Drosophila grimshawi: 6567598
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Entry
6567598 CDS
T01061
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dgr
Drosophila grimshawi
Pathway
dgr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6567598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6567598
03036 Chromosome and associated proteins [BR:
dgr03036
]
6567598
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
6567598
Chromosome and associated proteins [BR:
dgr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
6567598
PBAF complex
6567598
GBAF(ncBAF) complex
6567598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6567598
NCBI-ProteinID:
XP_001994213
UniProt:
B4JT59
LinkDB
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Position
Unknown
AA seq
1263 aa
AA seq
DB search
MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILF
LQYVEAKLGKTSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKN
PTRKDPNIQLLIEIEQALVEADLYRIPYIFIRPEIEKSFEARLREILDNRRVEIVTDEED
ATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPA
ERWRVAASWILDLEQYNEWMTEDDYEVDEQGKKKMHKQRMSIDDIMSFGDDKKKPTTTSS
SSGGGTTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKLRNDDDDEDLTRDLDDPPAE
PNIQEVHKATHSTLQSTASPAPGNKSRGDNDMMPIKGGTMTDLDDEMTGGSGAQALSTGD
GDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMP
EFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQW
GLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLG
KEGGVMECDKSAGAGGAGVGGGLGIKAETLENGAASGLASGVSQFGLKLDQYAKKPAAMR
NRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLE
DDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPAT
IMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDDESKDGNNSSSSAPGHDEEMKD
LNKKDDDAKSKDKTKSDKLNTNTTDSSSTSTTTTTSTTSATSTTTSTSSTTATTTTTSNT
PTTNNTDKKSKDSGGDKANKTSDIKPSNNNASNKTASNSSPTETGTTNSDAEIKTEDNSG
DGESKDASNDASGGGSASAKDGGGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSL
VALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRAR
QQAHHRLQQELQQQGQQAAGAPAPGAMILPPQQQQAAQQQQQQSLPPPPPHHHQQQQPPP
PQQQQALPQQLQNQPQSLAAPSAQHQPLPPHIAAVAPPNGAPFAAPPVATPTVAAAPPPA
VGELPPAAVAQAQAPTPMDTTPPAIAPPVAEVSGVAAAAASAASAPSIPAASVGAAVNPP
PST
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactcggtcctaaaaaggacggaagtcccaacatcgactttttccaatcgccg
gagacgctgcaaggcttcgagtccatacgacaatggctacaaaagaattgtaaaaagtac
ttggcgcacagctcggagccgatcacaaaggagtcacttgcccaactgctaatacttttt
ctgcaatatgtggaggcgaaattaggtaaaacctctgctgaaccgccggcgacgagaatc
ccgatgcgctgttttctggattttaaaaacggtggtggtctctgcatcattttctcgacc
atgtttcgctttcgagccgagcaacgtgggaaaaaatttgacttttccattggcaagaat
ccaacacgcaaagatcccaacatacaactgctgatcgagatcgaacaggcacttgtcgag
gccgatctctatcgcataccctacattttcatcaggccggagatcgagaagagctttgag
gcgcgtctgcgtgagattcttgacaatcgacgtgtggagatcgtcaccgatgaggaggat
gcaacgcacattgtctatcctgttgtggatccacatcctgatgagtacgctcgtcctatt
tttaagcgtggcaatcatgtcatgcttcactggtactattttcccgaatcctatgactcg
tggactctaaatagcttcgatttgccggacaatataccggagaatccggaatcacctgca
gaacgctggcgagtggccgcctcttggatattggatctggagcagtataacgagtggatg
accgaggatgattacgaggtggatgagcagggcaaaaagaagatgcataagcaacgcatg
tccatcgatgacatcatgtcctttggcgatgataaaaagaagccaaccaccaccagcagc
agcagcggtggtggcaccaccggcaagcagaaacgacgccgctcgccgtcgcccacaact
tccacatcgacatcgaagccgggcaagcgaaagcgttccccggccgtcatacacaagaag
ttacgcaatgacgacgacgacgaggatctcacccgggatctggacgatccgccggctgag
cctaatatacaggaggtgcacaaggcaacgcattcgacgttacaatcaacagccagccca
gcgccaggtaataaatcccgtggtgacaacgatatgatgcccatcaaaggtggcaccatg
accgatctggatgatgaaatgactggcggcagtggcgctcaagctctgtccaccggtgac
ggtgacaattcgcagacgggcaagacaagcgataatagcaatacgcaagagttctcatcc
tcggccaaggaagacatggaggacaatgtgaccgagcagacgcatcacatcattgtgccc
tcatattcggcctggttcgattacaactcaattcatgtgattgagaagcgcgcgatgccc
gagttcttcaatagcaagaacaagtcgaaaacgcccgagatttacatggcctatcgtaac
tttatgattgacacttacaggttgaatcccacagagtacttgaccagcaccgcttgccgt
cgcaatttggccggtgatgtgtgcgccataatgcgtgtgcacgccttcctcgaacaatgg
ggtctcatcaactatcagatcgatgccgatttgcgtcccacgccaatggggccgccaccc
acttcgcactttcacattttgtcggatacaccgtctggcttgcaggcgatcaatccgcaa
aagacacagcagccgtcggcggccaagacactgctcgatttggacaagaagccgctaggc
aaggagggtggcgtcatggagtgtgacaagagcgctggcgcaggcggcgccggtgttggc
ggtggcttgggcatcaaggcagagacgctagagaatggcgccgccagcggtttggcctct
ggggtcagtcaatttggactaaagttggatcagtatgccaagaagccggcggcaatgagg
aatcgcacggcggcgagcatgtcgcgcgagtggaccgaccaggagacactgctgctgctc
gagggactcgagatgcacaaggatgactggaataaggtgtgcgaacatgttggcacacgc
acccaggacgagtgcattctgcactttttgcgtctgcccatcgaggacccgtatttggag
gacgatggcggtttcttgggtccgcttggctgccagccaattccatttagcaaatccggt
aatcccatcatgtcaacagtcgcatttctcgcatctgtcgtcgatccgcgcgtcgcagct
gctgctgccaaggcagccatggaggagtttgccgcgattaaagatgaggtgccagccacc
attatggacaaccatatgaagaacgtggagaaggcctcggccggcggcaaattcaatccc
aatttcggtctggccaacagcggtattgctggcacaggcaatgacaaggacgatgacgaa
tccaaggatggcaacaacagcagctcttcggcacctggccacgatgaggaaatgaaggat
cttaacaagaaagacgacgacgccaagtccaaagacaaaacgaaatcggataagctcaac
acaaacaccacagactcaagttccacatcaacaacaacaacaacatcaaccacatcagcc
acatcaacaacaacatcaacatcatcaacaacagctacaacaacaacaacaagcaacacg
cccaccaccaataacactgataaaaaatctaaagattcaggcggcgacaaagccaacaaa
acaagcgacatcaaaccgagcaacaacaacgcctcaaacaaaacggcttccaactcctca
cccacagagactggcaccaccaacagcgatgcggagatcaaaacggaggacaatagcggc
gatggcgagtccaaggatgccagcaacgatgccagcggcggcggcagtgcctccgctaag
gatggtggaggcgccttcagcgagaacaatatgcaaacggcagcggcggctgctctggcc
tctgctgccgtcaaggccaaacatttggcggcgctggaggagcgtaagatcaagtcactg
gtcgcgctgctagtggagacgcaaatgaagaagctagagattaagttgcgccactttgag
gagctggaggcgaccatggagcgtgaacgtgagggactcgaataccagcgacagcagctc
atcactgagcgccagcagttccacctggagcagctgaaggcggccgagttccgagcccgc
caacaagcgcatcatcgcctgcaacaggagctgcagcagcagggacagcaggcggcgggc
gcacccgctccaggtgcaatgatcttgccgccgcaacagcaacaggcggcacagcagcag
cagcagcagtcgctgccaccgccgccaccccatcaccaccagcagcagcagccgccgccg
ccgcagcaacaacaagcgctgccacagcaattgcagaatcagccccaatcgctggcagca
ccctcggcgcagcatcagccgttgccaccgcacatagctgctgttgcaccgccgaacggt
gcaccatttgcggcgccgccagtggcgacgccaaccgtggccgcagcgccgccgccagct
gttggcgagctgccgcctgcagctgtggcccaagctcaggcgcccacgccaatggacact
acaccgccagctattgcaccacctgttgctgaagtctctggcgtggcagctgctgcagcg
agtgctgcgtctgccccaagcattccggcggcaagcgttggcgctgctgtcaatcctccc
ccttcaacttaa
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