Drosophila grimshawi: 6566411
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Entry
6566411 CDS
T01061
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dgr
Drosophila grimshawi
Pathway
dgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6566411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6566411
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6566411
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6566411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6566411
NCBI-ProteinID:
XP_032595129
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVGEGVETFEDIWKKVHNATNTNQKQKHLQEKYEADLKKEIKKL
QRLRDQIKSWIASAEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMD
PAQRIKDHARNWLTNSISALQIQIDQYESEIESLLAGKKKRLDRDKQERMDDLRSKLDRH
KFHITKLETLLRLLDNDGVEAEQVNKIKDDVEYYIDSSQEPDFEENEFIYDDIIGLDEVE
LSGTATTDSNNSNETSGSPSSVTSGGSPSQSPVTVQQILPSSSSSSNTQQQAATAGSSSG
AASGGTSAASAAQFQHLQAVAAAAAAAAASAAAQQSNGNNVGYASDTSATSSSATTSTEA
TTGGEKRNKSSESSANSSKAKQQPQQPIKPTPVRATAKAPAGSDTAQVNKIISSTPSKNQ
QQLPTVASVLASSGTQNNNNSNNNNNSSSSSSSSSIVAAIGHNPAVQPHAPTPGLNAVSV
AVSAGTAATAAAAAAAAVASASNNSSNNIQGQSVIQATPTIAFAAVAKHNTSLLENGPVL
QQQQPTAPTVAAIVSASAQAQQQQQQQQQQAAQLSNLQTNSSHLQNGLPVSLSSSSSGSS
NSSSNNNSNAVDAISLKTIAQEAINRSVIEPNSLNQQQASNIDTRQQQQQQQQQQQQQQQ
QQQQQQAAQQQAAAQQSLLQQHFSTETTANQQQQQQLQQQATAAAAQQQQQQNAAAAAAA
VAAIGTIVSATSNGPTAGSGLMNLANAAGQPTSGSGGVVVAPNAKTHTPQQQQQQQQQQQ
QQQQQQQQQQQQIATTEAHIPPLLGVTPLGPTPLQKEHQLQFQMMEAAYYHLPQPIDTEK
LQTYFHRSPVQTPAHYPQVSQAQLPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKA
LKKQSWRFHTKYMMWFQRHEEPKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDK
ELI
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaaattgcaaggcgaaattgatcgatgtttaaaaaaggttggcgag
ggcgtggaaacgtttgaggatatttggaaaaaggtacacaatgcaacaaacactaaccaa
aagcaaaagcacctgcaggagaaatatgaggcagatctcaaaaaggaaattaagaagctg
caacggttacgagatcaaatcaaatcatggatcgcatccgccgaaatcaaagataaaagc
gccctgcttgagaatcggaggctcattgaaacgcaaatggaacgctttaaggtggtggaa
cgggagacaaaaacaaaagcttattccaaggagggtttgggcgccgcacaaaaaatggat
ccagcgcaacggatcaaagatcatgcgcgcaattggttaaccaattcaattagtgcactg
caaattcaaatagatcagtacgaaagcgaaattgaatcgctgttggcgggcaaaaagaaa
cgtctggatcgcgataaacaggaacgcatggacgatttgcgtagcaaactggatcgtcat
aaattccatataaccaaattggaaacgctgctccgactgctcgataacgatggcgtcgaa
gcggagcaagtgaacaaaatcaaggacgatgtcgaatattatattgattcatcgcaagag
ccggactttgaggagaacgagttcatctatgacgacattatcgggctcgatgaagtcgaa
ttgagcggcacggcaacaacggacagcaacaatagcaacgaaactagcggctcccccagc
agcgtcacatccggcggcagtccatcccaatcgccagttacagtgcaacagatattgccc
agctcctcctcctcgtccaacacacaacagcaggcggcgacggcgggcagcagcagcggc
gctgccagtggcggcacaagcgcggccagcgcagcccaattccagcatttgcaggcagta
gcggctgcagcagcagcagccgctgcctccgctgcggcacagcaatcgaatggcaataat
gtgggctatgcgagcgataccagcgcaacttcatcctcagcgacaacgtccaccgaggcg
acaacaggtggtgagaagcgcaacaaaagcagcgaaagcagtgccaacagcagcaaagcc
aagcagcaacctcaacagccgatcaagccgacgccagtgcgtgccacagcgaaagcgccc
gcgggtagtgatacagcgcaagtcaataagattatcagctcaacgcccagcaaaaaccag
caacaactaccgacggtcgcttccgttttggcatcgagcgggacacagaacaacaacaac
agtaacaacaacaataacagtagcagcagcagcagtagcagcagcattgtcgctgcaatt
ggtcacaatcctgccgtgcaaccacatgccccaacgcctggcctgaatgcggttagcgtt
gcagtctccgccggcacagcagcaacagcagcagcggcagcagcagcagccgtcgcttcg
gcgagcaacaacagcagcaacaacattcaaggccaatctgtgattcaagcgacaccaaca
attgcatttgcagcggtggctaaacacaacacatcactactggaaaacggacctgtgctg
cagcaacagcagccaacagcgccaacggtggccgcaattgtcagcgccagcgcacaggcc
caacaacaacaacagcagcagcaacaacaggcggcgcaattatccaatcttcaaacgaat
tcctcacatttgcaaaacggcctgcccgtctcactcagtagtagcagcagcggcagcagc
aatagcagcagcaacaacaacagcaatgctgtcgatgcgatttcattgaaaactatagca
caggaagcaattaatcgatccgtgatcgagcccaattccctaaatcagcaacaggcaagt
aacattgacacgagacagcagcaacaacagcagcagcagcaacaacaacaacagcagcag
caacaacaacaacaacaggcggcgcagcagcaagcggcggcgcagcaatcgttactgcaa
cagcatttcagcaccgaaacaactgccaaccagcaacaacaacagcaacttcaacagcaa
gcgacggctgcagcagcgcaacagcagcagcaacaaaatgcagcagcggcagcagcagca
gttgcagcaattggaacaatcgtttctgccactagtaatggtcctacagctggcagtgga
ctcatgaatcttgcaaatgctgccggtcagccgacaagcggcagcggtggtgtcgttgtt
gcacccaatgctaaaacgcatacaccgcagcaacagcagcaacaacaacagcagcagcag
caacaacagcagcaacaacaacagcagcagcagcaaattgcaacaacagaggcgcacata
ccaccgctgctgggcgtaacgccgctgggtccgacgccactgcaaaaggaacatcaactg
caattccaaatgatggaagccgcatattatcacctgccacagcccattgatacggagaag
ctgcaaacatattttcatcgctcaccagtgcaaacgccagcgcactatccccaggtgagt
caggcacagctgcccatctacgataccgttgaattctatcagcgactctcaacggagacg
ctcttctttgtgttctactacatggagggctccaaggcgcaatatctcgctgccaaagcg
ttaaaaaagcagagctggcgcttccacaccaagtacatgatgtggtttcaacggcacgag
gagcccaagatcatcaacgatgattacgaacagggtacgtacatctactttgattatgag
aaatggagtcagcgcaaaaaggagggcttcacctttgaatacaagtacttagaagacaag
gagctgatttga
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