Drosophila grimshawi: 6563476
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Entry
6563476 CDS
T01061
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6563476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6563476
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6563476
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6563476
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6563476
U7-dependent histone pre-mRNA processing factors
6563476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
6563476
NCBI-ProteinID:
XP_001990215
UniProt:
B4JEZ6
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAQAQPTNDTHMPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIK
ISNISTDQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFMIEIAGI
KILYTGDFSRQEDRHLMAAEVPPKKPDVLITESTYGTHIHEKREDRESRFTTLVQKIVQQ
GGRCLIPVFALGRAQELLLILDEYWSQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDR
IRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPEEIITLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLRPN
HVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGHLAA
KKPEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWSSSLTTLQLLLDR
IGAGCVEIVEPERKLRVFNCVELTVEQKIIVMEWHATHVNDVYADAVLACLMQSELGGTN
IKGATKQTKSEESRFRECLIETLQDTFGDTCVPKMFKGDVLPITVSGKHAEINLETLTVH
CAEDEVLRQMLNTTLQKLHQTLVSAY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcgcaaccaacaaatgacacacacatgcccgatgaggagagcgatctgctg
caaatcaaaccgcttggagctggtcaggaagtgggacgctcctgcattatgctggaattc
aagggcaaaaagataatgctggactgtggcatacatccgggtttgtctggcatggatgcg
ctgccctatgtggacctgattgaggcggacgaaattgatttgctgttcatatcacatttt
catctggatcactgtggtgctcttccctggttcttgatgaagaccagctttcggggacgt
tgttttatgacgcacgccacgaaagccatttatcgctggatgctctcagattacataaaa
atcagcaatatatccaccgatcaaatgctatacacagaagccgatctggaggcgtccatg
gagaagattgagacgataaattttcatgaggaacgcgatgtgatgggcgtgcgtttctgc
gcctacaatgccggtcatgtgctgggcgcagcgatgtttatgatcgaaattgctggcatc
aagattctatatacaggcgacttttcgcgccaggaggatcgccatttgatggccgcagag
gtgccgccaaagaaaccggatgttctaataaccgagtccacatacggcacacacatccac
gagaagcgcgaagatcgcgagagtcgtttcacaacgctagtgcaaaagattgtccagcaa
gggggtcgctgcctgattccggtctttgccttgggtcgcgcccaggagctgctgttgata
ttggatgagtactggtcccagaatcctgatctgcacgagatacccatctattatgcctcc
tcgctggccaagaagtgcatggccgtctatcaaacgtacatcaatgcgatgaacgatcgc
atccgtcgccaaattgccgttaacaatccgtttgtctttcgtcacatttccaatctgaag
ggcatcgatcattttgacgatattgggccgtgtgtgatcatggcttcgcccggtatgatg
caatcgggcctgtcgcgcgaactcttcgaaagctggtgcacagatccgaagaatggtgtc
attatcgccggctactgtgtggagggcacactggccaagacaatactctccgagccggag
gagatcattaccctctccgggcaaaagctgccgctgaacatgtccgtcgactatatatcc
ttctcggcgcatacggactaccagcagaccagcgaatttatccgtctgctgcgacccaat
cacgtcgtcctcgtccacggcgaacagaatgagatgtcccgcctgaaactggcgctgcag
cgtgaatatgaagcggatgccagcacagacataaagttctataatccacgcaatacgcac
gccgtcgatctctatttccgcggcgagaagacagccaaggtgatgggtcatctggcggcc
aagaagccagaagtgggcagcaaactgtccggagtgctggtcaagcgcgatttcaaatac
catttgcttgcaccctcggatctgggcaaatacacggacatgagtatgtcagtggtgacg
cagcgccaatcgattccgtggtccagttcactgacgacactgcaactgctgttggatcgc
atcggcgctggctgcgtggagatcgttgagccggagcgcaagttgcgcgtcttcaactgc
gtcgaactgactgtggagcagaagatcattgtgatggaatggcatgcgacgcatgtgaat
gacgtctatgcggatgccgtgctcgcctgcctcatgcagtccgagctgggtggcacaaac
atcaagggcgccaccaagcagaccaaatcggaggagtcccgcttccgcgagtgcctcatc
gagacgctgcaggacaccttcggggacacctgtgtgccaaaaatgttcaagggcgatgtg
ctcccaattacggtcagcggcaaacatgccgaaatcaatctggagacactgactgttcac
tgtgccgaggatgaggtgttgcgccagatgcttaacaccaccttgcagaagctacatcaa
acactggtctccgcctattaa
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