Drosophila grimshawi: 6566415
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Entry
6566415 CDS
T01061
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dgr
Drosophila grimshawi
Pathway
dgr04140
Autophagy - animal
dgr04142
Lysosome biogenesis
dgr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
6566415
04140 Autophagy - animal
6566415
04148 Efferocytosis
6566415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgr04131
]
6566415
Membrane trafficking [BR:
dgr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
6566415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
VPS18_solenoid_2nd
Clathrin
zf-RING_Vps41
WD40_WDHD1_1st
WD40_CDC20-Fz
zf_RING_Vps8
WD40
TPR_7
WD40_Prp19
Vps39_1
TPR_12
Beta-prop_THOC3
Beta-prop_IFT122_1st
zf_RING_Vps8_fungal
Beta-prop_HPS5
zf-RING_5
zf-RING_11
zf-C3H2C3
Beta-prop_WDR5
Beta-prop_EML_2
zf-RING_UBOX
TPR_2
zf-ANAPC11
TPR_10
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
6566415
NCBI-ProteinID:
XP_032595518
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MAETLPINSDSGTDEEEEEVEPKFKYQRIGNDLRNILNTDVVTCSAVHSKFLIFGTFLGR
VYLLDHKGNSVESNLSSGDRHTHSVAVNHIDVDPKGEYVATCSDDGSFKITGLFSCENNQ
NLNYGKNIKAVALDPEVKSGGRRLIVGDDKLTLYERNLIKKLKPSVLSTAEGSVLSICWQ
GNFVAWASHLGVRVYDLSEKCSLGLMKWEVPPQARLENFRCHLRWSNANTLLIGWVDTIR
ICVIRRRNTIEASSSNLPGYVVDPVSTFPTTFYICGLAPLVANQLVVLGYRKERSATYKA
LRPVLCVIEYKMNTCEDVCTDSLTLRGFEEYTVNDYSLGCIIEENRYFIVAPKDIVVASL
IERDDRVEWLIEHNKFEEAMEICKHGGSLPLLSVARLYINHLLTLKQYDKAAEICHRELG
NNKALWEEEVFKFVKCQQLRCISAHLPTTDDCKLDPHVYEMVLYEFLKFDVNGFLNLIKK
WPPKLYDGLAVINAIYDHFRKSNAKELLESLALLYCYQGDYESALRMYLRLKNEDVFELI
RRFELYDVISKLIIPLIELDQKRAFEILLDKNKIKPAVVVNQLEQNQEYLYRYLDELDKI
DRSGTFHQKLVGLYAKYDRSKLLPFLRRSNDYAIQEALAICKRESFHPEMVYLLGRMGSV
VEALNIIIHSIKDIEMAIEFCKEHNDDDLWNILIEESTKQPEIVTKVLDGIVDYVNPVLV
VSKIKLGQTIPNLHQSVVKMLWHYNIEQEVNTIAHQIQLADQFDTHAEVVAIQRRGHQVS
YDKVCPKCTRSVIVKGTAPPNGLTIFNCGHIYHNNCVIENRCDECLDWESLVEEGGSQ
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactttgccaattaatagcgactcgggcaccgatgaggaggaggaggaggtg
gaaccaaagttcaaataccagcgcattggaaatgacctgagaaatatactcaacacggat
gttgtgacctgcagtgccgtccattcaaagtttctcatatttggcacattcctcggtcga
gtctatctgctggaccacaagggcaactccgtggagtccaacctgagcagcggagatcgt
cacactcactccgtcgctgttaatcacatcgatgtggatcctaagggcgaatatgtggca
acatgctccgatgatggcagctttaagattactggtctgttcagctgtgaaaacaaccaa
aatctgaattatggcaagaatattaaggcggttgccttggatcccgaagtcaagtcgggc
ggacggcgcctcatagtgggtgatgataaactcactttgtacgaacgcaatctgatcaag
aaactaaagccgagcgtgctgtctaccgctgagggtagcgttttgtccatttgctggcag
ggcaactttgttgcctgggcgagccatttaggtgtgcgtgtgtatgatctgagcgagaag
tgctcgttgggtctgatgaaatgggaggtgccgccacaggcgcgtctcgaaaactttcgc
tgtcatctgcgctggtcgaatgccaatacgctgctaatcggctgggtggatactatacga
atttgtgtgatacgcaggcgtaacacaattgaggcatcctcaagcaatttgcccggctat
gtggtggatccagtctcaacatttcccaccacattctatatctgcggacttgcaccgctg
gtcgccaaccagctggtggtgcttggctatcgcaaggagcgcagtgccacatacaaggcg
ctgagacccgtgctctgcgtcatcgagtacaaaatgaacacgtgcgaggatgtttgcaca
gacagtctcaccttgcgcggcttcgaggagtataccgttaacgattacagcctcggctgc
atcatcgaggagaatcgctacttcattgtggcgcccaaggacattgtggtggctagcctc
attgaaagagacgatcgcgtcgagtggctaattgagcacaataaattcgaggaggccatg
gagatatgcaagcatggcggcagcttacccctcctatctgtagccagattgtatattaat
catttgttgacgctgaaacaatacgacaaagccgccgaaatttgtcaccgagagctgggc
aataacaaggcgctgtgggaggaggaggtcttcaagtttgtcaagtgtcaacaattgcgt
tgcattagcgcccatctgcccaccaccgatgattgcaaactggatccgcatgtctacgaa
atggtgctctatgagtttctcaaatttgatgtgaacggtttcctcaatctaatcaagaag
tggccgcccaagctgtacgatgggttggctgtcatcaacgccatttacgatcattttcgc
aaatcgaatgccaaggagctgttggagtccttggcattattatactgctatcagggcgac
tacgagagtgccttgcgcatgtacttgagattaaagaacgaagatgtctttgagctaatt
cgtcgctttgaactatacgatgtcatctcaaaattaatcattccactcattgaactggat
cagaaacgtgcctttgaaatattattagataagaataaaatcaaacccgctgtcgttgtg
aatcaattggaacaaaatcaggaatatctctatcggtatctggatgagctggataagatt
gataggtctggcacattccatcagaagctagttgggctgtatgccaaatatgatcggtcc
aaactgttaccctttctgcgacgctccaatgattatgccatccaggaagcgctggcaatt
tgcaagagggaaagttttcatccagagatggtctatctgctgggtcgcatgggcagtgtg
gtggaggcactcaacataattatacatagcataaaagatattgagatggcaattgaattt
tgcaaggagcacaatgatgacgatctgtggaacatacttattgaagagtccaccaaacag
ccagaaattgttacaaaagtgctcgatggcattgtggattacgtgaatcccgtgcttgtc
gttagcaaaatcaaattgggtcaaacaataccgaatctgcatcagtcagttgtgaaaatg
ctctggcactataatatcgagcaggaagtgaacacaattgcacaccagatccaattggcc
gaccaatttgacacacacgctgaggtggtggccatccagcgacgtggacatcaagtgtcc
tatgataaagtgtgcccaaaatgtactcgatcagtgatcgtaaaaggcacagctccaccc
aatggtttaacaatattcaattgtggccacatttaccacaacaattgtgtgattgaaaat
cgttgtgacgagtgtctggactgggaaagtttagtggaagagggtggtagtcaatag
DBGET
integrated database retrieval system
