Drosophila grimshawi: 6569091
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Entry
6569091 CDS
T01061
Name
(RefSeq) uncharacterized protein LOC6569091
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dgr
Drosophila grimshawi
Pathway
dgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6569091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6569091
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6569091
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6569091
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
6569091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6569091
NCBI-ProteinID:
XP_001995143
UniProt:
B4JW77
LinkDB
All DBs
Position
Unknown
AA seq
2093 aa
AA seq
DB search
MEHILQSYPEDARRIGEEYLSSLTDLNCNSKPLINMLTMLAEENINFAQIIVRVVEYHIS
QVPPEFKLPILYLIDSIIKNVKSSYVQLFGQCIVNIFLNAFESVQHSPSSVLEKVRERMY
LLRQTWNEVFPPTKMYALDVKVKRLDNNWPITAKPIQPNKIHVNPAIHVNPDFLKTGMVS
MPLTKELPMEEMLQVKTRELLELKKRKLELELEQTNMHLMQQERQIHQTADTIGVAPPGM
GMPAPVVAALRPPGMEPAATVVPPMYPGSSIRPPVRPMMPVVGQQSSFANKPKVHPVNPA
MVNTVRPRDPRLARQMQPQQMAAPVMRSVADPRLVDGSHKSGSAISAHKSSRSRSKSPTR
SSSKSKSSSSSNHHSSSSSNRKRSESKSSTSSSGSGDGTRHKISNISSQSPTKRSSSSRY
AHNGNGNSPASSSTTSSSSKRKSSSPAAASSSSNSPLKSMKRNQSTHNKNTHTTSRSKSS
AASNERSSRSRSPVYSRDVDMRSVERSKSPEPKAATATQGATPAAAAPSTETTQPEATAA
APANDLEKRPRPSTSPHIDASSMDVDLRPMNFAQLAALSSIIRPTTPPPPAITTATVSKK
ATTTTITADTSSTTTNASSASNATATTTSNSCSSSKLPTKVSFKIQKPFNKLEKSTANLS
TATLLTATTTTTTAAAADTTAVSSKQSSPAPASSSSATVELVVPLGNKGAGEKRSAVQLP
TDADSDEDDKLQQPQQKRSKSAKLDALFGSEDVDLRRALPAKQPMLVTGGVIVVEDDSMD
NWEVNKQTAKPLSPVKKPTLDELRAKLAKTVRHNNKLSKLDKSKDHVVAQRLKLLSELKS
NDDSQEAHDEKMRTILSQAQEMFENHGMNQEQYKDLVTKVVVMNESSKGLKEMRRREAAA
AAVNNDEDDLEMERNAARDAVLRKRIPKLKGNENHHQHATGSPRSDGEPRYEEQQPEKLQ
QQQQQAPPKQTKTKRDGKRRKPSKWGEQVDPAAAQRAAWQLQQQQQQQQQNNNNNNNNNK
RMPQSNILPGGGGFRGMPWQHPPLVMQQAVAPPPPQPPSMLTMPPVPPVVNITKAINSLD
NPMADVVRSITIDGGSKEIRFYNQVAIIFMDGDEPHEIGFQQGQRAIYIDHNNEPLALSF
NDDYKPFQLDGQLHRIRFGHPSRELYIDDHWYEIYFGGPPVSLPIGNKLHVLKAEGPPPN
VDIGRVRRDLVVGKINMIVDAHTIVPLFLDGRQQTFHLGAEQHSLQFVDSFLYALLDGQL
QKLEYGGLPKSMKLNGGRNCFIRFGTLPKSVQAGKTHVQDMVYIKTEAPAEPPQPPPLPV
VIAPAQPPPIVNPLEQQQPAVADVASAVSLPDATAALSNLNIDELFKKLVSSGIIGAPAA
ATVTATTAAGVGANKPVSSLPALEASSTVSKDAAAVAAPSTEEPIKRIDLQKPDTIKTRQ
AAVIATLYLGMQCSSCGVRFPPEQTIKYSQHLDWHFRQNRRERDSTRKTTSSRWFYDLND
WRQYEEIEDIEERERNFLESQGQQLGGLGPNDGSDEVSQQRSLDSPVPSCAAGAEDVDRS
CDMCHERFEQFYNEELEEWHLRSAIRVDEKTYHPLCYEDYKASLNPPAPVVGVITDGVES
SQANGDVDMLNLSDDNAMDTLIKLEDDSDDGKKMLSVDDDDDDDVIVLPNEEPSVTEIVD
DDDDEEYVPATVTRTAETELGDSDEQKDKPTATSSSPSGEQDQQQQQEKDNELEKKELDK
KNANESDVDVEIQEPNIPFTDLDTYVEKEPMPMLQVKIKEEPKDDDEEDEDDGFEDVGTV
VQLLPLPEDEISIHSSETQTQTIESSASPATLERPASVASLSLPAANEDELELESLAAAT
TEADFNGENAQEAHNLSAAGLAPALPLASIVNKIKINITKNTSSNSHNSASTTTTTTTMT
PMTSADSSQVSAISVIGYSANADGQHQQQQQQNSIQTISTIPVLCGGNTFVPKIATSSSN
CSTNAPPSNISSISVIGSTYGSSNNNSSGSNNGATHTTTSSMGGPGAATAAATSGTSSAA
GQKSTTPPPPKAAVEAIDPEPVIELKPALRNVTLKKTKKVQNGVETSGLCSIM
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atggaacatatattgcaatcgtatccagaggatgcgcgccgcattggcgaagagtatttg
tccagtttgacggatttgaattgcaatagcaagccgctcatcaatatgctcacaatgctc
gccgaggagaacatcaactttgcccaaatcattgtgcgcgtggtggaatatcatatcagc
caggtgccgcccgaattcaaattgcccatactatatttaattgattcgataattaagaat
gtgaaaagcagctacgtccagctgtttgggcaatgcatagtcaatatatttctcaacgcc
ttcgaatcggtgcaacattcgccgtcgtcggtgctggagaaggtgcgcgaacgtatgtat
ttgctgcgccagacatggaatgaggtcttcccgccgaccaagatgtatgcgctggatgtg
aaggtcaagcgactggacaacaattggcccattacagccaaaccgatacagccaaataaa
atccacgttaatcccgccatacacgtcaatcccgattttctaaaaacaggcatggtgagt
atgccccttaccaaggagctaccaatggaggaaatgctgcaggtgaagacgcgagagctg
cttgagctgaagaagcgcaagctcgaactcgaattggagcagacgaatatgcatttaatg
cagcaggagcgtcaaatacatcaaacagcggatacgattggtgtggcgccgccgggcatg
ggtatgccagcaccagtcgtcgctgcactgcgtccacctggcatggaaccggcagcaacc
gtcgtcccacccatgtatcccggcagcagcattcgtccacccgttcgtcccatgatgcca
gttgtcggccaacaatcgtcttttgccaataagcccaaagtgcatccagtcaatccggct
atggtgaatacggtgcgtccacgtgatccacgtctggcgcgccaaatgcagccacaacag
atggcagcgcccgtaatgcgtagcgtcgctgatccccggctggtggacggcagccacaaa
tcaggctcggccatttcagcacacaaatctagtcgatcgcgcagcaagtcaccaacgcgc
agcagtagcaagagcaagtccagcagcagcagcaatcatcacagctccagctcgagcaat
cgcaagcgtagcgaatccaagagctccacatcatcctcgggctcgggcgatggcaccaga
cataagattagcaacatcagcagccagtcgccgacaaagcgttcgtccagctcacgctat
gctcacaatggcaatggcaactcgccggcatcctcctccaccacttcctcctcatcaaaa
cgcaagagcagctcaccagcggccgccagcagtagcagcaactcacccctgaaatcgatg
aagcgcaatcaaagcacacacaacaaaaatacacacacaacgagtcgcagcaaatcctcc
gccgccagcaatgagcgatcttctcgcagtcgatcgccagtgtacagcagggatgtggat
atgcgtagcgtggagcgtagtaaatcaccagagccaaaagcagcaacagcaacacaagga
gcaactccagcagcagcagctccttcaacagaaacaactcagccagaagcaacagcagca
gctccagcaaatgatttagagaaacgcccacgtccttccacgtcgccgcatatagatgca
tctagcatggacgtcgatttgcggccaatgaattttgctcagttggccgcgttgtcgtct
ataattaggccaacaacgccgccgccgccggccataacaacagcaactgtcagcaaaaaa
gcgacaacaacaactatcacagcagacaccagcagcacaacaacaaatgctagcagcgcc
tccaacgcaacagcaacaacaacatcgaacagttgttcctcctccaaattgcccacaaaa
gtgtcgttcaaaatacaaaaaccgtttaataaattagaaaaatctacagcgaatttatca
acagcaacactgctaacagcaacaacaacaactacaacagcagcagcagcagatacaaca
gccgtaagcagcaagcaatcctcgccagcgcccgcctcatcctcctccgccacggtagag
ttggtggtgccacttggcaataagggcgccggcgagaaacgctcggctgttcagctgcca
acggatgccgactcggatgaggatgataaactgcagcagccacagcagaaacgcagcaaa
tccgccaaactggatgctctgtttggcagcgaggatgtggatttaaggcgagcgttgccc
gccaagcaacctatgcttgtgaccggtggcgttatcgtcgtcgaagatgactccatggac
aattgggaagtgaataagcaaacggcgaaaccgctgtcgcccgtcaagaagcccacgttg
gatgagctgcgtgccaagctggccaagacggtacgacacaacaacaagctgtccaagttg
gataagagtaaagatcatgttgtggcgcagcgtctgaagctgctgtcggagctgaagtcc
aacgatgattcgcaggaggcgcacgacgagaagatgcgcacgatacttagtcaggcccag
gagatgttcgagaatcatggcatgaatcaggaacagtacaaggatctagtcaccaaagtg
gttgtcatgaatgagagcagcaaaggactgaaggaaatgcggcgacgcgaagcagccgcc
gccgcagttaataatgacgaagatgatctcgaaatggaacgaaatgcggcacgtgatgca
gtgctgcgcaagcggatacccaagctcaagggcaatgagaatcatcatcagcatgccaca
ggctcgccacgcagcgatggtgaaccacgctacgaggagcagcagccggagaaattacag
cagcaacagcagcaggcgccgccaaagcaaacgaaaaccaaacgggatggcaagcgacgc
aagccgagcaagtggggcgaacaggtggatccggcagcagcgcaacgtgccgcctggcaa
ctgcagcaacaacagcagcagcaacaacaaaacaacaacaataataataacaacaacaag
cgcatgccgcaatcgaatatcttgcctggtggcggcggttttcgtggcatgccctggcaa
catccccctttggttatgcaacaagctgtcgcaccaccaccaccacaaccaccatcgatg
ctaacaatgccaccagtgccgcccgtcgttaacatcaccaaagccatcaattcgttggat
aatcccatggcggatgtggtgcgcagcatcaccatcgatggtggcagcaaagagatacgc
ttctacaatcaggttgccatcatattcatggatggcgatgagccgcacgagattggcttt
cagcaaggccagcgtgccatttatattgatcataacaatgaaccgttggcgcttagtttt
aatgatgactataaacccttccagctggatggacaattacatcgcatacggtttggacat
ccatcgagggagctctacattgatgatcattggtatgagatctattttggcggaccaccc
gtttcgctgcccattggtaataagctgcatgtgctcaaggcggagggaccaccgcccaat
gttgatattggacgagtgcgtcgtgatcttgtcgtcggcaagatcaatatgattgtggat
gcgcacacaattgtgccactttttctcgatggacgccagcagacgttccatttgggcgcc
gaacaacattcgttgcagtttgtcgacagttttctgtatgccctgctcgatggccagctc
cagaagctggagtatggtggcctgcccaagagcatgaagctgaatggcggtcgcaattgt
ttcatacgctttggcacgctgcccaagagtgtgcaggcgggcaagacccatgtgcaagac
atggtctatattaaaactgaggcgcccgcagagccacctcaaccgccacctctgccagtg
gtgattgcaccagcgcaaccaccaccgatagttaatcctctcgagcaacagcagccagct
gtggcagatgtggcttctgcggtttcattgcctgatgcgacagcagcgctgagtaatctt
aacattgatgagctcttcaagaagctcgtctcctcgggcataattggtgcgccagcagca
gcaacagttacagcaacaacagcagcaggagtcggtgccaacaaaccagtcagcagtttg
cctgctctcgaggccagctccactgtcagcaaagatgcagctgctgtagcagcaccatca
acggaggagcccatcaagcgcattgacctccagaagccggatacgattaagacgcgacag
gcggctgttattgccacactatatttgggaatgcagtgcagcagttgtggcgttcgcttt
ccacccgagcagaccatcaagtacagtcagcacttggattggcatttccgacaaaatcga
cgcgaaagggattccacacgcaagacaacatcgagtcgttggttctacgatctcaatgat
tggcgacagtacgaggagatcgaggacatcgaggagcgggagcgtaactttctggagtcg
cagggccaacagttgggtggtctgggtcccaacgatggcagcgatgaggtgtcgcagcaa
cgttccctggattcaccggtgcccagttgtgccgccggtgctgaggatgtcgatcgcagc
tgtgacatgtgccacgagagattcgaacagttctacaacgaagagctggaggaatggcat
ctgcgttctgccattcgtgtcgacgagaaaacctatcatccgttgtgttatgaggattac
aaggcatcgctaaatccaccagcgcccgtcgtgggcgtcatcactgatggcgttgaatct
tcacaagccaatggcgatgtggatatgttgaacctaagcgatgataatgccatggatacg
ctcatcaagttggaggatgattcggatgatggcaaaaagatgctgagcgtagacgatgat
gatgacgatgatgtaatcgtgctgcccaatgaggagccgagcgttaccgaaatcgttgac
gatgatgatgatgaggaatatgtgccggcaactgtgacaagaactgctgaaacggagctg
ggcgacagcgatgagcagaaggataaaccaacagcaaccagctcctcccccagcggcgaa
caagaccagcagcagcagcaagagaaagataatgagttagagaagaaggaactggataaa
aagaatgccaacgaatcggatgtagatgtggagatccaggagccaaacattcccttcaca
gatctggatacctacgtcgaaaaggagcccatgcccatgctccaagtgaagataaaagag
gagcccaaagatgatgacgaggaggacgaggacgatggctttgaagatgtgggcactgtg
gtgcaattgctgccactgccagaagatgaaatctcgatacacagtagtgaaacgcaaacg
caaaccattgaatcatctgcgtcgccggcaacgctggagcgtcccgcttcggtggcatcg
ctctcattgccagctgcgaatgaggatgaactggaactggagtccttagcggcggcaaca
actgaggctgattttaacggtgagaatgcgcaggaggcacacaatctgagcgcagcgggt
ttggcgccggcattacctttggctagcatagttaataaaataaaaataaatatcactaag
aacacaagtagtaatagtcataatagtgcctcaacaaccacaacaacaacaacgatgacg
ccgatgacgtcagcggactcctcgcaagtgtcggccattagtgtgattggctactctgcc
aatgccgatgggcagcaccaacagcagcagcagcaaaattcaatacaaaccatttccacg
attccagtgttgtgcggcggcaacacatttgtaccgaagattgccactagcagcagcaat
tgttccacaaatgcgccgccatccaatattagttccatttccgttattgggagcacttat
ggcagcagcaacaacaacagcagcggcagcaacaatggcgccacgcacacaacaacatca
tcgatgggcgggccaggagcagcaacagcagcagctacttccggtacgtcgtctgctgct
ggtcaaaaatcgacaactccaccgcccccaaaagctgctgtcgaagctatcgatcccgaa
cctgttatcgaactgaagcctgcgctgcgaaatgtgacgttgaagaagacaaagaaagtt
caaaatggcgtcgaaacttccggcttgtgctccatcatgtaa
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integrated database retrieval system
