Entry |
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Name |
(RefSeq) collagen alpha-1(IV) chain
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dgr00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6561570
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6561570
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
6561570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:dgr04147]
6561570
00536 Glycosaminoglycan binding proteins [BR:dgr00536]
6561570
Exosome [BR:dgr04147]
Exosomal proteins
Exosomal proteins of other cancer cells
6561570
Glycosaminoglycan binding proteins [BR:dgr00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
6561570
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SSDB |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1771 aa
MLPHWKRLLFAAVFAGAVFSTNAQFWKQSGTSGSIYENVRQRDDSRVAYSMDESYDIVDS
AKNCTAGRGCVPKCIAEKGNRGLPGPEGPIGITGLKGYAGPEGPPGDKGQKGDPGPYGAR
GDKGESGMPGVPGMPGLRGLSGTPGTPGNPGTSGKDGCEGKQGLLGVPGLDGMPGPRGFP
GGPGIKGEKGDPAKENGDYAKGEKGDPGHAGRPGPAGPEGERGEKGERGDSGPYGPPGLR
GDRGIKGDKGAACFAIPLAGKQGEKGEKGDPAPRLPAHGTDTVVGQRGDVGQKGEMGPMG
LKGGLGPAGEPGHDGRKGEKGLPGGAGERGRQGNFGPPGPLGQKGDRGENGLNGLPGQSG
VKGEPGRDGKPGDRGLVGPQGPPGGGRGQPGPSGPKGPRGYAGQPGPKGLDGMDGPQGQK
GYMGPKGGPGLAGNPGNEGPPGQKGEKGNAGRLGPSGPKGPIGHNGPPGPEGQNGEDGMP
GHGIQGPKGDDGQPGSPGQKGSKGERGFMGERGVPGDSKLGRPGIPGRAGSPGQKGEDGR
PGNHGEKGDMGPKGDVGGKCSLCPPGLKGDKGEHGVPGMPGNPGERGPTGERGYQGDRGE
DGITGLDGPQGMKGEEGYPGVPGSMGPKGDSCLEDLSLIKPERGQKGEQGYPGASGVKGE
PGENGNNGAPGLKGEMGVKGDMGYAGQPGNDGAPGSDGLRGFNGVDGISIKGEPGRAGYD
GIKGDKGSTGYSGLKGEPGTCAASELKVPLKGNKGERGNTGMPGPSGEMGQKGEHGLPGE
KGAMGPQGPVGNVGPRGLTGQRGDKGNPGQYGTPGSDGKDGVRGPPGRNGERGQKGEQGI
TVAGPRGPQGRDGLIGEKGDRGVVGATGRVGPDGNPGYPGEKGDAGSAGSPGRTGLVGAK
GEPGPVGPEGRPGPPGSPGIDGVQGRDGAKGEVGMPGLVGMPGIKGERGAPGNDGQKGFT
GPAGGMGQRGPLGSAGIPGMKGDKGERGLTGNDGLTGARGAPGPPGIRGFKGDTGPQGQP
GQNGSDGYMGEKGDQGLPGFEGPQGEPGDASEKGEKGEPGLSGLRGQDGPVGLPGMIGEK
GLAALPIHGRPGAPGEKGNAGRDGLDGQNGRPGEKGDAGFPGASGPKGDKGIAGQPGLTG
GPGNDGQPGPQGSRGATGYAGPKGNKGERGLAGAAGAKGVMGLTGRQGYPGETGAKGDKG
ERGPRGPATQVNMLDLRGEKGIRGSDGLPGRPGLQGIKGNQGPVGYPGEKGEHGLTGPSG
IAGLPGLPGSKGDMGLHGEPGAPGPIVKGEKGLPGRNGKSGREGATGPRGMKGDRGLPGL
AGNAGLVGLPGPIGPTGMKGERGMTGTPGIDGSAGFNGVPGLKGEAGFPGLKGERGVAGF
EGQKGDKGDRGMAGAPGRIGLTGLKGNMGMPGMDGQPGRPGPVGEKGLAGLKGRDGYNGQ
PGARGIKGEPGLLSPPGPKGEPGNPGHNGQKGEIGPPGATGLIGIQGERGEKGERGAIGL
SGAVGHPGIKGERGEQGQKGYAGAVGAIGYKGEPGQSYSGAQDYLTGILVTRHSQSVQVP
QCAAGHIELWTGYSLLYVDGNDYSHNQDLGQPGSCVQHFSTLPVLSCGQNNVCNYASRND
RSFWLSTSASIPMMPVNDNEIRKYISRCVVCEAPANVIAVHSQSQAIPDCPNGWESLWFG
YSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGHCHFYETMTSFWMVTLEDG
DQFSRPEQQTIKAGNLLSRVSRCHVCMKNSS |
NT seq |
5316 nt +upstreamnt +downstreamnt
atgttgccccactggaagcggctgctgttcgccgctgtgtttgctggagcggtttttagt
acaaacgctcaattttggaagcaatcgggcacatcgggatcaatatatgagaatgtgcgc
cagagagacgattcacgagtagcatactcgatggacgagagttacgatattgttgattcg
gccaagaattgtacggcgggcaggggctgtgtgcccaagtgcattgcggagaagggcaat
cgtggcctgcccgggcccgagggtccgatcggtatcacgggtttgaagggatatgccggt
cccgagggaccgcccggtgacaagggccaaaagggtgatccgggaccatatggagcacgt
ggcgacaaaggtgaaagtggcatgcccggtgtacccggtatgccgggtttgcgcggttta
tccggtacacccggtacacccggtaatcccggtacaagtggcaaggatggctgcgagggc
aaacagggtctgctcggcgtacccggtctggatggtatgcccggaccacgcggttttccc
ggcggtcccggcatcaagggcgagaaaggtgatccggccaaggagaacggtgactatgcc
aagggtgagaagggtgatcctggccatgcaggtcgtcccggccccgccggcccggagggc
gaacgcggtgagaagggagaacgcggtgattcgggtccatatggaccgcccggactacgt
ggtgatcgcggcatcaagggtgacaagggtgccgcctgctttgccataccactggctggc
aagcaaggcgagaagggcgaaaagggagatccggcaccaaggctgccagcccacggcact
gacacggtcgtcggtcagcgcggtgatgtcggccagaagggtgaaatgggaccgatgggc
cttaagggcggtctaggaccggctggtgagccaggacacgatggacgaaagggtgaaaaa
ggcttgcctggcggcgctggtgaaagaggtcgtcaaggtaactttggtccccccggaccg
cttggacaaaagggagatcgtggcgagaacggtttgaatggcctgcccggtcagtcgggt
gtgaaaggtgagccgggacgtgatggaaagccgggagatcgtggtctggttggaccccaa
ggaccgccgggcggtggacgtgggcaaccgggcccaagcggaccaaagggacctcgtggc
tatgctggtcagcccggtccaaagggcttggacggcatggatggaccacaaggacagaaa
ggctacatgggtcccaaaggtggccccggcttggccggcaatccgggcaacgaaggacct
ccgggacaaaagggtgagaagggtaacgctggccgattaggcccctcgggtcctaaagga
ccaattggacacaatggccctccaggacctgaaggacaaaatggcgaggatggtatgcca
ggccacggtatccaaggacctaaaggagatgatggacaacccggatcccccggccaaaaa
ggcagcaagggagaacgtggctttatgggtgagcgcggtgtgcccggcgattcgaaattg
ggccgacctggcataccaggtcgcgctggtagtcccggacaaaagggtgaagacggtcgc
cctggcaatcatggcgagaaaggtgacatgggccctaagggtgatgtgggtggcaagtgc
tcgttgtgtccacctggactgaagggagataaaggtgaacatggcgtccccggcatgcct
ggcaatcctggcgagcgtggaccaaccggtgagcgcggctaccaaggcgatcgtggtgaa
gatggcataactggactagacggaccccagggtatgaagggagaggaaggctatccgggt
gtacccggatcgatgggtcccaagggtgattcttgccttgaggacctcagcctgatcaag
ccggagaggggacagaagggcgagcaaggatatcccggtgcatccggcgtgaagggtgaa
cccggtgagaatggaaataacggcgctcctggcctcaagggcgaaatgggagtgaagggc
gatatgggctatgccggtcagcctggtaatgatggtgcgcctggcagcgatggtctacgc
ggcttcaatggtgtcgatggtataagcatcaagggcgaacctggtcgtgctggctacgat
ggcattaagggtgacaagggctccacgggctattctggattgaagggcgaaccgggcaca
tgcgccgcaagcgaactgaaggtgccgctcaagggtaacaagggtgagcgtggcaacact
ggcatgcccggacccagcggtgaaatgggccagaagggtgaacatggcctgcccggcgag
aaaggcgcaatgggacctcaaggaccagtcggtaatgttggaccacgcggcttgaccgga
caacgcggcgacaagggcaatcccggccaatatggtacgcctggtagcgatggcaaggat
ggagtccgtggaccgccgggtcgcaatggcgagcgtggacaaaagggagagcaaggcatc
actgtggcgggaccacgtggcccacaaggtcgcgatggtttgattggcgagaagggcgat
cgcggcgtcgttggagctaccggccgtgtcggaccggatggcaatccgggttatccaggc
gagaagggtgatgccggttccgctggttcaccaggccggactggcctggtcggtgccaag
ggtgaaccgggcccagttggtcccgaaggacgtcccggcccacccggtagtcccggcatc
gatggtgttcagggacgtgacggtgccaagggcgaggttggtatgcccggtctcgttggt
atgccaggcatcaaaggtgagcgcggagcaccaggcaacgatggtcagaaaggcttcacc
ggtcctgccggtggcatgggccagcgtggtcctctcggttcagctggtattcctggaatg
aagggagacaagggtgagaggggtttgactggcaacgatggcctgactggcgcccgtggt
gcacccggaccacccggtattaggggttttaagggtgacaccggtccacagggtcaaccc
ggccaaaacggctccgatggctatatgggcgagaaaggtgaccagggcctgccgggcttc
gagggaccacagggcgagccaggcgatgcttccgaaaagggagagaagggtgagcccggt
ctgtccggactacgcggccaggatggaccggtcggattgccaggtatgattggcgagaag
ggactggctgctctacccatacatggacggcccggtgcaccgggtgagaagggcaacgct
ggacgtgacggcctcgatggacaaaatggacggccgggtgaaaagggtgatgctggcttt
ccgggcgcaagtggaccaaagggtgacaaaggtattgccggacagccgggcctgactggc
ggtcctggcaatgatggtcagcccggaccccaaggcagtcgtggcgctacaggctacgcc
ggtcccaagggcaacaagggcgagcgtgggctagctggtgccgctggcgcaaagggtgtc
atgggtctgacgggccgacaaggatatcccggcgaaactggcgcaaagggtgacaagggc
gaacggggtccgaggggaccagccacccaagtcaacatgctggatctgaggggtgagaag
ggtatccgcggcagcgatggcctgcccggccggcccggacttcagggtatcaagggcaac
caaggaccagttggctatccaggcgagaagggagagcatggcctaaccggaccctctggc
attgctggcctgcctggcttacctggatcaaagggtgatatgggcttgcatggtgagcct
ggagcacctggccccattgtcaagggcgagaagggtctgcccggacgtaatggcaaatct
ggacgtgaaggtgcaactggaccacgtggcatgaagggcgatcgtggcttgcccggcctg
gctggcaacgctggtctcgttggtctacccggacccatcggtccgaccggtatgaaaggt
gaacgtggtatgactggtacgcctggcattgatggcagtgctggctttaatggtgtgccc
ggcctaaagggagaggccggttttcccggactcaagggtgagcgcggcgtcgctggcttc
gagggacaaaagggcgacaagggtgacagaggcatggctggagcacctggtcggattggt
ctgactggtctcaaaggtaatatgggcatgcctggcatggatggtcaaccaggacgcccg
ggtccagtgggcgagaagggtttggccggactcaagggccgtgatggctacaacggtcag
cctggtgcacgtggcattaagggtgagcctggcctgttgtcaccgcccggaccaaagggt
gaacccggcaatcccggtcacaatggacaaaagggagagattggaccaccgggtgccact
ggtctgattggcatccaaggtgaacgtggcgagaagggtgaacgtggtgccatcggtcta
tccggcgctgtcggtcaccccggcatcaagggcgaacgtggcgaacaaggacagaagggt
tatgcgggtgctgttggtgccatcggttacaagggtgagcccggccagtcgtacagcggt
gcccaggactatctgaccggtatactggtgacgcgtcacagccaaagcgttcaggtgcca
caatgtgcggcgggtcacatcgaattatggacgggctactcactgctctatgtcgatggc
aatgattattcgcataatcaggatctcggccagcccggctcgtgtgtgcagcacttctcc
acactgccggtgctgtcctgcggacagaacaacgtatgcaactatgcgtcgcgtaacgac
agaagcttctggctatccacatcggcatccattccgatgatgccggtcaacgataacgag
atccgcaaatatatttcacgctgcgttgtctgcgaggcgccagccaatgtgattgccgtg
cacagccagtcgcaggcgatacccgactgccccaatggctgggagagcctatggttcggc
tacagtttcctcatgcacacggccgttggcaatgggggcggtggacaggcgctccaatcg
cctggctcctgcttggaggacttccgggccacaccgttcattgagtgcaatggggctaag
ggacactgccatttctatgagacgatgacgagcttctggatggtcacgttggaggatggc
gatcagttctcgcggcccgagcagcagacaatcaaggcgggcaatctactgtctcgcgtc
tccaggtgtcatgtctgtatgaagaactcgtcataa |