Dendronephthya gigantea (soft corals): 114515758
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Entry
114515758 CDS
T06112
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03020
RNA polymerase
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114515758
09124 Replication and repair
03420 Nucleotide excision repair
114515758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114515758
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114515758
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114515758
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114515758
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114515758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
114515758
NCBI-ProteinID:
XP_028390851
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MFDPDDDGAYGDEEGEEITPDLWQEACWIVISSYFEEKGLVRQQLDSFDEFIQMSVQRIV
EDSPEIELQAESQHMTSDMEEPPKYTLKFEQIYLSKPTHWEKDGAPTAMMPNEARLRNLT
YSAPLYVDITKTMHKEGQEPQVQENGKTFIGKIPIMLRSTYCLLSNLLDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYSYTAEIRSCIEHSSRPTSTMWVSM
LAKGSQGGKKSAIGQRIIATLPYIKQEIPVMIVFRALGFVADRDILEHIIYDFEDQEMME
LVKPSLDEAFVVQEQNVALNFIGTRGARPGVTKERRIKYAREILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYA
QKFIDKGKDFNLELAIKTKTITDGLKYSLATGNWGDQKKAHQTRAGVSQVLNRLTFASTL
SHLRRLNSPIGREGKLARPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGSQPS
PILEFLEEWTMENLEEITPSAIHNATKIFVNGCWVGIHRDPDQLMSTLRKLRRQMDIVVS
EVSMVRDFREKEIRIYTDAGRICRPLLIVENQKLLLKKQHIEMLKEREYNEYGWQDLVAN
GVVEYIDVNEEESVMVAMTPEDLIDKGVIYCSTYTHCEIHPSMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINAI
VAIASYTGYNQEDSVIMNASGIDRGLYRSVFYRSYREQESKKGLESEELFERPSREECQG
MRNAIYDKLDDDGLIAPGTRVSGDDVVIGKTMTLPEIEDEFQSSNRRFTKKDASTFLRAS
ETGIVDQVLVTINQDGNKFTKVKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPFTCE
GITPDVIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISQLLAEYG
YHLRGNEVLYNGFTGRKMNAQVFIGPTYYQRLKHMVDDKIHSRARGPLQILTRQPMEGRS
RDGGLRFGEMERDCQISHGAAQFLNERLFECSDAYSCHVCDLCGLIAIANLRNNTYECRG
CKNKTQISRIRIPYAAKLLYQELMSMSISPRMMTVEPVK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacccagatgatgatggtgcatatggtgatgaagagggtgaagaaattacccca
gatttatggcaggaggcatgttggattgtcatcagctcatattttgaggagaaaggcctg
gtcaggcaacaacttgattcatttgatgagttcattcagatgtcagttcagagaattgtt
gaggattcacccgagattgagttgcaagcggaatcacaacatatgacttcagatatggaa
gaacctccaaagtacaccttgaagtttgagcaaatttacctttcaaagccaactcactgg
gagaaagatggtgctcccacagctatgatgcctaatgaagcaagacttcgaaatctgacg
tactctgctccgctgtatgttgatattacaaagacaatgcataaggaaggccaggaacct
caagtccaagaaaatggcaaaacatttattgggaaaatcccaatcatgcttcgttctacg
tactgtttgctaagtaacctcttagatcgtgatttgacagaacttaatgaatgtccatta
gaccctggtggttatttcattattaatggatctgagaaggttctgatagctcaagaaaag
atggcgacgaatactgtttatgtgttcgcaaagaaagactcgaagtactcctacactgcg
gaaattcggtcatgtattgaacattcgtctcggccaacaagcacaatgtgggtgtctatg
ctggctaaaggaagccagggtggaaagaagagtgctattggtcaacgtattattgcaaca
ttgccttacatcaaacaggaaattccagttatgatcgtgttccgagctctgggttttgtc
gcagatcgtgacattttggagcatattatttatgattttgaagatcaagaaatgatggaa
ttggtgaagccatccttggatgaggcatttgttgtccaagaacaaaacgttgcactcaac
tttattggaactcgtggagcaagaccaggggtgaccaaagaaagacgtatcaaatatgcg
cgcgaaattcttcagaaggaaatgcttccccacgttggtgtgagtgacttctgtgagaca
aagaaagcttattttcttgggtacatggtccatcgtttgttgctggcatctttgggaaga
agggagcttgatgatcgtgatcattatggcaacaagagactggatcttgctggaccactt
ttggcttttcttttccgaggtttatttcgtaatctcatgaaagaagttcgtctttatgct
caaaagttcattgataaaggcaaagactttaatttggagttggctattaaaaccaagacg
attacagatggtctgaaatactcccttgcgacaggaaattggggtgatcagaagaaagcc
caccaaacgagagctggagtatctcaggtcttgaatcgtctcacctttgcgtcaacgtta
tcccatttgaggcgtcttaactcacctattggtcgagaaggcaaacttgcaagacctcgt
cagttgcataacactcattggggtatgatatgcccagccgagaccccagaaggccatgct
gtgggactggtgaagaatctagccttgatggcgtatatatcagtcggttctcagcccagt
cctatcttggagttcttggaagaatggaccatggagaatctggaggaaattacaccatct
gcaattcataatgctaccaagatctttgtgaatggatgctgggttggaatccatcgagat
cctgatcaacttatgtcaactttacgaaaactgcgacgacagatggacatcgttgtgtca
gaggtttcaatggtacgcgatttccgagaaaaggagattcgaatttacaccgacgctggt
cgtatctgtcgacctctattgatcgttgagaaccagaaactgcttttgaagaagcaacat
atagaaatgttgaaagaaagagagtacaacgaatatgggtggcaagacttggtagccaat
ggcgttgtggaatatattgatgtgaacgaggaggaatcagtgatggttgccatgacgcca
gaagatttgattgacaaaggcgtgatttattgttcaacctacactcattgtgaaatccat
ccctcaatgatccttggtgtctgtgcttcaattataccatttccagatcacaatcagtct
cctcgtaacacataccagtccgctatgggtaaacaagccatgggagtgtacatcacgaac
ttccatgtacgtatggatacacttgcacatgtcctctactatccacaaaagccgctggtt
accactcgttctatggagtatcttcgtttcagagagttgcccgctggtattaacgctatt
gttgcaatcgcctcttacactgggtacaatcaagaagattctgtcatcatgaatgcttcg
ggaattgaccgtggtttgtacaggtccgtgttttatcgttcttatcgcgaacaagaatct
aagaagggtttggagtcggaagaactgtttgaaagaccttccagggaggaatgtcaaggc
atgcgcaatgcaatctacgacaagcttgacgacgacggacttatcgccccaggaacacgc
gtcagcggtgatgatgttgtcattggtaaaactatgacacttccagaaattgaggacgag
tttcaaagcagcaacagacgtttcacgaagaaagatgccagtacgtttctgagagcgagc
gaaactggcattgtagatcaagttcttgtcacaataaaccaagatggtaacaagtttaca
aaagtcaaggttcggtccgtacgggttcctcagattggggataagtttgccagtcgtcat
ggacaaaagggaacatgcgggataacctacagacaagaggacatgccattcacctgtgaa
ggaattacacctgatgtcattataaatcctcacgccatcccaagtcgtatgacaatcggt
catttgattgaatgccttcagggaaaggtctcggccaataaaggagagattggagatgct
acgccatttaatgatgctgtaaatgtacagaaaatctcccagcttcttgctgagtatggc
taccatttgagaggaaatgaggttctatacaacggttttactggtaggaaaatgaacgct
caagtgttcattggaccaacatattatcagcgtctcaaacacatggtggatgacaagatt
cattctcgagcaagaggacccttgcagatactcacgagacaacccatggagggtagatca
cgcgatggtggtttgcgttttggtgaaatggaacgggattgtcaaatctctcatggcgca
gctcagtttcttaatgaacgtttgtttgaatgttcagatgcatacagctgccatgtttgt
gatctttgcggtctgattgccatcgcaaatctcagaaataacacatacgagtgccgtgga
tgcaaaaacaagacacagatttctcgtattcgtattccttatgcggcaaagttgctctac
caggagctcatgtcaatgtcaatctctccacgtatgatgactgtggagcctgtaaaataa
DBGET
integrated database retrieval system
