Drosophila grimshawi: 6566579 Help Entry 6566579           CDS       T01061                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism dgr  Drosophila grimshawi Pathway dgr03013   Nucleocytoplasmic transport dgr03040   Spliceosome Brite KEGG Orthology (KO) [BR:dgr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6566579   09122 Translation    03013 Nucleocytoplasmic transport     6566579  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dgr03019]     6566579    03041 Spliceosome [BR:dgr03041]     6566579 Messenger RNA biogenesis [BR:dgr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      6566579 Spliceosome [BR:dgr03041]  Complex C   Other components    EJC/TREX     6566579  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     6566579 BRITE hierarchy SSDB OrthologParalogGFIT Other DBs NCBI-GeneID:  6566579 NCBI-ProteinID:  XP_001993171 UniProt:  B4JQB6 LinkDB All DBs Position Unknown AA seq 1689 aa AA seqDB search MRRLKKLSKSHSVTGTLETDAAPTSTETSATTTILGGDAAATTMTANGGAGAGAGGGETL FNVDIFKHFDKTGRSEFIKYLKQQLQESPESPVFDKHGAFKQGISNAIYELLWQALRFKL KKDVVLHALTDVVALHKEFPSLILDVVNILDSETSLMTEGLQEERHGFVQIVKDLDKVLP EALLKERLEIDTLQEVGIVKNKSFYTKFIKVKTKLYYKQRRFNLFREESEGFAKLITELN QDFEEHTTPDVIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWKLFIPLLRSYMPTGS IICEVLGYKFCHFKASRTPRSLHHVCALLLKHGVIELNDIYVWLAPNDGSIRAIWDEELA EAREMVRKLHVISTNKKDDDKEPPPPPTTKKFDEDKYNANQKFGLCEALLKVGDWENAYK IIQKLPDQSVVVQDPIARAIVELVHLSVEHIYYKRCFKAPAGRKPSRNRLYDDASLVAKM QVREFADLRKYTWPMANVLGPAMHCDTILMYKLVRIMGSVLHDMGVDSLNGPPPNTDQEQ QYYDIISCLDACILPSLLYLDCNCPMSEEIWSVLKFFPYHLRYSLYGRWKNDSYQLHPNL IRRCGLAQRDIKALMKRVSKENVKPLGRLVGKYSHCAPGLLFDYILVQIQMYDNLIGPVC DMLKYLTNLSFDCLGYCIIESLTMTGRGRFKDDGTSLSLWLQSLASFCGNIYKKYSIEMS GLLQYVANQLKSQKSLDLLVLRELVHKMAGVESCEEMTNDQLQALCGGEQLRGEAGYFSQ VRNTKKSSNRLKEALANNDLAVTLCLLMAQQKHCVIYRETAAHSHLKLVGSLYDQCQDAL VQFGTFLGSTYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKAD PNAKKLTTTQKLQKYLDATQLIMNPIVESVRPLHSAKVWEDISPQFLVTFWSLSMYDLHV PNEIYQREIGKLKQLAQQAADGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKTLQ RLQEQKDGWFLLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVQTIHNLKTANF STLLCYDRLFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHSDQAVFNKECANYPGFV TKFRVSNQFSDTNDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILP HYPVLSKLEQIIERKVDKVREEEKTQRPDLFAIATSYIGQLKLKTPHMFKESDFHQVAER PAKDSVPSSPVSNAKVLSTEKTAATAAAATATTTTSMTPTKPATISSSFYSNEQKTAGGK EQQDAKAGGAVRGEVKLSKTDGSSTTTVTSISKSISAPATSERERESKRDAIGGGTGSTQ SHRSNDVKDELQSSSSGANNNNSSNNNNTSSSNGSEQRRSRELERERERERDREERHSLS STRSSQRPSNNKEGRIELRTEAELQQRARERTQRLEELEAATLRAHKREKLSRRDERSQH RHDGVETVDLVTGSGSSSQEHLRSHYEEYEGRQRDRDLSSVSNESNGSLQHRRSHETIEY DKDSKRRKMESSSSSSKKVEELVDSVKKARGLKTKERNKDKMSDEERDARRDRKMGRKRD RNEESGSGDHKRRREAQNGDDDLRERERHRDKSSRERSHEKFDRERGGSSRGDDRQYGSK SSRFSRINY NT seq 5070 nt NT seq  +upstreamnt  +downstreamnt atgcggcgcttgaagaaactgtccaaaagtcacagtgtgacggggacgctagaaactgat gcggcgccgacgtcgaccgagacatcggcaacaacaacaatattggggggagatgcagca gcgaccacgatgactgcgaatggtggagcaggagcaggagcagggggaggagagacttta ttcaacgttgatatattcaagcatttcgataaaacgggcagaagtgaattcataaaatac ctgaagcaacagctacaggagagcccggaaagtcccgtctttgataagcatggagcattt aaacagggcatctcaaatgccatatatgagctgctgtggcaagcacttcgcttcaagctg aaaaaggatgttgttttgcatgcgcttaccgatgtggtcgctctgcacaaggaatttcct agtctcatattggatgtggtgaatatattggacagcgagacatcgctgatgaccgaggga ctgcaggaggagcgacatggatttgtgcaaattgtcaaggatctggacaaggtgctgcca gaggcattgctgaaggagcgactggaaattgatacgctccaagaagtgggcattgtgaag aacaaaagtttctacaccaaattcatcaaagtgaaaacaaagctatactataagcagagg cgttttaatctctttcgcgaggagagcgagggctttgccaagctgatcacagaattgaat caagattttgaggagcacaccacacccgatgtcatcatggacatcatcaaatcactgata ggttgctttaatctggatccgaatcgtgtgctggatattataattgagtcctttgagacg cggcccgatcgctggaagctatttataccgttgctacgcagctatatgcccactggctcc ataatatgcgaagtactcggctacaaattctgccattttaaggcgtcgcgcacgcctcgc tccttgcaccatgtctgtgcactgctcctgaagcacggcgtcatcgagctaaatgatatt tatgtgtggctggcgcccaacgatggcagcatacgtgcaatttgggatgaggaattggca gaggccagggaaatggtgcgcaaacttcatgtgatctccaccaacaaaaaagatgacgac aaggaaccaccaccaccacctacaactaagaaattcgatgaggacaaatacaatgctaat caaaagtttggtctatgtgaggcgctgctcaaggttggcgactgggaaaatgcgtacaaa attatacaaaagctgccggatcaatcggttgtggtgcaagatccgattgcacgtgccatc gtcgagcttgtgcatctttctgttgagcatatctactacaagagatgcttcaaagcgccc gccggccgcaaacccagtcgcaatcgtctgtacgatgatgccagcctggtggccaagatg caggtccgcgaatttgccgatctacgcaagtatacgtggcccatggcgaacgttttgggt ccggcgatgcactgcgacacgattctgatgtacaaactggtgcggatcatgggcagcgta ttgcatgacatgggcgtggatagtttgaatggtccgccgccgaatacggatcaggagcag cagtactatgacatcatcagttgcctggatgcgtgcatattgccctcgctactctatttg gactgcaattgtcccatgtccgaggagatttggtccgtactcaaattctttccatatcac ttacgatacagtctgtacgggcgctggaagaacgacagctatcagttgcatccgaatctt atccgccgttgtggtctggcgcagcgggacatcaaggcgctgatgaagcgcgtcagcaag gagaatgtcaaaccgctgggacgacttgtcggcaaatacagccattgtgcgcctggactg ctctttgattatattcttgtgcagatccaaatgtatgataatttaattggacccgtttgc gatatgctcaaatatttgacaaatttatcatttgactgcctcggatactgcatcattgag tctctgaccatgacgggtcgtggtcggtttaaggacgatggcacctcgctctcactgtgg ctgcaaagtctcgcctcgttctgtggcaacatctacaagaagtatagcatcgaaatgagc ggcctgctgcagtatgtcgccaatcagctcaagtcgcagaagagtctcgatctgcttgtg ctccgggaactcgtccacaaaatggccggtgtcgagtcctgcgaggagatgaccaacgat cagctgcaggcgctctgcggcggcgagcaattgcgtggcgaggctggctactttagtcag gtacgcaacacgaaaaagtcatcgaatcgcttgaaggaggcattggctaacaatgatctc gccgtcacactttgcctgctgatggcccagcagaagcactgtgtcatctatcgggaaacg gcagcgcatagccatctgaagctggtgggcagtctgtatgatcagtgccaggatgctttg gtgcagtttggcacatttctgggctccacttattcggtggatgagtacgtggaacgcttg ccatcaattatcacaatgctgcgcgaatatcacatcaatacggatgtcgcattcttcctc gcccggcccatgttcacgcatcagattaaccaaaaatatgatcaattacgcaaagcggat cccaatgctaagaagctgacaacgacacaaaagctgcaaaagtatctggatgccacgcaa ctgattatgaatcccattgtggagtcggtgcgtccgctgcacagtgccaaggtgtgggag gacatcagtccacagtttctggtcacattctggagcctgagcatgtacgatctgcatgtg cccaacgagatctatcagcgtgagattggcaagctcaaacagcttgctcagcaagctgcc gatggcaaagattcgaatcagtccaagaacaaaaaggagcaagagcgttacatagcgctc atggagaaactgaatgatgagcgcaagaagcagcatgagcatgtggataagacgctgcaa cggctacaggagcagaaggatggttggttcctgttgcgttcggccaaatcggcgaagaat gatacgattacacagttcctgcagttgtgcctctttccgcgctgcaccttcactgccctg gatgcactctattgtgccaagtttgttcaaaccatacacaatctgaagactgcgaatttc tccacgctgctctgctacgatcggctcttttgcgacattacgtactcggtgacatcctgc acggagggtgaggcgacgcgatatggccgctttctgtgtgccatgctggagacggtgatg cgctggcattcggatcaggccgtgttcaacaaagagtgcgccaattatcctggctttgtg accaagttccgcgttagcaatcaattctcggacaccaacgatcatgtgggctacgagaat tatcgtcatgtgtgccacaagtggcactataaaatcaccaaagcgattgtgttctgtctg gactcgaaggactttatgcagatacgcaatgcgctcatcatattgatgcgcatcttgccc cactatccggtcctctccaagctcgagcagatcattgagcgcaaggtagacaaagtgcga gaggaggagaagacgcagcgtcccgatttgtttgccatcgccaccagttacattggccag ctgaagctgaagacgccgcacatgttcaaggagagcgatttccatcaggtggctgagcgt ccggccaaggacagtgtaccctcatcgcccgttagtaacgccaaggtgctctccacggag aaaacagcagcaactgctgctgctgcaactgccacaacaacaacgtccatgacaccaacg aaaccagccactatttcatcctccttttacagcaacgaacaaaagacagctggtggcaaa gagcagcaggacgctaaggctggtggcgcagtgcgaggcgaggtgaaacttagcaaaacg gatgggagcagcactacaacggtgacttccatctcaaagtccatttcggcgccggcgaca agcgagcgtgaacgcgagagtaaacgggatgcgatcggaggaggaacaggatcaacgcaa tcgcatcgcagcaacgatgtcaaggacgagctgcagtcgagcagcagtggtgccaacaac aacaacagcagcaacaacaacaacacgagcagcagcaatggcagcgagcagcgacgcagt cgtgagctggaacgtgaacgcgaacgcgaacgggatcgggaggagcgtcacagcttgagc agcacacgcagctcgcagcgtccaagcaacaacaaagaaggtcgcatcgagttgcgcaca gaagcggagttgcagcagcgggcccgggaacggacgcagcggcttgaggagctggaggcg gccactctgcgcgcccacaagcgcgagaagctatcgcgtcgcgatgagcgcagtcagcat cgacacgatggcgtcgagacggtggaccttgttacgggcagcggcagcagcagccaggag catctacgtagccactacgaagagtacgagggacgccagcgagatcgtgatctgagttcg gtgtccaatgagagcaacggttccctgcagcatcgacgcagtcacgagacaattgaatat gataaagattctaaacgtcgtaaaatggaatcgtcgtcgtcaagttcaaagaaggttgag gagctcgtagatagtgtgaagaaggcgcgaggcctcaagaccaaagagcgcaacaaagac aagatgtccgatgaagagcgcgatgcgcgcagggatcgcaagatggggcgcaaacgggat cggaacgaggagtccggcagcggcgatcacaagcgtcggcgcgaagcacaaaatggcgac gacgatttgcgcgaacgggaacgccatagagataaatcttcccgtgagcgttcgcatgag aaattcgatcgggaacgcggcggcagctcgcgtggagatgatcgacagtatggctcgaag tcgtcacgcttctcgagaattaactactga

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