Drosophila grimshawi: 6563776
Help
Entry
6563776 CDS
T01061
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03008
Ribosome biogenesis in eukaryotes
dgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6563776
09123 Folding, sorting and degradation
03018 RNA degradation
6563776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6563776
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6563776
03009 Ribosome biogenesis [BR:
dgr03009
]
6563776
03016 Transfer RNA biogenesis [BR:
dgr03016
]
6563776
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6563776
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
6563776
Ribosome biogenesis [BR:
dgr03009
]
Eukaryotic type
Pre-60S particles
RNases
6563776
Transfer RNA biogenesis [BR:
dgr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
6563776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
6563776
NCBI-ProteinID:
XP_001990842
UniProt:
B4JHR5
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MGVPAFFRWLSKKYPCVIIECNENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGII
HPCTHPEDKPAPKNEEEMMIAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKEATEKRLEIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI
HDRLNNNPAWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNINSPPDVPIGAE
VKFIFVRLSVLREYLRKTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLPHLPSLEIREG
AVDRLVELYKKCVYKARDYLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQRREQQYKARQ
KRENHKALEQSAFGPMAVGRNNAAVDKIITNYKQEASAVRMGSNDSQGTKRSSTNANLDD
ADEEENNDEVRLWEDGFKNRYYESKFDVASGNLQFRYAVALQYVRGLCWVLKYYYQGCAS
WNWYFPYHYAPFASDFVNIQGLSTTFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAQLMS
KPESTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALGPLHIQLTDEEVQRNKR
GDNNLYISKCSPHFKTINKLYEAGDNSQLKNSPSSFDGMTGTISKSEINTALNGQLKSPI
PGLPDIMNNEVVTTVFMDPQYEDNYNFLAIRLPNAVDPPQVIQANDHKNGPVIGFGNNSQ
RAYIPPGGQRLLSSSMRTQRFDNGYQNNGRNGGNYNNPPPQGNYSNQSYNRPYNQRYQNN
NYQQRNNYNGPRHAPYRHPNRGNNSQHSNYRRF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggagtacccgcattcttccgatggctgagcaaaaagtatccgtgcgtcattatcgaa
tgtaatgagaacaagcaagtagatccggacacgggaaagaatatctacgaggatgcaacg
ttgcccaatcccaatggggtcgagttcgataacctctatctcgatatgaacggcattata
catccatgcacacatcccgaggacaaaccggcacccaaaaatgaggaggaaatgatgatc
gctattttcgagtgcattgatcgacttttcggcattgttcgccccagaaaactcctctat
atggctattgatggcgttgcgcccagagcgaaaatgaatcaacaaagatcccgaagattt
cgcgctgcaaaagaagcaaccgaaaagcgtttggaaattgagcgcattcgagacgaactt
ttaacacgaggctgcaaactgccgccggaaaaggagaagggcgaacacttcgactcgaac
tgtataacgccaggaacaccttttatggatagattaagtaaatgcctgcattactatata
catgatcgcctgaacaataacccggcatggaaaggagtaaaaattatattatccgatgcc
aacgtgcccggagaaggcgaacacaaaataatggactacatacggaagcagcgtgcacag
ccggatcatgatcccaacacgcaccatgtgctttgtggggctgatgcagatctgataatg
cttgggctggcgactcacgagccgaactttaccataattcgtgaggagtttctgcccaat
aagccacgaccatgtgacgtttgtaatcaatttggtcacgagatggacaagtgtgttggg
ctgagtgccgttggctccaataatataaatagtccacccgatgttccaattggagccgaa
gtgaaattcatatttgtccgattgagtgtgttgcgagaatatctaaggaaaactcttgaa
atgcccaatttaccgtttagctatgactttgagagagctctagacgattgggtattcatg
tgtttctttgtgggcaacgatttcttacctcatctacccagtttagagatccgagaaggt
gccgtcgatcgattggttgagttgtacaagaaatgcgtgtataaagccagagattattta
accaactcaggtgacgtcagtttggacagggttcaattaatcatgaccgacttgggcaat
gtggaggatcaaatattcaaagatagacaacgaagggaacagcaatacaaggccagacag
aaacgggaaaatcacaaagctttggaacagagcgcttttggaccgatggcagttggacga
aataacgccgctgtagataagataataacgaattataaacaggaagcatctgctgtacga
atgggatcaaatgattcgcagggcaccaaacgttcgagtacaaatgcaaatttagatgat
gcggacgaggaggagaataacgatgaagtgcgactttgggaggatggattcaaaaacaga
tattatgaatcgaaatttgatgtggcttctggtaatcttcaatttcgttatgctgtcgca
cttcaatatgtccggggactctgttgggttctcaagtactactatcaaggctgtgcttcc
tggaattggtattttccctaccattatgcgccttttgcgtccgattttgtaaatatacag
ggcctgtcgacgacattcgaaaaaggcacaaaaccgttcaatcctttggaacagctaatg
ggtgttttcccagcagctagcagctcacatgttccggaaccgtgggcacagctaatgtcc
aaacccgaatcaaccataattgatttctatccagaagatttcaaaattgaccttaacgga
aaaaagtttgcgtggcaaggagttgccctgctaccatttgttgatgaaaataggcttttt
aaggcgctcggacctctccacatccagttaaccgacgaggaagtacaacgtaacaaaaga
ggggataataatttgtatataagtaaatgtagtcctcatttcaagactataaataaactc
tacgaagctggcgacaattcccaattgaaaaacagtccttcatcattcgatggaatgact
ggaacaatttccaaatcagagatcaacactgcgttaaacggccagttgaagtcaccaatt
cctggtttgcctgatattatgaataatgaagttgtaacaactgttttcatggatccgcag
tacgaagataactacaactttctagctataaggctgcccaacgccgtggatcctccacaa
gttatacaggcgaacgatcataaaaatggacctgtcatcggcttcggaaataattcgcaa
agggcttacattcctccgggcggtcaaaggctattatcgtccagcatgagaacgcaaaga
ttcgacaatggatatcaaaataatggaagaaatggtggaaattacaataatcccccacct
caaggtaactattcaaatcaaagctacaataggccgtacaatcaaagataccagaataat
aattatcaacaacgtaataattataatgggccaagacatgctccataccgacacccaaat
agaggaaataattcgcagcattcaaattatcgacgattttaa
DBGET
integrated database retrieval system
