
ADGLPEPLMHSIVSAFAYTYHLLSPTVAPGFCFAWLELISHRVFLGRILVLIPGQKGWPL
YAQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPP
NCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVCSSYIMNIQPPNFKKDLDS
YLKARAPVTFLSELRGHLQVTSEPGTRYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNI
AHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQE
QITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARSCLA
KSNVTQPLNMAVDGTDSQEVNIN
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgagaaccaattgaaaacaccgctaacgcagatacgtaatttggtcaaacac
gtgaacaaacgaaattttaatgagaacagcgagcaaataaagcagctcatccaagattac
ggcgtcgacgcggatcgcagctgcttgcgctatctgttcacggtactcaacttgaacgat
ccgacaccgaacgtcaacgcgcagctgcaggcgaagctcctgggcgcccacttgcagcgc
caattgcagtgctcctcgtttgtgaccaacatatgcattgccttcgatcagcactttgcc
aaacaaaagagtctgaagcccattggtcttgccgagctcattggacaggtagccaagcat
accggcattaacaaactttgcgagtgcatctttgcgctagcggtgacccacagttctcat
cccgaactccgacagagcgcgagggatagtctccgaaactccttgcccgagctgctcaat
tcgtatttgggccaaaacgctgccacagcagctgctgcgagcggcttacacgatatctcc
tttgatttactgcagtatttgctgtgctgtttgggcgagtacgtaacgccacagctggaa
aagcagttcttggacaagttacgcgaggagtttccacgagagttggtgccattggttcta
gcgccgttattatatcggggcgcaacgacgacaacggcagccaaatccagcgaaactgat
gcagaggaggaaacgacgaattcgaacaccagcagctggagcagctcaaatgcagataat
ctgaatgaagttggcattgaggatatctatgaccatttatgcgagataatatttacaaat
cagggcaaaaataatattatggacacatcttggattaatttaatccttgaaatcggttat
gaatttacatcgagcattgaagagtgcaagaatcagttgtgttgcggcagcggctcccgt
gaattgcagccaaaagatgttgccaaaatcgttggactcatgtgccggcgccactcgtcg
ctgcttgattgcaatgtaaatctaccgacaccagccaatttctggccgggccaggggcag
caggctggtgcaggtggcagcagcagctcctccgcttcccagtcggcgcaacagaacacc
agcaataacaataacgatggcaacagcgaatccagcagcgttgccagcgagaagaaggac
aaaaaggaaacgacggatgcgacacaaacatggaagccagacgtgttcgtccaggcggtc
aaggagctggtgccacagctcaactggaaggatgtctgcatggaactcgatcatccagag
tttgtgctgaaggatcgcatcggtttagatcttctgctgactatcctgagattggccaca
cagtcaaatctgtttccgcaaccggaatgcatttaccgccactgggcgaacacggagggt
caattgtcgctgataacaaccatgctgaagaatcccgatcttttctcatttgccgactat
gtcttcagtcagccggggctggatgtgctgaaaactccgcccgatgctgagaataaggag
atcgctgcctggaagtccctacatctggttgaggtgcttctatcgatagcggacaagggc
tactttagtcaggtgcacgaactcttcaagttcccggcgcaaaactgtccggatgtactg
tttctggctctgttgcaaataaatccgccgttaacgccactgcgccaggatctgttcaat
cagctcgtgcccacgttcctgggcaatcatcccaattcgaatgtgattctggccagcggc
tggagctccaccaacttccaattgcggccgaccataatgaacgccatgtccgaatggtat
ttgcgtggcagcgaattcgatcaggtgaagctctcacgaatcctggacttggcccaagat
ttgaaagcgctctcctcgctgctcaatgcgcgctcctttctgttcatcatcgatctggcc
tgtttggcctcgcgacgcgaatacttgaagctggagaagtggctgagcgataagatacgc
gaccatggcgagcccttcatgcaggccatgatcaaggtgctgcagcgccgctgtccgcag
gtgaccaacgccaagctacccgaggatcagctgccgcccaagcaggcacagcttctgccc
gagaccgtgaccacaatgatcagttgcctgcaggcgtgcatcaacaactgcatgcagccc
gaaattgtcgaaatgattatgcaaatggccgccaatgtaactatcatggcaaacaaggcg
cgcgctgcccagcaacagcagcagcagcaacaacaacagcagcaggcaggtggtccgcag
ggacttgtgccaccaccgccgagcattttgcgtagtcatcgaggcatggatttgccgggg
ccgggcattgtgcccggctcggtgccaccgccgccgcaaccgcagcaacctttctcaggc
aacctgaacgcacagcaaatgtttggaccgggcggcatggatccgctgaccaacatgtct
aacaatctagctggcctcaatctgggcggccccaatggcgccttcaactttggcaacatg
ctgaacaacttggtttctactccagcatctccgtcgcgtttaatgaatcccggcgccaac
ccctatccgcccattccaatacaaatcccagcgccaccgccaccgaatgtgggcaatctc
ggccgtatgctgccagctgggccgcagccgacgccaacaccgccaaatccgaacaatccg
gtgatgaccgatctacagatgcccgtttccaaggaggtggaggatgaggcgaactcatac
tttcagcgcatctacaatcaccaaccgaatccgacgctctcgatcgatgaggttctcgac
atactgcaacgctttaaggagtcgaccaatcgccgcgaacaggaggtattcctgtgcatg
ctgcgcaatctgttcgaggagtatcgcttcttcgcccactatcccgagaaggagctgcaa
ataaccgcacaactctttggcggcatcatcgatcgcaatctcgtgccgacctttgttgca
ttgggattgtcactgcgctgcgtgctggatgcactgcgcaaaccggagggctccaagctc
tactatttcggtgtgacagccctggatcggttcaagacccgtctgcacacctacaacaaa
tactgcgagcacattcgctccataccgcactttaccgaatttccgcagcatctgatccaa
tacgtggagttcggcatgcatggacaggagccgccgccacagaaactaattgggctgagc
aacaccataccctcatcggtaatcgcccagggcggagcggaaccgctctaccgtcccaat
tcaatgcctggcaacatggctgcagcacagaatgtgcagaagccgccggttgcagtgtcg
catgctacgcgtatgaaatcgattgcgaatgcgaccaatattgatacgttgctggtggcc
aatcaggaggagaaggtcacagtgccgccggaacccgtgcaggacaagaccgctttcata
ttcaacaatctcagccagctgaatataccacagaaatgcgaggagatcaaggagatcatg
accaaagagtattggccctggctggcgcagtatttagtactcaagcgcgcctccatggag
tttaattttcatacgctctactacaactttctcgacgcactcaagaacatcgagatcaat
cgatatgtgaccaaggagacgttgcgcaatattaaagtactgctgcgctccgacaagggc
gtcatcaatttctcggatcgcagtttgctcaagaatctcggccattggctgggcatgatg
accctgggtcgcaatcgacccattctacagatggacctggacctcaaatcactgctggcc
gaggcctatcacaagggtcagcaggaactgttgtttgtggtgccatttgtggccaaaatt
ctggagtcatcggccaaatcgcgcgtcttcaaatccccaaacccctggacaatgtctatt
atgtttgtgctgggtgaactgcatcaggagccggatctcaagctcaacctcaaattcgaa
attgaagtgctgtgcaaaacgctcaatctggagctagagaagctccgaccggtcatttat
ctgaagtgtccgacgcgtgctctgctcatcgagcagcaaatgtcgcaaccaaagcccaag
gcgacggagccaccaccccaacagcagcagcagcagcaacaacatcagcaacaacaacag
cagcagcagcaacaacagcagcaacagcaacaacagcagcagcagcaacaacaagtacaa
caacagcaacaagtacaacaacaacagcagcaacaacaacaacagcagcaacaggcacca
ccgccgccaccatccgctgaggtggatccacaggccataatgatgaacaacaatgcgaat
gcgcccggtggttccgtctcctcgcccaatttgccaaccgatcccagccaggtggttttg
ccaccgcccgagccacgttactcctacgtcgaggtgaatgtgaacaatttccaattgatc
gcccagcagctggtactgccagccaatataccgttcctgcacgccaatccgggcatcaag
cacatcgtcgtgaatgccatcgagcgcacaatcaccgattggctgcagccggttgtggat
cgcagtatacgcattgcgtgcgccaccaccgagcagataatacgcaaagatttcgccctg
gatgcggatgagaatcgcatgcgcaccgccgcccatcaaatggtgcgtaatctggcagct
ggcatggccatgatcaccggcaaggatgagattgcgcgcgcaatcagtcagaatctgcac
aaagcattcatggccgcgctgactggtgtgccaagcatgtccgagatacaggccgcctcc
atacaactggccaatgagaatgtggagctcgtctgcgccttcatccagaagacatccgcc
gagaagtcggcgctcgaaatcgatcgtcggctatcgacagattttgagacgagaaaaatt
gcacgggaggagggcagccgttttgtggatgcccaaatcctgagctatcagcaggagcgt
ctgcctgagccagtgcgtctcaaggtgggcccagtgccgcccacactgtacgccgtctat
tcagagtttgcgcgcagcattcccggcttccagcagatgagcgatcgcgatattgcactg
tttgtgcctaagccacaggatatccaggtgccgaatgtgtttgccaacgatgacagcgcc
atggtctatgccgaggttgccaacaaaatggaggcgttcatgaataccgccatcaatgtg
ccgacactgcagctgcaggccaacaagatgcacgtgctcctcaatgcactgatggccaca
cgacgtctacgcgatcaggaatcggcatttataatgctaacacgggccgttgagggccta
accgagggcctcatcaacgtccaggatcacatggaacagatgaaactctatcgtgacatt
cacttgcgcatcctcagcctgttgcacaacagcttcggtgcaccgaacacggagcgtgcg
gtgaccaaatgcttcttcgaattgcgcgaagaggtgcgctacaatgtggaagcggcacgc
gccttgatcacatcgcactttgtcaatctcaatcagttcgatggcatgctgcgcgactgc
atggacaatggcaacaactatgtggccatctcgtttggcattgcgctgctcgagcgtctc
atcatggaggatcgggcgattaacattgtctccgacaatgagtttatggccaccgttgag
ctgctcggccggctcacacagcatcgtcagcggtatcccgagtgcattgtcaatgcaatt
gagactctgtggtcgggcaatctgaacaccagcgattatggctcattcaatccgggcgag
cgatatctggcgggcgcatcccactacattcactccggcatgcatcatgtgaggtcatgc
gacacggatgatccgcctggtctgcaagagaagacagaattcctgctgaaggactgggtc
gcactctacacacagcagaatcagcagacgacacgcgatgcccgtaatttcggtaccttt
gtgcaaaagatgaacacctacggcatactgaagacggacgatttgattacacgcttcttc
cggcaggcgacgcacatctgcacggatgtcgtctatcgcatgtttgccgagctgagcatg
ccaattaatcaggtgaagaacaagatattccaatggattgatgcgtttgtgcatttgatt
gcgatgctggtgcggcattcgggcgaaggtggcaatcctacgaccaagattaatctgctc
aacaaggtgctgggcattgtgctgggcacgctgctcaaggatcacgagttacgtggcgtt
gccttccagcaggtgggctatcatcgcttcttcatgatgctcttcatggagctgtgctcc
gctgacggtctgcccgagccgctgatgcacagcatcgtgtcggcgtttgcctacacatat
catctgctcagtccgactgtggcgcccggtttctgtttcgcctggctggagttaatctcc
catcgcgtcttccttggccgcattctggtgctgatacccggccagaagggctggcccctc
tacgcccagctgttgcaggatctcttcaaatatctcgcaccattcttgcgcaacaccgaa
ctgggcaagcccgtccagctgctctacaagggcacgctgcgcgtactcctcgtcctgctg
cacgattttcccgaattcctgtgcgactatcatttcggtttctgtgacaccataccgccc
aattgcgtccagatgcgcaacattatactgtcagcgtttccgcgtaatatgcgcctgccc
gatccgtttacgcccaatctgaaggtggacatgctctccgatagcagcaatgcgcccaag
gtgtgcagcagctacatcatgaacatccagccgcccaacttcaaaaaggatctcgactcg
tacttgaaggcccgcgcccccgtcacattcctgtcggagctgcgcggccatctacaagtg
accagtgagccgggcacacgctacaatatgaccctcatgaacgccctggtcatgtacgtg
ggcacccaggccatagccctgatcagaaacaagaactttgtgccgaacacatcgaacatt
gcgcacagcgctcacatggatatattccagaacttggccgtggatctggacaccgagggt
cgctatctgttcctcaatgccattgccaatcagttgcgctatccgaacagtcacacgcac
tacttcagctgtgcggtgctccatctgtttgccgaggccaattcggaggctatccaagaa
caaatcacacgtgtgctgctcgagcgcctgatcgtgaatcgcccgcatccatggggcctc
ctcatcacattcattgagctgatcaagaatcccatttacaagttctgggatcatgatttc
gttcattgtgcaccagagattaccaagctctttgaatccgtcgcacgctcctgcctggcc
aagtcaaatgtcacccaaccgctgaacatggccgtcgatggaaccgatagccaggaggtc
aacatcaactga
DBGET
integrated database retrieval system
