Entry |
|
Name |
(RefSeq) collagen alpha-1(IV) chain
|
KO |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dgr00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6561570
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6561570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:dgr04147]
6561570
00536 Glycosaminoglycan binding proteins [BR:dgr00536]
6561570
Exosome [BR:dgr04147]
Exosomal proteins
Exosomal proteins of other cancer cells
6561570
Glycosaminoglycan binding proteins [BR:dgr00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
6561570
|
SSDB |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1771 aa
MLPHWKRLLFAAVFAGAVFSTNAQFWKQSGTSGSIYENVRQRDDSRVAYSMDESYDIVDS
AKNCTAGRGCVPKCIAEKGNRGLPGPEGPIGITGLKGYAGPEGPPGDKGQKGDPGPYGAR
GDKGESGMPGVPGMPGLRGLSGTPGTPGNPGTSGKDGCEGKQGLLGVPGLDGMPGPRGFP
GGPGIKGEKGDPAKENGDYAKGEKGDPGHAGRPGPAGPEGERGEKGERGDSGPYGPPGLR
GDRGIKGDKGAACFAIPLAGKQGEKGEKGDPAPRLPAHGTDTVVGQRGDVGQKGEMGPMG
LKGGLGPAGEPGHDGRKGEKGLPGGAGERGRQGNFGPPGPLGQKGDRGENGLNGLPGQSG
VKGEPGRDGKPGDRGLVGPQGPPGGGRGQPGPSGPKGPRGYAGQPGPKGLDGMDGPQGQK
GYMGPKGGPGLAGNPGNEGPPGQKGEKGNAGRLGPSGPKGPIGHNGPPGPEGQNGEDGMP
GHGIQGPKGDDGQPGSPGQKGSKGERGFMGERGVPGDSKLGRPGIPGRAGSPGQKGEDGR
PGNHGEKGDMGPKGDVGGKCSLCPPGLKGDKGEHGVPGMPGNPGERGPTGERGYQGDRGE
DGITGLDGPQGMKGEEGYPGVPGSMGPKGDSCLEDLSLIKPERGQKGEQGYPGASGVKGE
PGENGNNGAPGLKGEMGVKGDMGYAGQPGNDGAPGSDGLRGFNGVDGISIKGEPGRAGYD
GIKGDKGSTGYSGLKGEPGTCAASELKVPLKGNKGERGNTGMPGPSGEMGQKGEHGLPGE
KGAMGPQGPVGNVGPRGLTGQRGDKGNPGQYGTPGSDGKDGVRGPPGRNGERGQKGEQGI
TVAGPRGPQGRDGLIGEKGDRGVVGATGRVGPDGNPGYPGEKGDAGSAGSPGRTGLVGAK
GEPGPVGPEGRPGPPGSPGIDGVQGRDGAKGEVGMPGLVGMPGIKGERGAPGNDGQKGFT
GPAGGMGQRGPLGSAGIPGMKGDKGERGLTGNDGLTGARGAPGPPGIRGFKGDTGPQGQP
GQNGSDGYMGEKGDQGLPGFEGPQGEPGDASEKGEKGEPGLSGLRGQDGPVGLPGMIGEK
GLAALPIHGRPGAPGEKGNAGRDGLDGQNGRPGEKGDAGFPGASGPKGDKGIAGQPGLTG
GPGNDGQPGPQGSRGATGYAGPKGNKGERGLAGAAGAKGVMGLTGRQGYPGETGAKGDKG
ERGPRGPATQVNMLDLRGEKGIRGSDGLPGRPGLQGIKGNQGPVGYPGEKGEHGLTGPSG
IAGLPGLPGSKGDMGLHGEPGAPGPIVKGEKGLPGRNGKSGREGATGPRGMKGDRGLPGL
AGNAGLVGLPGPIGPTGMKGERGMTGTPGIDGSAGFNGVPGLKGEAGFPGLKGERGVAGF
EGQKGDKGDRGMAGAPGRIGLTGLKGNMGMPGMDGQPGRPGPVGEKGLAGLKGRDGYNGQ
PGARGIKGEPGLLSPPGPKGEPGNPGHNGQKGEIGPPGATGLIGIQGERGEKGERGAIGL
SGAVGHPGIKGERGEQGQKGYAGAVGAIGYKGEPGQSYSGAQDYLTGILVTRHSQSVQVP
QCAAGHIELWTGYSLLYVDGNDYSHNQDLGQPGSCVQHFSTLPVLSCGQNNVCNYASRND
RSFWLSTSASIPMMPVNDNEIRKYISRCVVCEAPANVIAVHSQSQAIPDCPNGWESLWFG
YSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGHCHFYETMTSFWMVTLEDG
DQFSRPEQQTIKAGNLLSRVSRCHVCMKNSS |
NT seq |
5316 nt +upstreamnt +downstreamnt
atgttgccccactggaagcggctgctgttcgccgctgtgtttgctggagcggtttttagt
acaaacgctcaattttggaagcaatcgggcacatcgggatcaatatatgagaatgtgcgc
cagagagacgattcacgagtagcatactcgatggacgagagttacgatattgttgattcg
gccaagaattgtacggcgggcaggggctgtgtgcccaagtgcattgcggagaagggcaat
cgtggcctgcccgggcccgagggtccgatcggtatcacgggtttgaagggatatgccggt
cccgagggaccgcccggtgacaagggccaaaagggtgatccgggaccatatggagcacgt
ggcgacaaaggtgaaagtggcatgcccggtgtacccggtatgccgggtttgcgcggttta
tccggtacacccggtacacccggtaatcccggtacaagtggcaaggatggctgcgagggc
aaacagggtctgctcggcgtacccggtctggatggtatgcccggaccacgcggttttccc
ggcggtcccggcatcaagggcgagaaaggtgatccggccaaggagaacggtgactatgcc
aagggtgagaagggtgatcctggccatgcaggtcgtcccggccccgccggcccggagggc
gaacgcggtgagaagggagaacgcggtgattcgggtccatatggaccgcccggactacgt
ggtgatcgcggcatcaagggtgacaagggtgccgcctgctttgccataccactggctggc
aagcaaggcgagaagggcgaaaagggagatccggcaccaaggctgccagcccacggcact
gacacggtcgtcggtcagcgcggtgatgtcggccagaagggtgaaatgggaccgatgggc
cttaagggcggtctaggaccggctggtgagccaggacacgatggacgaaagggtgaaaaa
ggcttgcctggcggcgctggtgaaagaggtcgtcaaggtaactttggtccccccggaccg
cttggacaaaagggagatcgtggcgagaacggtttgaatggcctgcccggtcagtcgggt
gtgaaaggtgagccgggacgtgatggaaagccgggagatcgtggtctggttggaccccaa
ggaccgccgggcggtggacgtgggcaaccgggcccaagcggaccaaagggacctcgtggc
tatgctggtcagcccggtccaaagggcttggacggcatggatggaccacaaggacagaaa
ggctacatgggtcccaaaggtggccccggcttggccggcaatccgggcaacgaaggacct
ccgggacaaaagggtgagaagggtaacgctggccgattaggcccctcgggtcctaaagga
ccaattggacacaatggccctccaggacctgaaggacaaaatggcgaggatggtatgcca
ggccacggtatccaaggacctaaaggagatgatggacaacccggatcccccggccaaaaa
ggcagcaagggagaacgtggctttatgggtgagcgcggtgtgcccggcgattcgaaattg
ggccgacctggcataccaggtcgcgctggtagtcccggacaaaagggtgaagacggtcgc
cctggcaatcatggcgagaaaggtgacatgggccctaagggtgatgtgggtggcaagtgc
tcgttgtgtccacctggactgaagggagataaaggtgaacatggcgtccccggcatgcct
ggcaatcctggcgagcgtggaccaaccggtgagcgcggctaccaaggcgatcgtggtgaa
gatggcataactggactagacggaccccagggtatgaagggagaggaaggctatccgggt
gtacccggatcgatgggtcccaagggtgattcttgccttgaggacctcagcctgatcaag
ccggagaggggacagaagggcgagcaaggatatcccggtgcatccggcgtgaagggtgaa
cccggtgagaatggaaataacggcgctcctggcctcaagggcgaaatgggagtgaagggc
gatatgggctatgccggtcagcctggtaatgatggtgcgcctggcagcgatggtctacgc
ggcttcaatggtgtcgatggtataagcatcaagggcgaacctggtcgtgctggctacgat
ggcattaagggtgacaagggctccacgggctattctggattgaagggcgaaccgggcaca
tgcgccgcaagcgaactgaaggtgccgctcaagggtaacaagggtgagcgtggcaacact
ggcatgcccggacccagcggtgaaatgggccagaagggtgaacatggcctgcccggcgag
aaaggcgcaatgggacctcaaggaccagtcggtaatgttggaccacgcggcttgaccgga
caacgcggcgacaagggcaatcccggccaatatggtacgcctggtagcgatggcaaggat
ggagtccgtggaccgccgggtcgcaatggcgagcgtggacaaaagggagagcaaggcatc
actgtggcgggaccacgtggcccacaaggtcgcgatggtttgattggcgagaagggcgat
cgcggcgtcgttggagctaccggccgtgtcggaccggatggcaatccgggttatccaggc
gagaagggtgatgccggttccgctggttcaccaggccggactggcctggtcggtgccaag
ggtgaaccgggcccagttggtcccgaaggacgtcccggcccacccggtagtcccggcatc
gatggtgttcagggacgtgacggtgccaagggcgaggttggtatgcccggtctcgttggt
atgccaggcatcaaaggtgagcgcggagcaccaggcaacgatggtcagaaaggcttcacc
ggtcctgccggtggcatgggccagcgtggtcctctcggttcagctggtattcctggaatg
aagggagacaagggtgagaggggtttgactggcaacgatggcctgactggcgcccgtggt
gcacccggaccacccggtattaggggttttaagggtgacaccggtccacagggtcaaccc
ggccaaaacggctccgatggctatatgggcgagaaaggtgaccagggcctgccgggcttc
gagggaccacagggcgagccaggcgatgcttccgaaaagggagagaagggtgagcccggt
ctgtccggactacgcggccaggatggaccggtcggattgccaggtatgattggcgagaag
ggactggctgctctacccatacatggacggcccggtgcaccgggtgagaagggcaacgct
ggacgtgacggcctcgatggacaaaatggacggccgggtgaaaagggtgatgctggcttt
ccgggcgcaagtggaccaaagggtgacaaaggtattgccggacagccgggcctgactggc
ggtcctggcaatgatggtcagcccggaccccaaggcagtcgtggcgctacaggctacgcc
ggtcccaagggcaacaagggcgagcgtgggctagctggtgccgctggcgcaaagggtgtc
atgggtctgacgggccgacaaggatatcccggcgaaactggcgcaaagggtgacaagggc
gaacggggtccgaggggaccagccacccaagtcaacatgctggatctgaggggtgagaag
ggtatccgcggcagcgatggcctgcccggccggcccggacttcagggtatcaagggcaac
caaggaccagttggctatccaggcgagaagggagagcatggcctaaccggaccctctggc
attgctggcctgcctggcttacctggatcaaagggtgatatgggcttgcatggtgagcct
ggagcacctggccccattgtcaagggcgagaagggtctgcccggacgtaatggcaaatct
ggacgtgaaggtgcaactggaccacgtggcatgaagggcgatcgtggcttgcccggcctg
gctggcaacgctggtctcgttggtctacccggacccatcggtccgaccggtatgaaaggt
gaacgtggtatgactggtacgcctggcattgatggcagtgctggctttaatggtgtgccc
ggcctaaagggagaggccggttttcccggactcaagggtgagcgcggcgtcgctggcttc
gagggacaaaagggcgacaagggtgacagaggcatggctggagcacctggtcggattggt
ctgactggtctcaaaggtaatatgggcatgcctggcatggatggtcaaccaggacgcccg
ggtccagtgggcgagaagggtttggccggactcaagggccgtgatggctacaacggtcag
cctggtgcacgtggcattaagggtgagcctggcctgttgtcaccgcccggaccaaagggt
gaacccggcaatcccggtcacaatggacaaaagggagagattggaccaccgggtgccact
ggtctgattggcatccaaggtgaacgtggcgagaagggtgaacgtggtgccatcggtcta
tccggcgctgtcggtcaccccggcatcaagggcgaacgtggcgaacaaggacagaagggt
tatgcgggtgctgttggtgccatcggttacaagggtgagcccggccagtcgtacagcggt
gcccaggactatctgaccggtatactggtgacgcgtcacagccaaagcgttcaggtgcca
caatgtgcggcgggtcacatcgaattatggacgggctactcactgctctatgtcgatggc
aatgattattcgcataatcaggatctcggccagcccggctcgtgtgtgcagcacttctcc
acactgccggtgctgtcctgcggacagaacaacgtatgcaactatgcgtcgcgtaacgac
agaagcttctggctatccacatcggcatccattccgatgatgccggtcaacgataacgag
atccgcaaatatatttcacgctgcgttgtctgcgaggcgccagccaatgtgattgccgtg
cacagccagtcgcaggcgatacccgactgccccaatggctgggagagcctatggttcggc
tacagtttcctcatgcacacggccgttggcaatgggggcggtggacaggcgctccaatcg
cctggctcctgcttggaggacttccgggccacaccgttcattgagtgcaatggggctaag
ggacactgccatttctatgagacgatgacgagcttctggatggtcacgttggaggatggc
gatcagttctcgcggcccgagcagcagacaatcaaggcgggcaatctactgtctcgcgtc
tccaggtgtcatgtctgtatgaagaactcgtcataa |