Drosophila grimshawi: 6562348
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Entry
6562348 CDS
T01061
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dgr
Drosophila grimshawi
Pathway
dgr03013
Nucleocytoplasmic transport
dgr03015
mRNA surveillance pathway
dgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6562348
09122 Translation
03013 Nucleocytoplasmic transport
6562348
03015 mRNA surveillance pathway
6562348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6562348
03041 Spliceosome [BR:
dgr03041
]
6562348
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6562348
Spliceosome [BR:
dgr03041
]
Complex C
Other components
EJC/TREX
6562348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
6562348
NCBI-ProteinID:
XP_001987940
UniProt:
B4JAM1
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MRRRSERKKSSSPAPLPARRSRRSLKVSENEKTEDETPVEKPDELKAPPILEEINEERTE
RASSEEHAVAAAASPVRKSRNTRTTPKKRNSASNQREKSGERKVETIPEEMENGSETTAG
DNNVDIDNNLSAEKEPDEQLAEQQRQKEPEAEPIKPEKVLEEEEDAVKAPENPKDDDDQA
DGGQDTGKDTNSNSNSNRDECATGERSVEEVKVASSLSFTASKDEDNLKTTSDVLEIQTE
DVEERNSERLEQAEKPKTDDNKPVKPVKSDEHTENHKAGVEPATEPTSNQDKQEYVAQQR
SVRKRKWLSKKVADRAPPVLAISTDSLKNIIADVVNPVPLSDVQLESSSEEEGLVTSDHD
TDEHSLTPELRVIKDRDEGNATDDEQQKPQAKPNEKDTPTAALGANKSAVELASNAAGGV
AVARSPSPARNRASHVLFITNLVRPFTVLQLKGLLARTGKIIDEDGFWIDRIKSKCYVAY
ATEDEAIETRHALHGVRWPVSNPKCLNVDFGSRTDMDRAIQTTKNEAPKYPQDNTRDNQH
SGNTWSRLDASEKKPVRPVREWDVGKKEPNERDKSSNDRRRSSKERVDARLRESDRGKGG
DDAERSGQDRKRSRERERGGRERERERPDHPAHGRSRSGSPALKSRKKENEPPIRLLDDL
FRKTKGTPCIYWLPLTPEAIAEKEAFRQKRIEEHKQRIKEREERNKEREKDRDRQRDTRR
NRSNERRRSRSRDRERRRY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtcgtagcgagcgaaaaaaatcttcatcgccagcaccgttgccggcacgccgc
agcagacgatcgctgaaggtatcggaaaatgagaaaaccgaggatgagacgccagtcgag
aagccagatgaattaaaagcgccaccaatactcgaagaaatcaatgaggagcgcactgaa
cgcgcctcaagcgaggaacatgcggtggcggcagcggcatcgccagtgcgcaaaagccgc
aacacacgcacgacacccaagaagcgtaatagcgctagcaatcagcgtgagaagagtggc
gagcgcaaggtggaaacaatacccgaggaaatggaaaatggctcggagacaactgctggc
gacaacaacgtcgatatcgataacaatctatcggccgaaaaggaacccgatgaacaattg
gccgaacaacaacggcaaaaggagccagaggcagagccaattaaaccggagaaagttcta
gaggaagaagaagatgcagtaaaggcacccgagaatccgaaggatgatgatgatcaagct
gacggaggacaggacacgggcaaggacaccaacagcaatagcaacagcaaccgggatgaa
tgtgccactggcgaacggagcgtggaagaggtaaaagttgcttcttctttaagctttaca
gcaagtaaggatgaggacaatctaaaaaccacaagcgatgtattagaaattcaaacagag
gacgtggaagaaaggaactctgagagattggaacaggcagagaagcccaaaacggatgac
aacaagccagtcaaaccagtcaaaagcgatgaacacactgagaatcacaaggcaggtgtc
gagccagcaacagagccgacatccaaccaggataaacaggaatatgtggcgcaacagcgt
tccgtacgtaaacgcaaatggctgagcaaaaaggtggcggatcgagctccaccggtgctg
gccatttcaacggattcgctgaaaaacatcattgccgacgtggtgaatccggtgccgctt
agcgatgtgcagttggaatcatcgtcggaagaggagggcctcgtcaccagcgaccacgat
acggacgagcattcgctgacgcccgagttgcgcgttatcaaagatcgcgacgagggcaac
gcgaccgatgacgagcagcagaaaccacaagccaagccgaatgagaaggacacaccaacg
gcggcactgggtgcaaataaatcagccgtcgaacttgcttccaatgctgctggtggcgtt
gccgttgcccgctctcccagtccagcgcgcaatcgggccagccacgttctatttattacc
aatctggtgcgtccctttacggtgctgcagctaaaaggactgctggcgcgaactggcaag
ataattgatgaggatggcttctggatagatcgcatcaagtccaagtgctatgttgcatat
gccacagaggacgaagccattgagacacgtcacgcactgcatggcgtccgttggccggtc
tcgaatcccaagtgtttgaatgttgactttggtagccgcactgacatggatcgagccata
caaacgacaaagaatgaggcacccaagtatccacaggataataccagagataatcaacac
tcgggcaacacttggtcacgattggatgcaagtgaaaaaaagccggtgcgtccggttcgc
gaatgggatgtgggcaagaaggagcccaatgagcgcgacaagtcaagtaatgataggcgc
cgcagcagtaaggagcgcgttgacgccagattgcgtgaatccgatcgaggtaaaggcggc
gatgatgccgagcgcagtggacaggatcgtaagcgatcaagggaacgagaacgcggagga
cgcgaacgggagcgtgaacgccctgatcatcctgcgcatggtcgcagcaggagcggatcc
ccagcactgaaatcgagaaagaaggaaaatgaaccacccatcagactattagatgaccta
tttcgcaaaactaagggcacgccatgcatttattggttgcccctcacgccggaagctatc
gcggaaaaggaggcgttccgtcagaagcgcattgaggaacacaaacagcgaattaaggag
cgcgaggagcgtaataaggagcgcgaaaaggatcgtgatcgtcagcgggatacacgtcgt
aatcgctcaaatgaacgtcgacgctcgcgcagtcgcgatcgggagcgacggcgttactag
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integrated database retrieval system
