Drosophila grimshawi: 6562118
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Entry
6562118 CDS
T01061
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
dgr
Drosophila grimshawi
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6562118
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
6562118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
6562118
NCBI-ProteinID:
XP_032592001
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MRAMSFRKYYSWKYPDVPEDVAPLLLELKNSLVVVGVVGRSKCSLANKMSVFGMQPEETH
EPANGQIMCYYKPGTSTLLLHFESTHDEVVLGQKLLEQTSIDFDHFYGNMRSQFVRMMLL
ALHTCHIVVYVETGQTFDPALVTICQLLKYVREQHLLEFLPQLLRETSAGNLLGDRARLC
TPRILFIFENYPADVEKTREFISTHEFQTEDKIYELFRQYNIVMQSASNSLLALPNNKQF
VFYNANEILRPDRLLLAIDALNATMYKQDVKEEEEDLEIIALAPFEGFVKPFGDAYTVRK
SDEQLYRESHTVWHFLQRHVQDALEGCFDEGSFKQLSQSPPFQLLNFKTWHMCMVSIHKL
LVGNVEDVNYVSTNAHYQAYLRDFTESLNYEKRFWYHLSELGLKKGISAYKHSAAVTYGS
AAHKQMLANATLVFEEEGRGPYAELALAKLNDVCLRYWHDGRQQCEFPSLRGNPCILPRD
VSHDKHSSGVVHISSCNCGRTLGRREDPYTLRQANYDYYEHMAVMCNLCVKVKRFQFPVF
TPSISDYRAAAFEAAFPLLLQAHKNRAEPQVEEDSDQEANAAEEPYSQPATEAEPEPEKE
PQASANEWSQPMSATYGSDLNMSIAGFGVSLKEGGAEAEVEEAEVCDKGSQDNSTSSDTS
TESEIELQPKERSAQKANQIVARESLSKGIRSVTHQPELISTTEYLPGLVHMCSGLELLP
LFPSWSLACVGPSSIYSHNTGLQEHFQSGFLSGANYLLPWDVQVRLVQPHYKHQQQQLMG
KKNQRYRKQGDRLALKIFIGFEYECSRGHRFMMRSPERVLRGGADIERDTSTKVINNNMP
LYFPCPCRAQNTFLAQLMRIHVVTPKAPVNIILDPKVLVGKYTFTLGCSILPMLSQSAYW
ILRLPYVYQGDNEIIAPPEKIEPTNRLAGGCILAGLFGIAETESMELKEPRITSMTFTRL
QSHAYK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaatgagctttagaaaatattactcctggaaatatccggacgtacccgaggat
gtagcgccactgctgttggagctgaagaattcgctggttgttgttggcgttgtgggtcgc
tcgaaatgttcgctggccaacaagatgagcgtctttggcatgcagcccgaggaaacgcat
gagccggcgaatgggcaaattatgtgctactacaagccgggtacaagtacactgctgttg
cactttgagagtacccacgatgaggtggtgctgggccagaagctgctggagcaaacgtcg
attgacttcgaccacttctatgggaatatgcgtagtcagtttgtgcgcatgatgctgctg
gcgttgcacacctgtcacattgttgtctatgtggagacgggccagacatttgatccagca
ctggtgaccatttgccagctgttgaagtatgtccgcgagcagcatctgctagaatttctg
cctcaattgttgcgcgaaacatccgccggaaatttacttggggatcgagcgcgtctctgc
acgccgcgtattctgtttatttttgagaactatccagcggatgtggagaagacacgcgaa
ttcatctctacccatgagttccaaacggaggacaagatttacgaactattccgccaatat
aatatagtcatgcagagtgccagtaattcgctgctggcgctgcccaacaataaacaattt
gttttctacaatgcaaacgagattctacgtcccgatcgactactgcttgccattgatgcg
ctaaacgcgaccatgtacaagcaagatgtcaaggaggaggaggaggatttggaaatcatt
gcactggcgccattcgagggctttgtcaagccctttggcgatgcgtacactgtgcgtaaa
tccgatgaacagctctatagggagagtcataccgtttggcattttctgcagcggcatgtg
caggacgcactggaaggctgcttcgacgagggctcctttaagcagctgtcgcagtcacca
ccgtttcaactgttgaactttaagacctggcacatgtgcatggtcagcatacacaaattg
ctcgtgggcaatgttgaggatgtcaactatgtttcaacgaatgcacattatcaagcctat
ctgcgagactttacagagagtcttaactatgagaaaagattctggtaccatctgagtgaa
ctgggcttgaagaagggcatctcggcgtataagcattcagctgcagtcacttacgggagc
gcagcccacaagcaaatgctagcgaatgccacactagtcttcgaagaggagggacgtggt
ccatatgcggaactggcgctggccaagctcaacgatgtgtgcctcaggtattggcacgat
ggccggcagcagtgcgagtttcccagcctgcgtgggaatccctgcatcctgccgagggat
gtgtcacatgataagcatagcagcggcgtcgtgcacatctccagctgcaattgtggtcgc
acactggggaggcgtgaggatccatacacgctgcgacaggccaattatgattactacgaa
cacatggcagtcatgtgcaatctgtgcgtgaaagtcaaaagatttcagtttcccgttttt
acgccatccatcagcgattatcgcgcggcggcctttgaggcagcatttccactgctgctg
caggcgcacaagaatcgtgctgagcctcaagtggaggaggacagcgatcaggaagcgaat
gcagctgaggaaccctattcccagccagcgaccgaagcggaaccggaacccgagaaggaa
ccgcaagcatcggccaatgagtggtcacaacccatgtcggccacctatggctccgatttg
aacatgtccattgcgggttttggtgtctccctcaaagagggcggtgcggaggcggaggtc
gaagaagcggaggtctgtgacaagggtagtcaggacaacagcaccagcagcgacacctcc
actgagagtgaaatcgaactccagccaaaggagcgcagcgctcagaaagcaaaccaaatt
gtggctcgagagagtttgtccaagggaataaggagtgtgacacatcaaccggagctgata
tccacaacggaatatctgccgggactggtgcacatgtgcagcggcttggaattgttgccg
ctcttccccagctggtcgctcgcgtgcgtcggtcccagttccatttacagtcacaacacc
ggtttgcaggagcactttcagagcggctttctatccggcgccaactatctactgccctgg
gatgtgcaagtgcgtctcgtccagccgcactacaagcaccagcagcaacagcttatgggc
aagaagaatcaacgctatcgcaagcagggcgatcggctggccctcaagatcttcattggg
ttcgaatacgagtgctcgcgtggtcatcgtttcatgatgcgcagcccggagcgagtactc
cgtggcggtgcggatattgagcgcgacaccagcaccaaggtgatcaacaacaacatgccc
ctctattttccatgtccttgtcgggcacagaacacgtttctggcgcaactgatgcgcatt
catgtcgttacgcccaaggcgccagttaacatcattctcgatcccaaggtgcttgtgggc
aaatacactttcaccttgggctgctccattttgccgatgctgtcgcagagcgcctactgg
atcctgcgcctcccctatgtctatcagggcgacaatgagatcattgccccacccgagaag
atcgaacccactaataggttggccggcggctgtatccttgctggcttgtttggcattgcc
gagacggagtccatggagctcaaggagccgcgcatcacctcgatgacttttacacgacta
cagagtcatgcatacaaataa
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