Drosophila grimshawi: 6563477
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Entry
6563477 CDS
T01061
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
dgr
Drosophila grimshawi
Pathway
dgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6563477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6563477
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
6563477
U7-dependent histone pre-mRNA processing factors
6563477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_occluded
RRM_Rrp7
DUF8400
Motif
Other DBs
NCBI-GeneID:
6563477
NCBI-ProteinID:
XP_001990216
UniProt:
B4JEZ7
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFG
FCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDP
DDAPELITKTVASLPPEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRI
VDPQQALGMLFKANQMPPVLGGNPHPNPSVMPMIPTPQQQQQQQPPQQQPPPQSAVGGPG
PMPVPGPSFNNMHSNDIDLRMVSGGPASMDPRMIARNLDQDMRQVPGGPMPNPVPPPLMD
PRTRAQMQPQQQQQGPPAPSIPYPSDPRQRPMDPRLRGAMPPGPVQQQQQQPPPQVQQSV
TQQQQSAALQLQSRLGAHGVLPSDASDQEKAALIMQVLQLSDDQIAQLPPEQRASILVLK
EQIAKTRTAR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggcgcaggaacagagtattatggacaagtccatgcggtcggtgtttgtg
ggcaacataccctacgaggctaccgaggagaagctcaaggaaattttcagcgaagtcggc
ccggttctttccctcaaacttgtttttgatcgggagagcggcaaacccaagggatttggc
ttctgcgaatacaaggatcaagagactgcactgagtgctatgcgcaacctgaatggctac
gaaatcggagggcgaacgctgcgcgtggacaatgcttgtacggagaagtcacgcatggag
atgcaacagctgttgcagggaccacaagtggagaacccatacggcgagccctgtgatccc
gacgatgcgcccgaattgatcacgaaaacagtggcatctttgccgccggagcaaatgtac
gagctgatgaagcaaatgaaactgtgcattgtgagcaatccgtccgaggcgcgtcaaatg
ctcatgctaaatccccagctggcctatgcgctgctgcaggccatggtcgtgatgcgcatt
gttgatcctcagcaggcgctgggcatgcttttcaaggcgaatcaaatgccacccgttctc
ggtggcaatccacatcccaatcccagcgttatgccaatgataccgacgccacagcagcag
cagcaacaacagccgccgcaacagcagccacccccacaatccgctgtgggtggaccggga
cccatgcctgtgcccggtcccagctttaataatatgcattcgaacgatattgatttgcgt
atggtgtccggtggtccagccagcatggatccgcgcatgatcgcccgcaacctggatcag
gatatgcgtcaggtgccaggtggaccaatgcccaatccggtgccgccgccacttatggat
ccgcgtactcgcgctcaaatgcaaccgcagcagcaacagcaaggaccaccagcaccatcg
attccctatccgagcgatccacgccaacgtccgatggatccgcgtctacgtggcgccatg
ccgcctggaccagtgcagcagcagcaacaacagccgcctccacaggtgcagcagtcagtg
acacaacagcaacagtcggcggcactgcagctccagagtcgcctgggcgcccatggcgta
ttgccgtcggatgcctccgatcaggagaaggccgctctcatcatgcaggtgctgcaattg
tccgacgatcagattgcccagctgccaccggaacagcgtgccagcatcctggtgctcaag
gagcagatagcaaagactcgaacggcacgctaa
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