Drosophila grimshawi: 6561890
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Entry
6561890 CDS
T01061
Name
(RefSeq) putative ATP-dependent RNA helicase SoYb isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
dgr
Drosophila grimshawi
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dgr03036
]
6561890
Enzymes [BR:
dgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
6561890
Chromosome and associated proteins [BR:
dgr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
6561890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6561890
NCBI-ProteinID:
XP_001988260
UniProt:
B4JCH3
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MSACNSDKCSQNQLEDKNQPLAINPEEGIVITHYVNPHLFCYTTWLQLAAGGVRVNRMES
QLSPHCHVDNQREFYVPDQHVIVSRCKLLRGLVIVGKHAEYLVWALDYGFFIKCQPKDMW
LLPPSLCQKHIHFQWGGVAHVAPNSGTEWSNRAVRLLDQRLLEAQLLVYKNLYQNEEQHN
NGQLLIKSAQHGGTFVDAASYLVDSECGRPELSSEASTRAVYDKHLLELNHSDIETSCCS
TVFMELVERLFSKMPDMLDVGLDPGAAPKMPESAKRLTKVKSCNDSVVETALIGGSRKST
SGSSSNSSNWSLNSFDASVDPMQAKPATAIQIKRYNLEMFRQPRRNEEKSTKLKENPCVL
NLIEEDRKNVKSDCQSSATRQESLEKHKIIQSETNNQLESHQKLQANLEQKYNQFGTSTG
AYYADKGLIHIKEEPQMHQASIQEPDALQPNKIDQPVNNIQAELVKKLADQTDKVEGKQA
NKKSNKNRQTLSKSIFEGIHNETSSSLNCTNLVLAHSTAPVAAMRSWPESQLCANTMKAL
VELKLLTALPTQLYAWPHLMAGNSLVLIDRIGSGRSMCYLPALCSLVMGSMAAWNTPGMG
PLAVLLADSVANAQTLSNQCNILMAGHDTSMVKVLNTHAQCMEEVHLMLLNSCGILVTTV
THLWQLLRHAIQLIDTQRLKYFIFDDYDRMRSTAPDLLNEVLQLLHNIKIPQLILVAQQW
HGRVFHELLKRFGQHHLLLFGDFLEAAVYGGVKINVAVQPSGKKTQQLLDYLANQRPLQR
RTLVYCKNEAELKKLQHALTAAGHECIGPSDAANQQFRQLLLLTDEGQQSHVSVANYELI
VHYSLPESWSKFSYRFHAISNNIANCLAPPISKQDMVSYVMLDESNSNELPRLVQFFNAH
HIESNEQLKQLDASCRQLKDHSRPFCPEMLYNGECRQFYCNKRHDAVSEDFQRPICALWQ
PGTVVRCNLMTIYDPGHFAVMAVSYKDKDSTAWRDASNLSTLRKLSTSLYIHMSCEENCR
TKQNLRMSDVCVLRRGGSYQRVRVVDMSDKRLITVQLMDEGTEQLKVKPTELLECDARFI
EEPALAMDVRLLGLAPSIGEGDWPAEAKKWVSDVVSGLNDNQHLQLIVEFAMLDVVYAKE
MAVVQDCPTMRTCVRVTQLACELIRQGFGKRDEQSIRKLHKLHEKTEMEQRQLTEASKAS
AAEQEIIELSLEIDNSPEEKIINETIATVNESKLSYIYGLMKRYLKNRVVAVPGGAATSI
TSDQVQSLHSKEEPNTTTKARQDEADADSVATFIDALLQDLNSDDPSVRAATQHMLHDML
GSDEASSLTTGNLKNTLKNNSRAITESKSKIKLDALYYGVIAGHAVRPKVRWHQTLLQIE
LIFEQQVPQYQLLHQGNVLIYQVKDTTPIQRCILNLLGEVRILSERQHGYQLHVKLAKQG
LNVYWPSLLNSLYAQQHSHWLVYDTERAKPPPKTMAHIHWKRYQRYQYQEKDGDDDGIFS
STDEQNELSDEDWMESDNI
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctgcaacagcgacaaatgcagccaaaaccaactggaggataaaaaccagccg
ctggccattaaccccgaggagggaatcgtgataacgcactatgtgaatccgcatctgttc
tgctacacaacatggctgcagctggcggctggcggtgtcagggttaaccgcatggagtcg
caactgtcgccgcattgtcacgtcgacaaccagcgggagttctacgtcccggatcagcat
gtcatcgtgagcaggtgcaaacttttgcgtggcctcgttattgttggcaagcacgccgag
tatctggtatgggcattggattatggcttctttatcaaatgccagcccaaagatatgtgg
ctgctgccgccaagcctgtgccaaaagcacatccactttcagtggggtggcgtggcccat
gtggcgcccaacagcggcactgaatggtccaacagggcagttcgcttgcttgaccagcga
ctgctggaggcccagttgctggtttacaagaatctgtaccaaaatgaggagcagcacaac
aatggtcaactactgatcaagtctgcacagcatggtggcacttttgtggatgctgccagc
tatctggtggactctgaatgtggacgcccggagctaagctcagaagccagtacgagagct
gtctatgacaaacatctgttggagttgaaccattcagatattgagactagttgctgctct
acggtttttatggaactcgtggaaaggctgttctccaaaatgccggatatgttagacgtt
ggactcgatcccggagcagcgccaaaaatgccagaatccgcaaagcgtctgaccaaggtg
aaaagctgcaatgatagcgttgtggagacggcgctaataggaggctcaaggaaatcaacc
agtggctcaagcagcaacagcagcaactggtccttgaatagttttgatgcttcagttgat
ccaatgcaagcaaaaccagcaacagcaatacaaatcaaacgatacaatttggagatgttt
aggcagccaagaagaaatgaagaaaagtccactaagctgaaggaaaatccctgtgtgctg
aacctaattgaagaagatcgaaaaaatgtgaaaagcgattgccaatcttcagctacccgt
caagaatcattggagaagcataagattattcaatctgagaccaataaccagttggaatca
catcagaaactgcaggctaacctagaacagaaatataatcaatttggtacttcaactggt
gcttactatgctgataaggggctcattcacatcaaagaggaaccgcaaatgcatcaagct
tctattcaagagccagatgcattgcagccaaataaaattgaccaacctgtgaataatatt
caggcggaattagttaagaaattggcagatcaaaccgataaagtggaaggcaagcaagct
aataagaaatcaaataagaaccgacaaacactttccaagtccatatttgaaggcatccat
aatgaaaccagttcttcgttgaactgcacaaatcttgtgctggcacacagcacagctcca
gttgcggccatgcgatcctggccagagtcacagctctgcgcaaacacaatgaaggccttg
gtggagctgaagttgctaacggcgctgcccacacaactgtatgcttggccccatctgatg
gcgggcaactcgctggtgctgatcgatcgcattggcagcggtcgctccatgtgctatctg
cccgctttgtgctcgttggtcatgggcagcatggcagcctggaatacacccggcatggga
ccattagctgtgctgctggcggactcggtggccaatgcacaaacgctgtccaatcagtgc
aatatcctgatggcaggccacgacacgagcatggtgaaggtgctcaacacacatgcccag
tgcatggaggaggtgcacttgatgctgctcaattcatgtggcattttggttaccacagtg
acgcatttgtggcaactgttgcgccatgccattcaactgatcgatacgcaacgcctcaag
tatttcatcttcgatgattatgatcgcatgcgaagtacggcgccagacttgctaaatgag
gtgctccagttgctgcacaacattaagataccacagctaatcctcgtggctcagcagtgg
catggacgtgttttccatgaactgctcaagcgatttggtcagcatcatcttctcctcttt
ggcgacttcctggaggcagccgtctacggcggcgtcaaaataaacgtggccgttcagccc
agcggcaagaagacacagcagctactcgactatctggccaaccaaaggccactgcagaga
cgcacacttgtctactgcaaaaacgaggcggagctgaaaaagctgcaacatgcgctgaca
gcagctggacatgaatgcatcggcccaagcgacgcagctaatcagcagttccgtcagctg
cttttgcttacggatgagggtcaacaaagccatgtatccgttgcgaattatgagctaatt
gttcactacagcctgcccgagtcctggtcaaagttctcatatcgtttccatgcgatcagc
aacaacatagccaactgtttggctccaccgatatcgaagcaggacatggtctcctatgtg
atgctggacgagagcaatagcaacgagctgccgcgtcttgtgcagttcttcaatgcccat
cacattgaatcgaacgagcaacttaaacaactggatgccagttgtcgccagctcaaggat
cacagtcgtcccttctgccctgaaatgctgtacaacggcgagtgtcgtcaattctactgc
aacaaacggcatgacgcagtcagtgaagactttcagcgaccgatttgcgctctgtggcag
ccagggaccgttgtgcgctgcaaccttatgacaatttatgatccaggccactttgctgtt
atggctgtgagctacaaggataaggacagcacagcctggcgggatgcatccaatctttca
acactgcgcaaactgagcacatctctctacatacacatgagctgcgaggagaattgtcgc
accaagcaaaacctgagaatgtcagatgtgtgtgttctgcgtcgaggtggcagttaccag
cgggtgcgcgttgtggacatgtcggacaagcgacttatcaccgtccaactaatggatgag
ggcacagaacagctgaaagttaaacccacagaattactagagtgcgatgctcgattcata
gaggaacctgccctggctatggatgtgaggttgctcggcttggcgccatcgattggtgag
ggcgattggccagcggaagctaaaaagtgggtcagcgatgtggtaagtggcctcaacgat
aatcagcatttgcaactgattgtggaattcgccatgctcgatgttgtctacgccaaggaa
atggctgtggttcaggactgccccacaatgagaacctgtgtgagagtgacccaactagcc
tgtgagctaatccgtcaaggatttggcaagcgagatgagcagagcatccgaaagttgcat
aaattgcatgagaagacggaaatggaacagcgtcagctaacagaagcatccaaagcgtct
gcagcggagcaagagataattgagctatctctggagatagataattctccagaagaaaaa
attataaatgagacaattgcaacagttaacgaaagcaaattgagctatatttatggttta
atgaagcgatacttaaaaaatcgagttgttgcagttccaggaggggcagccacttcgatt
acgagtgatcaagtgcaatctttgcactcaaaagaagaacccaacacgacaacaaaagca
aggcaagacgaagcggacgcggatagtgttgcaacatttattgatgcactgctgcaggat
ctgaacagtgatgatccgtcagtgcgggctgccacacagcacatgctgcacgatatgctc
ggcagcgatgaggcgagttctctcacaaccggcaatcttaaaaacacactcaaaaacaac
tcaagagcaataaccgaatcgaagtcaaaaatcaagcttgatgctctgtattatggcgta
atcgctgggcatgctgtgcggcccaaggtgcgttggcatcagacactgctgcagattgag
ctgatttttgagcagcaagtgccgcaatatcagctcctgcatcagggcaatgtgctgata
tatcaggtcaaagatacaacaccaatccaacggtgcattctcaatctgctgggcgaggtg
cgtattttgtcagagcgtcagcatggttaccagttgcatgtaaaactggccaagcagggc
ctcaacgtgtattggcccagtttactcaactcattgtatgcgcagcagcatagccactgg
ctggtctacgacacggagcgagccaagccgcccccaaaaactatggcgcacatccattgg
aagcgatatcagcgttatcagtaccaggagaaagacggcgacgacgatggcatcttctct
tcgacggatgagcagaacgaactatccgatgaagattggatggaaagcgataatatttaa
DBGET
integrated database retrieval system
