Dendronephthya gigantea (soft corals): 114516024
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Entry
114516024 CDS
T06112
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114516024
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114516024
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
Pre-60S particles
Helicases
114516024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
DnaI_N
Motif
Other DBs
NCBI-GeneID:
114516024
NCBI-ProteinID:
XP_028391173
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MADENVQKEVKHFHEFGLDDRLLKAISKLKWSKPTAIQESAIPLAIEGKDILARAKTGSG
KTAAYAIPIIQKILQEKKTNQSEGSVKALILVPTKELSQQACKNVKDLTSYCSRSVRVVD
VAQATLDVVRPILLERPDIVIGTPSRVLAHLQAKDLELKETLKMLVVDEADLVFSYGYEY
DLKTLLSHLPKIYQAFLMSATLSEEVKELKKIVLQNPVTLKLDISDLPEESSLKQYLIKC
EADDKFLLVYTLLKLKLVLGKTLIFVNGIDRCYRLKLFLEQFSIKTCVLNSELPHNSRCH
IVEEFNKGIYDYIIATDENIDSAKSSKPHKNVNKASEYGVSRGIDFQDVENVLNFDFPKT
VENYVHRVGRTARGHNTGNALSLVTSSDDKMITAVEERLSPNFASANERIFKPFKFKMEE
IEGFRYRAQDALRAVTKASVREARLKEIKSEILNSEKLKAFFEDNPRDLQLLKHDKDLHP
AKIQPHLKHVPDYLVPDTLKPTMTNSQRRKRSYVSFHKHQKNSNKKQKLDPLRTFKATQK
SHENKKRRKSKR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaatgtgcaaaaagaagttaaacattttcacgagtttggccttgatgac
cgtcttttaaaggcaatttcgaagttaaagtggtcgaaacctacagcaattcaggaaagt
gccattcctttggcaattgaaggaaaggatattctcgctagagcaaaaacaggttcagga
aaaactgcagcgtatgctattccaattattcaaaaaatcctgcaggagaaaaagaccaac
caaagtgaaggatctgtgaaagcactgattttagttccaactaaggaattatctcaacaa
gcatgcaaaaacgtaaaggatcttacgtcatactgctctcggagtgtgcgtgttgtagac
gttgctcaagcaaccctggatgtggtcaggccaattctgttggaaagaccagatattgtt
attggtacaccaagtcgtgttttggcccatctccaggcaaaggatcttgaattgaaggaa
acgttaaaaatgttggttgttgacgaagctgacttggtgttctcatatggttatgaatac
gacttgaaaacattgttaagtcatctaccaaagatctatcaagcattcctaatgtccgcc
acgttatcagaggaagtaaaagagctcaagaaaattgtattgcaaaatcctgtgactttg
aaattagatatctctgatttgccagaagaaagcagtctaaaacaatatttaatcaaatgt
gaagctgatgacaaatttcttctggtttacaccctgttgaagttgaagcttgttcttgga
aaaacgttgatatttgtcaatggtattgatcgttgttacaggctgaagttatttctggaa
caattttcaatcaagacatgcgttcttaactcagaattaccacataattcacgatgtcat
attgtggaggaattcaacaaaggaatatatgactacatcattgcaacagatgaaaacatt
gattctgcaaaatcttcaaaacctcacaagaatgtaaataaagccagtgaatatggcgta
tctcgtggtattgactttcaagatgttgagaatgttctgaatttcgactttccaaaaacg
gttgaaaattacgttcacagagttggcaggacggctcgtggtcataataccggcaacgca
ctctcactagtgacgtcatccgatgacaaaatgattactgccgtggaagagcgattatct
ccgaactttgcgtcggcaaatgaacgcattttcaaaccgtttaagttcaaaatggaggag
attgagggttttcggtatcgtgcccaggatgctctgcgcgctgtaacgaaagcttcagtg
cgggaggcaagattgaaagaaattaagtcggaaatattaaattcagaaaaattaaaggct
ttctttgaagacaatccgcgagatttgcagcttctgaaacatgataaagatcttcatcct
gcgaagattcaaccgcacctaaaacacgtcccggattatctggttcctgatacgctgaaa
ccaacaatgaccaattctcaacgacgaaaaagaagctacgtttccttccataaacaccag
aaaaatagcaacaagaaacaaaaactagacccactgcgtacctttaaggcaactcaaaaa
tctcacgaaaataagaaacgacggaaaagtaaacgctga
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