KEGG   Drosophila grimshawi: 6563967
Entry
6563967           CDS       T01061                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
dgr  Drosophila grimshawi
Pathway
dgr03030  DNA replication
dgr03410  Base excision repair
dgr03420  Nucleotide excision repair
dgr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6563967
   03410 Base excision repair
    6563967
   03420 Nucleotide excision repair
    6563967
   03430 Mismatch repair
    6563967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dgr03032]
    6563967
   03036 Chromosome and associated proteins [BR:dgr03036]
    6563967
   03400 DNA repair and recombination proteins [BR:dgr03400]
    6563967
DNA replication proteins [BR:dgr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    6563967
  DNA Replication Termination Factors
   ELG1-RFC complex
    6563967
Chromosome and associated proteins [BR:dgr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    6563967
DNA repair and recombination proteins [BR:dgr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     6563967
  Check point factors
   HRAD17(Rad24)-RFC complex
    6563967
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_lid_RFC1 AAA_22 Mg_chelatase AAA_11 AAA_assoc_2 DUF815 AAA_24 Rad17 SLFN-g3_helicase AAA_5 AAA_30 DNAX_ATPase_lid RuvB_N AAA_14 AAA_19 Gp44_lid bpMoxR ResIII nSTAND_NTPase5 AAA_7 AAA_28 AAA_3 Penaeidin AAA_25
Other DBs
NCBI-GeneID: 6563967
NCBI-ProteinID: XP_001990525
UniProt: B4JFV6
LinkDB
Position
Unknown
AA seq 356 aa
MQAFFKPGKANIGNSATDKQTINATAERRKPPAPWVEKYRPRSVDDVVEQSEVVAVLRKC
VEGADLPNMLLYGPPGTGKTSTILAAARQIFGDMYRERILELNASDERGINVVRTKIKNF
AQLTASSVRPDGRPCPPFKIIVLDEADSMTHAAQAALRRTMEKESRSTRFCLICNYVSRI
IVPITSRCSKFRFKALGETQIITRLQHICDLESVSIEPDAYQSIVKISGGDMRRAITTLQ
SCYRLKGAEHTINSDDLLEMSGIIPEHYLDDYLEVCRSGNYERLEHFVREIGYSAYSVGQ
MMEQFVEYVVRCGSLTDKQKAIICDKLGECCYRLQDGGSEYLQIMDLGCTIILALK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcaagcgttttttaaacctggaaaagcaaatattggcaacagcgccacggacaaacag
acaatcaatgcgaccgctgaacgccgcaaaccgccagcaccctgggtggaaaaataccgc
ccgcgaagcgttgatgatgttgtggaacaatcggaggtggtggccgtgctacgtaagtgc
gttgagggtgccgatttgccgaatatgctgctctatggcccacccggcacaggcaaaacc
agcaccattctggcggcggcacgtcaaatcttcggcgatatgtaccgcgagcgcatcctg
gagctgaatgcctccgacgagcgcggcatcaatgtggtgcgcaccaagatcaagaatttt
gcccagctaacggcgagcagtgtgcgtcccgatggtcggccgtgtccgccatttaagatt
attgtgctggatgaagcagactcgatgacgcatgccgcacaagcggctttgcgacgcacc
atggagaaggagagccgcagtacacgtttctgtctcatctgcaactatgtgtcgcgcatt
attgtgcccatcacgtcgcgttgctccaagtttcgcttcaaggcgctgggcgagacccag
atcattacacgactgcagcacatttgcgatttggagagcgtgtccatcgagcccgatgcc
taccagtcgattgttaagatctctggcggcgatatgagacgtgccataaccacattgcaa
tcatgctatcgccttaagggcgccgaacacaccattaactcagacgatctacttgagatg
tcgggcattataccggagcactatcttgatgactatcttgaggtgtgtcgctcgggcaac
tatgagcgcctggagcattttgtacgcgagattggttactcggcttacagcgttggccaa
atgatggaacaattcgtggagtatgttgtgcgttgcggttccctgacagacaagcagaag
gccatcatttgcgacaagctgggcgagtgttgttatcgactgcaggacggcggctctgaa
tatttgcaaatcatggatctgggttgcacgattattctggcgctcaagtga

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